RNA–Protein interactions for RNA: ENST00000394310.7

CACNB1-203, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CACNB1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-203ENST00000394310 S4R3F8 94 aa10.92□□□□□ -0.66
CACNB1-203ENST00000394310 SPTSSBQ8NFR3 76 aa10.9□□□□□ -0.66
CACNB1-203ENST00000394310 LCA10Q71F78 164 aa10.9□□□□□ -0.67
CACNB1-203ENST00000394310 KRTAP3-3Q9BYR6 98 aa10.89□□□□□ -0.67
CACNB1-203ENST00000394310 Q1T7F1 81 aa10.81□□□□□ -0.68
CACNB1-203ENST00000394310 LCE2CQ5TA81 110 aa10.8□□□□□ -0.68
CACNB1-203ENST00000394310 V9GYY9 64 aa10.79□□□□□ -0.68
CACNB1-203ENST00000394310 FLGP20930 4061 aaPredicted RBP10.77□□□□□ -0.68
CACNB1-203ENST00000394310 LINC01558Q9Y6Z2 57 aa10.75□□□□□ -0.69
CACNB1-203ENST00000394310 CSAG1Q6PB30 78 aa10.73□□□□□ -0.69
CACNB1-203ENST00000394310 SVIPQ8NHG7 77 aa10.68□□□□□ -0.7
CACNB1-203ENST00000394310 FAT4Q6V0I7 4981 aa10.61□□□□□ -0.71
CACNB1-203ENST00000394310 A0A1B0GU69 56 aa10.57□□□□□ -0.72
CACNB1-203ENST00000394310 H0YAA0 97 aa10.56□□□□□ -0.72
CACNB1-203ENST00000394310 SEC61GP60059 68 aa10.56□□□□□ -0.72
CACNB1-203ENST00000394310 MT1HP80294 61 aa10.56□□□□□ -0.72
CACNB1-203ENST00000394310 PRR15LQ9BU68 103 aa10.55□□□□□ -0.72
CACNB1-203ENST00000394310 PSPHP1O15172 72 aa10.52□□□□□ -0.73
CACNB1-203ENST00000394310 Q5VV11 94 aa10.48□□□□□ -0.73
CACNB1-203ENST00000394310 KRTAP3-2Q9BYR7 98 aa10.47□□□□□ -0.73
CACNB1-203ENST00000394310 M0R2T5 61 aa10.45□□□□□ -0.74
CACNB1-203ENST00000394310 KRTAP10-6P60371 365 aaPredicted RBP10.44□□□□□ -0.74
CACNB1-203ENST00000394310 ADM2Q7Z4H4 148 aa10.42□□□□□ -0.74
CACNB1-203ENST00000394310 P0C880 135 aa10.34□□□□□ -0.75
CACNB1-203ENST00000394310 A0A1B0GU33 70 aa10.31□□□□□ -0.76
CACNB1-203ENST00000394310 LCE2AQ5TA79 106 aaPredicted RBP10.31□□□□□ -0.76
CACNB1-203ENST00000394310 UQCR11O14957 56 aa10.26□□□□□ -0.77
CACNB1-203ENST00000394310 A6NED7 52 aa10.21□□□□□ -0.77
CACNB1-203ENST00000394310 KRTAP9-8Q9BYQ0 159 aa10.19□□□□□ -0.78
CACNB1-203ENST00000394310 LORP23490 312 aaPredicted RBP10.16□□□□□ -0.78
CACNB1-203ENST00000394310 M0QZ58 72 aa10.15□□□□□ -0.78
CACNB1-203ENST00000394310 SPATA8Q6RVD6 105 aa10.14□□□□□ -0.79
CACNB1-203ENST00000394310 CRIPTQ9P021 101 aa10.13□□□□□ -0.79
CACNB1-203ENST00000394310 MT2AP02795 61 aa10.11□□□□□ -0.79
CACNB1-203ENST00000394310 MIR22HGQ0VDD5 57 aa10.11□□□□□ -0.79
CACNB1-203ENST00000394310 KRTAP13-4Q3LI77 160 aa10.09□□□□□ -0.79
CACNB1-203ENST00000394310 CDC42SE1Q9NRR8 79 aa10.07□□□□□ -0.8
CACNB1-203ENST00000394310 R4GN34 69 aa10.07□□□□□ -0.8
CACNB1-203ENST00000394310 MT1FP04733 61 aa10.04□□□□□ -0.8
CACNB1-203ENST00000394310 KRTAP10-10P60014 251 aa10.01□□□□□ -0.81
CACNB1-203ENST00000394310 BRK1Q8WUW1 75 aa10□□□□□ -0.81
CACNB1-203ENST00000394310 SPRR2GQ9BYE4 73 aa9.93□□□□□ -0.82
CACNB1-203ENST00000394310 A8MU10 97 aa9.92□□□□□ -0.82
CACNB1-203ENST00000394310 KRTAP19-1Q8IUB9 90 aa9.87□□□□□ -0.83
CACNB1-203ENST00000394310 A0A0D9SG42 100 aa9.83□□□□□ -0.84
CACNB1-203ENST00000394310 KRTAP9-3Q9BYQ3 159 aa9.83□□□□□ -0.84
CACNB1-203ENST00000394310 A6NN06 94 aa9.8□□□□□ -0.84
CACNB1-203ENST00000394310 LINC01554Q52M75 96 aa9.79□□□□□ -0.84
CACNB1-203ENST00000394310 PRO0628Q9UI54 55 aa9.79□□□□□ -0.84
CACNB1-203ENST00000394310 KRTAP12-1P59990 96 aa9.74□□□□□ -0.85
CACNB1-203ENST00000394310 K7ERS5 55 aa9.69□□□□□ -0.86
CACNB1-203ENST00000394310 KRTAP19-8Q3LI54 63 aa9.68□□□□□ -0.86
CACNB1-203ENST00000394310 KRTAP12-2P59991 146 aa9.68□□□□□ -0.86
CACNB1-203ENST00000394310 SPINT4Q6UDR6 99 aa9.64□□□□□ -0.87
CACNB1-203ENST00000394310 LCE2BO14633 110 aa9.55□□□□□ -0.88
CACNB1-203ENST00000394310 MT1BP07438 61 aa9.51□□□□□ -0.89
CACNB1-203ENST00000394310 PLAC4Q8WY50 150 aa9.51□□□□□ -0.89
CACNB1-203ENST00000394310 PMAIP1Q13794 54 aa9.49□□□□□ -0.89
CACNB1-203ENST00000394310 LCE2DQ5TA82 110 aaPredicted RBP9.46□□□□□ -0.9
CACNB1-203ENST00000394310 CAMK2N1Q7Z7J9 78 aa9.39□□□□□ -0.91
CACNB1-203ENST00000394310 USH2AO75445 5202 aa9.3□□□□□ -0.92
CACNB1-203ENST00000394310 ROMO1P60602 79 aa9.27□□□□□ -0.93
CACNB1-203ENST00000394310 KRTAP9-2Q9BYQ4 174 aa9.22□□□□□ -0.93
CACNB1-203ENST00000394310 C10orf95Q9H7T3 257 aa9.22□□□□□ -0.93
CACNB1-203ENST00000394310 MT1XP80297 61 aa9.18□□□□□ -0.94
CACNB1-203ENST00000394310 KRTAP10-5P60370 271 aa9.17□□□□□ -0.94
CACNB1-203ENST00000394310 PRO2289Q9P1D8 64 aa9.12□□□□□ -0.95
CACNB1-203ENST00000394310 KTN1-AS1Q86SY8 53 aa9.07□□□□□ -0.96
CACNB1-203ENST00000394310 FSIP2Q5CZC0 6907 aa9.03□□□□□ -0.96
CACNB1-203ENST00000394310 KRTAP19-6Q3LI70 58 aa9.03□□□□□ -0.96
CACNB1-203ENST00000394310 SSPOA2VEC9 5147 aa9.01□□□□□ -0.97
CACNB1-203ENST00000394310 KRTAP25-1Q3LHN0 102 aa9□□□□□ -0.97
CACNB1-203ENST00000394310 TNP1P09430 55 aa8.96□□□□□ -0.97
CACNB1-203ENST00000394310 CRCT1Q9UGL9 99 aa8.86□□□□□ -0.99
CACNB1-203ENST00000394310 PRAC1Q96KF2 57 aa8.83□□□□□ -1
CACNB1-203ENST00000394310 KRTAP23-1A1A580 65 aa8.78□□□□□ -1
CACNB1-203ENST00000394310 KRTAP10-7P60409 375 aaPredicted RBP8.77□□□□□ -1.01
CACNB1-203ENST00000394310 KRTAP10-12P60413 245 aa8.74□□□□□ -1.01
CACNB1-203ENST00000394310 PP632Q6XCG6 107 aa8.69□□□□□ -1.02
CACNB1-203ENST00000394310 FCGBPQ9Y6R7 5405 aaPredicted RBP8.67□□□□□ -1.02
CACNB1-203ENST00000394310 KRTAP9-6A0A140TA67 174 aa8.59□□□□□ -1.03
CACNB1-203ENST00000394310 LCE3AQ5TA76 89 aa8.56□□□□□ -1.04
CACNB1-203ENST00000394310 KRTAP8-1Q8IUC2 63 aa8.47□□□□□ -1.05
CACNB1-203ENST00000394310 KRTAP4-8A0A0G2JLE6 195 aa8.44□□□□□ -1.06
CACNB1-203ENST00000394310 KRTAP4-8Q9BYQ9 185 aa8.44□□□□□ -1.06
CACNB1-203ENST00000394310 KMT2DO14686 5537 aa8.39□□□□□ -1.07
CACNB1-203ENST00000394310 KRTAP12-3P60328 96 aa8.27□□□□□ -1.09
CACNB1-203ENST00000394310 MACF1Q9UPN3 7388 aaKnown RBP8.24□□□□□ -1.09
CACNB1-203ENST00000394310 KRTAP19-5Q3LI72 72 aa8.24□□□□□ -1.09
CACNB1-203ENST00000394310 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.2□□□□□ -1.1
CACNB1-203ENST00000394310 KRTAP19-7Q3SYF9 63 aa8.2□□□□□ -1.1
CACNB1-203ENST00000394310 KRTAP15-1Q3LI76 137 aa8.09□□□□□ -1.11
CACNB1-203ENST00000394310 MT1EP04732 61 aa8.05□□□□□ -1.12
CACNB1-203ENST00000394310 SYNE2Q8WXH0 6885 aaKnown RBP8.04□□□□□ -1.12
CACNB1-203ENST00000394310 KRTAP5-9P26371 169 aa7.99□□□□□ -1.13
CACNB1-203ENST00000394310 SPRR2FQ96RM1 72 aa7.99□□□□□ -1.13
CACNB1-203ENST00000394310 KRTAP6-3Q3LI67 103 aa7.95□□□□□ -1.14
CACNB1-203ENST00000394310 KRTAP19-4Q3LI73 84 aa7.92□□□□□ -1.14
CACNB1-203ENST00000394310 MT1LQ93083 61 aa7.87□□□□□ -1.15
CACNB1-203ENST00000394310 KRTAP9-7A8MTY7 169 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms