RNA–Protein interactions for RNA: ENST00000394886.6

CDC23-202, Transcript of cell division cycle 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC23, Length 3,155 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC23-202ENST00000394886 FAT1Q14517 4588 aa2.75□□□□□ -1.97
CDC23-202ENST00000394886 RYR3Q15413 4870 aa2.75□□□□□ -1.97
CDC23-202ENST00000394886 RPL37P61927 97 aaKnown RBP2.75□□□□□ -1.97
CDC23-202ENST00000394886 KRTAP3-1Q9BYR8 98 aa2.73□□□□□ -1.97
CDC23-202ENST00000394886 KRTAP1-4P0C5Y4 121 aa2.73□□□□□ -1.97
CDC23-202ENST00000394886 KRTAP13-4Q3LI77 160 aa2.72□□□□□ -1.97
CDC23-202ENST00000394886 APOBP04114 4563 aaKnown RBP2.72□□□□□ -1.97
CDC23-202ENST00000394886 KRTAP17-1Q9BYP8 105 aa2.71□□□□□ -1.98
CDC23-202ENST00000394886 KRTAP10-4P60372 401 aaPredicted RBP2.69□□□□□ -1.98
CDC23-202ENST00000394886 LUZP6Q538Z0 58 aa2.69□□□□□ -1.98
CDC23-202ENST00000394886 KRTAP15-1Q3LI76 137 aa2.69□□□□□ -1.98
CDC23-202ENST00000394886 KIAA1109Q2LD37 5005 aa2.69□□□□□ -1.98
CDC23-202ENST00000394886 Q5VSD8 79 aa2.68□□□□□ -1.98
CDC23-202ENST00000394886 EPPK1P58107 5090 aaKnown RBP2.68□□□□□ -1.98
CDC23-202ENST00000394886 S4R3F8 94 aa2.66□□□□□ -1.98
CDC23-202ENST00000394886 HSPG2P98160 4391 aa2.66□□□□□ -1.98
CDC23-202ENST00000394886 LRP1Q07954 4544 aaKnown RBP2.66□□□□□ -1.98
CDC23-202ENST00000394886 KRTAP12-2P59991 146 aa2.65□□□□□ -1.99
CDC23-202ENST00000394886 RYR1P21817 5038 aa2.64□□□□□ -1.99
CDC23-202ENST00000394886 KRTAP10-6P60371 365 aaPredicted RBP2.63□□□□□ -1.99
CDC23-202ENST00000394886 KRTAP4-5Q9BYR2 181 aa2.63□□□□□ -1.99
CDC23-202ENST00000394886 PKHD1L1Q86WI1 4243 aa2.61□□□□□ -1.99
CDC23-202ENST00000394886 MYCBP2O75592 4640 aa2.6□□□□□ -1.99
CDC23-202ENST00000394886 KRTAP10-8P60410 259 aa2.59□□□□□ -1.99
CDC23-202ENST00000394886 KRTAP3-2Q9BYR7 98 aa2.58□□□□□ -2
CDC23-202ENST00000394886 KRTAP12-1P59990 96 aa2.57□□□□□ -2
CDC23-202ENST00000394886 KRTAP3-3Q9BYR6 98 aa2.57□□□□□ -2
CDC23-202ENST00000394886 TNXBP22105 4242 aa2.57□□□□□ -2
CDC23-202ENST00000394886 MT1HL1P0DM35 61 aa2.56□□□□□ -2
CDC23-202ENST00000394886 PLAC4Q8WY50 150 aa2.56□□□□□ -2
CDC23-202ENST00000394886 FAT3Q8TDW7 4589 aa2.56□□□□□ -2
CDC23-202ENST00000394886 RPS29P62273 56 aaKnown RBP2.55□□□□□ -2
CDC23-202ENST00000394886 M0QZ58 72 aa2.53□□□□□ -2
CDC23-202ENST00000394886 ABCA13Q86UQ4 5058 aa2.52□□□□□ -2.01
CDC23-202ENST00000394886 XP32Q5T750 250 aa2.52□□□□□ -2.01
CDC23-202ENST00000394886 J3QL48 77 aa2.51□□□□□ -2.01
CDC23-202ENST00000394886 BIRC6Q9NR09 4857 aa2.5□□□□□ -2.01
CDC23-202ENST00000394886 HERC2O95714 4834 aa2.5□□□□□ -2.01
CDC23-202ENST00000394886 R4GN34 69 aa2.49□□□□□ -2.01
CDC23-202ENST00000394886 LPAP08519 4548 aa2.49□□□□□ -2.01
CDC23-202ENST00000394886 LRP2P98164 4655 aa2.46□□□□□ -2.02
CDC23-202ENST00000394886 CAMK2N1Q7Z7J9 78 aa2.45□□□□□ -2.02
CDC23-202ENST00000394886 PCLOQ9Y6V0 5065 aa2.44□□□□□ -2.02
CDC23-202ENST00000394886 LORP23490 312 aaPredicted RBP2.41□□□□□ -2.02
CDC23-202ENST00000394886 HERC1Q15751 4861 aa2.4□□□□□ -2.02
CDC23-202ENST00000394886 KRTAP4-1Q9BYQ7 146 aa2.37□□□□□ -2.03
CDC23-202ENST00000394886 LCE2DQ5TA82 110 aaPredicted RBP2.35□□□□□ -2.03
CDC23-202ENST00000394886 MUC2Q02817 5179 aa2.35□□□□□ -2.03
CDC23-202ENST00000394886 SEC61BP60468 96 aaKnown RBP2.35□□□□□ -2.03
CDC23-202ENST00000394886 HMCN2Q8NDA2 5059 aa2.31□□□□□ -2.04
CDC23-202ENST00000394886 MUC17Q685J3 4493 aa2.3□□□□□ -2.04
CDC23-202ENST00000394886 RNF213Q63HN8 5207 aa2.29□□□□□ -2.04
CDC23-202ENST00000394886 PP632Q6XCG6 107 aa2.28□□□□□ -2.04
CDC23-202ENST00000394886 UBR4Q5T4S7 5183 aa2.28□□□□□ -2.04
CDC23-202ENST00000394886 LOC100996750A0A140TA64 210 aa2.28□□□□□ -2.04
CDC23-202ENST00000394886 KRTAP4-6Q9BYQ5 205 aa2.28□□□□□ -2.04
CDC23-202ENST00000394886 TNP1P09430 55 aa2.27□□□□□ -2.05
CDC23-202ENST00000394886 FSIP2Q5CZC0 6907 aa2.26□□□□□ -2.05
CDC23-202ENST00000394886 KRTAP19-2Q3LHN2 52 aa2.25□□□□□ -2.05
CDC23-202ENST00000394886 FAT4Q6V0I7 4981 aa2.24□□□□□ -2.05
CDC23-202ENST00000394886 PRO2289Q9P1D8 64 aa2.22□□□□□ -2.05
CDC23-202ENST00000394886 LCE2CQ5TA81 110 aa2.2□□□□□ -2.06
CDC23-202ENST00000394886 M0R2T5 61 aa2.2□□□□□ -2.06
CDC23-202ENST00000394886 FLGP20930 4061 aaPredicted RBP2.19□□□□□ -2.06
CDC23-202ENST00000394886 MT1HP80294 61 aa2.16□□□□□ -2.06
CDC23-202ENST00000394886 LCE3AQ5TA76 89 aa2.15□□□□□ -2.06
CDC23-202ENST00000394886 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
CDC23-202ENST00000394886 INE1O15225 51 aa2.1□□□□□ -2.07
CDC23-202ENST00000394886 KRTAP10-10P60014 251 aa2.1□□□□□ -2.07
CDC23-202ENST00000394886 MT2AP02795 61 aa2.09□□□□□ -2.08
CDC23-202ENST00000394886 MT1FP04733 61 aa2.09□□□□□ -2.08
CDC23-202ENST00000394886 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.08
CDC23-202ENST00000394886 KRTAP9-8Q9BYQ0 159 aa2.08□□□□□ -2.08
CDC23-202ENST00000394886 KRTAP19-1Q8IUB9 90 aa2.05□□□□□ -2.08
CDC23-202ENST00000394886 LCE2AQ5TA79 106 aaPredicted RBP2.02□□□□□ -2.09
CDC23-202ENST00000394886 KRTAP23-1A1A580 65 aa2.01□□□□□ -2.09
CDC23-202ENST00000394886 SPRR2GQ9BYE4 73 aa2.01□□□□□ -2.09
CDC23-202ENST00000394886 KRTAP12-3P60328 96 aa2.01□□□□□ -2.09
CDC23-202ENST00000394886 KRTAP9-3Q9BYQ3 159 aa2□□□□□ -2.09
CDC23-202ENST00000394886 USH2AO75445 5202 aa1.98□□□□□ -2.09
CDC23-202ENST00000394886 LCE2BO14633 110 aa1.97□□□□□ -2.09
CDC23-202ENST00000394886 MT1BP07438 61 aa1.97□□□□□ -2.09
CDC23-202ENST00000394886 KRTAP10-12P60413 245 aa1.96□□□□□ -2.1
CDC23-202ENST00000394886 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
CDC23-202ENST00000394886 KRTAP19-8Q3LI54 63 aa1.95□□□□□ -2.1
CDC23-202ENST00000394886 KRTAP8-1Q8IUC2 63 aa1.95□□□□□ -2.1
CDC23-202ENST00000394886 KMT2DO14686 5537 aa1.95□□□□□ -2.1
CDC23-202ENST00000394886 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
CDC23-202ENST00000394886 KRTAP4-8Q9BYQ9 185 aa1.94□□□□□ -2.1
CDC23-202ENST00000394886 KRTAP10-7P60409 375 aaPredicted RBP1.92□□□□□ -2.1
CDC23-202ENST00000394886 KRTAP10-5P60370 271 aa1.91□□□□□ -2.1
CDC23-202ENST00000394886 MT1XP80297 61 aa1.91□□□□□ -2.1
CDC23-202ENST00000394886 KRTAP4-7Q9BYR0 210 aa1.88□□□□□ -2.11
CDC23-202ENST00000394886 KRTAP19-5Q3LI72 72 aa1.88□□□□□ -2.11
CDC23-202ENST00000394886 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.86□□□□□ -2.11
CDC23-202ENST00000394886 SSPOA2VEC9 5147 aa1.86□□□□□ -2.11
CDC23-202ENST00000394886 KRTAP9-2Q9BYQ4 174 aa1.86□□□□□ -2.11
CDC23-202ENST00000394886 KRTAP4-8A0A0G2JLE6 195 aa1.85□□□□□ -2.11
CDC23-202ENST00000394886 KRTAP9-6A8MVA2 160 aa1.85□□□□□ -2.11
CDC23-202ENST00000394886 LCE3CQ5T5A8 94 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms