RNA–Protein interactions for RNA: ENST00000394849.1

UPK3B-203, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 1,041 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-203ENST00000394849 MDN1Q9NU22 5596 aa8.92□□□□□ -0.98
UPK3B-203ENST00000394849 KMT2DO14686 5537 aa8.92□□□□□ -0.98
UPK3B-203ENST00000394849 KRTAP10-5P60370 271 aa8.91□□□□□ -0.98
UPK3B-203ENST00000394849 KRTAP3-1Q9BYR8 98 aa8.91□□□□□ -0.98
UPK3B-203ENST00000394849 FAM236AA0A1B0GUQ0 79 aa8.9□□□□□ -0.98
UPK3B-203ENST00000394849 FAM236BA0A1B0GV22 79 aa8.9□□□□□ -0.98
UPK3B-203ENST00000394849 KRTAP2-3P0C7H8 128 aa8.89□□□□□ -0.99
UPK3B-203ENST00000394849 KRTAP19-8Q3LI54 63 aa8.89□□□□□ -0.99
UPK3B-203ENST00000394849 KRTAP2-4Q9BYR9 128 aa8.89□□□□□ -0.99
UPK3B-203ENST00000394849 S4R3F8 94 aa8.88□□□□□ -0.99
UPK3B-203ENST00000394849 SPRR2GQ9BYE4 73 aa8.86□□□□□ -0.99
UPK3B-203ENST00000394849 K7ERU9 68 aa8.85□□□□□ -0.99
UPK3B-203ENST00000394849 C5orf47Q569G3 176 aa8.84□□□□□ -0.99
UPK3B-203ENST00000394849 OCR1Q9BZK8 76 aa8.84□□□□□ -0.99
UPK3B-203ENST00000394849 MP68P56378 58 aa8.83□□□□□ -1
UPK3B-203ENST00000394849 LINC00208Q96KT6 92 aa8.83□□□□□ -1
UPK3B-203ENST00000394849 SCGB1A1P11684 91 aa8.82□□□□□ -1
UPK3B-203ENST00000394849 LCA10Q71F78 164 aa8.79□□□□□ -1
UPK3B-203ENST00000394849 CSAG1Q6PB30 78 aa8.78□□□□□ -1
UPK3B-203ENST00000394849 IMUPQ9GZP8 106 aa8.75□□□□□ -1.01
UPK3B-203ENST00000394849 MT-ATP8P03928 68 aa8.74□□□□□ -1.01
UPK3B-203ENST00000394849 KLKP1Q107X0 134 aa8.71□□□□□ -1.02
UPK3B-203ENST00000394849 H3BPC8 53 aa8.7□□□□□ -1.02
UPK3B-203ENST00000394849 A8MUN3 132 aa8.67□□□□□ -1.02
UPK3B-203ENST00000394849 KRTAP3-3Q9BYR6 98 aa8.65□□□□□ -1.02
UPK3B-203ENST00000394849 NDUFC1O43677 76 aa8.61□□□□□ -1.03
UPK3B-203ENST00000394849 SPRR2EP22531 72 aa8.6□□□□□ -1.03
UPK3B-203ENST00000394849 SPRR2BP35325 72 aa8.6□□□□□ -1.03
UPK3B-203ENST00000394849 SPRR2AP35326 72 aa8.6□□□□□ -1.03
UPK3B-203ENST00000394849 SMIM20Q8N5G0 67 aa8.6□□□□□ -1.03
UPK3B-203ENST00000394849 SPRR2FQ96RM1 72 aa8.59□□□□□ -1.03
UPK3B-203ENST00000394849 TRAV7A0A075B6U4 112 aa8.57□□□□□ -1.04
UPK3B-203ENST00000394849 KRTAP2-2Q9BYT5 123 aa8.57□□□□□ -1.04
UPK3B-203ENST00000394849 KRTAP2-1Q9BYU5 128 aa8.57□□□□□ -1.04
UPK3B-203ENST00000394849 CRIPTQ9P021 101 aa8.57□□□□□ -1.04
UPK3B-203ENST00000394849 DMAC1Q96GE9 116 aa8.48□□□□□ -1.05
UPK3B-203ENST00000394849 PRO2289Q9P1D8 64 aa8.43□□□□□ -1.06
UPK3B-203ENST00000394849 H0YAA0 97 aa8.42□□□□□ -1.06
UPK3B-203ENST00000394849 LCE1AQ5T7P2 110 aa8.4□□□□□ -1.06
UPK3B-203ENST00000394849 SNURFQ9Y675 71 aa8.39□□□□□ -1.07
UPK3B-203ENST00000394849 ADM2Q7Z4H4 148 aa8.38□□□□□ -1.07
UPK3B-203ENST00000394849 KRTAP8-1Q8IUC2 63 aa8.38□□□□□ -1.07
UPK3B-203ENST00000394849 SERP2Q8N6R1 65 aa8.36□□□□□ -1.07
UPK3B-203ENST00000394849 ACYP2P14621 99 aa8.35□□□□□ -1.07
UPK3B-203ENST00000394849 SPRR2DP22532 72 aa8.33□□□□□ -1.08
UPK3B-203ENST00000394849 C20orf197Q8N268 126 aa8.33□□□□□ -1.08
UPK3B-203ENST00000394849 MT1XP80297 61 aa8.25□□□□□ -1.09
UPK3B-203ENST00000394849 CHKB-CPT1BH3BT56 60 aa8.24□□□□□ -1.09
UPK3B-203ENST00000394849 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
UPK3B-203ENST00000394849 SPTSSBQ8NFR3 76 aa8.24□□□□□ -1.09
UPK3B-203ENST00000394849 SPANXA2-OT1Q8N9U9 137 aa8.22□□□□□ -1.09
UPK3B-203ENST00000394849 P0C880 135 aa8.19□□□□□ -1.1
UPK3B-203ENST00000394849 PLAC4Q8WY50 150 aa8.19□□□□□ -1.1
UPK3B-203ENST00000394849 COX7CP15954 63 aa8.16□□□□□ -1.1
UPK3B-203ENST00000394849 LCE3BQ5TA77 95 aa8.16□□□□□ -1.1
UPK3B-203ENST00000394849 R4GN34 69 aa8.16□□□□□ -1.1
UPK3B-203ENST00000394849 KRTAP3-2Q9BYR7 98 aa8.12□□□□□ -1.11
UPK3B-203ENST00000394849 M0QZ58 72 aa8.11□□□□□ -1.11
UPK3B-203ENST00000394849 GPR98Q8WXG9 6306 aa8.08□□□□□ -1.12
UPK3B-203ENST00000394849 KRTAP4-8A0A0G2JLE6 195 aa8.05□□□□□ -1.12
UPK3B-203ENST00000394849 KRTAP4-8Q9BYQ9 185 aa8.05□□□□□ -1.12
UPK3B-203ENST00000394849 ANAPC13Q9BS18 74 aa8.01□□□□□ -1.13
UPK3B-203ENST00000394849 LINC01554Q52M75 96 aa8□□□□□ -1.13
UPK3B-203ENST00000394849 COA5Q86WW8 74 aa8□□□□□ -1.13
UPK3B-203ENST00000394849 H7BZZ5 65 aa7.97□□□□□ -1.13
UPK3B-203ENST00000394849 CYSTM1Q9H1C7 97 aa7.96□□□□□ -1.14
UPK3B-203ENST00000394849 KRTAP10-12P60413 245 aa7.86□□□□□ -1.15
UPK3B-203ENST00000394849 KRTAP10-7P60409 375 aaPredicted RBP7.84□□□□□ -1.15
UPK3B-203ENST00000394849 CCDC179H3BU77 68 aa7.82□□□□□ -1.16
UPK3B-203ENST00000394849 SEC61GP60059 68 aa7.82□□□□□ -1.16
UPK3B-203ENST00000394849 DSTQ03001 7570 aaKnown RBP7.8□□□□□ -1.16
UPK3B-203ENST00000394849 SERP1Q9Y6X1 66 aa7.8□□□□□ -1.16
UPK3B-203ENST00000394849 KRTAP13-4Q3LI77 160 aa7.72□□□□□ -1.17
UPK3B-203ENST00000394849 ATP5EP56381 51 aaPredicted RBP7.69□□□□□ -1.18
UPK3B-203ENST00000394849 KRTAP4-9Q9BYQ8 210 aa7.68□□□□□ -1.18
UPK3B-203ENST00000394849 A0A1B0GU33 70 aa7.63□□□□□ -1.19
UPK3B-203ENST00000394849 A0A1B0GU69 56 aa7.61□□□□□ -1.19
UPK3B-203ENST00000394849 A0A0D9SG42 100 aa7.58□□□□□ -1.2
UPK3B-203ENST00000394849 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
UPK3B-203ENST00000394849 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
UPK3B-203ENST00000394849 TMEM258P61165 79 aa7.55□□□□□ -1.2
UPK3B-203ENST00000394849 LCE5AQ5TCM9 118 aa7.55□□□□□ -1.2
UPK3B-203ENST00000394849 LCE1DQ5T752 114 aa7.47□□□□□ -1.21
UPK3B-203ENST00000394849 SPINT4Q6UDR6 99 aa7.47□□□□□ -1.21
UPK3B-203ENST00000394849 PRR15LQ9BU68 103 aa7.47□□□□□ -1.21
UPK3B-203ENST00000394849 KRTAP19-3Q7Z4W3 81 aa7.45□□□□□ -1.22
UPK3B-203ENST00000394849 SMIM26A0A096LP01 95 aa7.43□□□□□ -1.22
UPK3B-203ENST00000394849 LINC01558Q9Y6Z2 57 aa7.39□□□□□ -1.23
UPK3B-203ENST00000394849 KRTAP12-1P59990 96 aa7.38□□□□□ -1.23
UPK3B-203ENST00000394849 KRTAP19-7Q3SYF9 63 aa7.38□□□□□ -1.23
UPK3B-203ENST00000394849 LCE4AQ5TA78 99 aa7.37□□□□□ -1.23
UPK3B-203ENST00000394849 MT1EP04732 61 aa7.36□□□□□ -1.23
UPK3B-203ENST00000394849 HMCN1Q96RW7 5635 aa7.36□□□□□ -1.23
UPK3B-203ENST00000394849 A8MU10 97 aa7.34□□□□□ -1.23
UPK3B-203ENST00000394849 MT4P47944 62 aa7.3□□□□□ -1.24
UPK3B-203ENST00000394849 AHNAK2Q8IVF2 5795 aa7.27□□□□□ -1.24
UPK3B-203ENST00000394849 KRTAP5-10Q6L8G5 202 aa7.25□□□□□ -1.25
UPK3B-203ENST00000394849 MT1GP13640 62 aa7.24□□□□□ -1.25
UPK3B-203ENST00000394849 PP632Q6XCG6 107 aa7.22□□□□□ -1.25
UPK3B-203ENST00000394849 UQCR11O14957 56 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms