RNA–Protein interactions for RNA: ENST00000394086.7

RARA-203, Transcript of retinoic acid receptor alpha, humanhuman

TSL 2 BASIC

Gene RARA, Length 2,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-203ENST00000394086 RETNLBQ9BQ08 111 aa12.98□□□□□ -0.33
RARA-203ENST00000394086 HERC1Q15751 4861 aa12.97□□□□□ -0.33
RARA-203ENST00000394086 SPINK1P00995 79 aa12.9□□□□□ -0.34
RARA-203ENST00000394086 TYMSOSQ8TAI1 123 aa12.87□□□□□ -0.35
RARA-203ENST00000394086 RPS29P62273 56 aaKnown RBP12.85□□□□□ -0.35
RARA-203ENST00000394086 CSAG1Q6PB30 78 aa12.77□□□□□ -0.37
RARA-203ENST00000394086 H3BS24 57 aa12.74□□□□□ -0.37
RARA-203ENST00000394086 LINC00304Q8N9R0 145 aa12.71□□□□□ -0.37
RARA-203ENST00000394086 HMCN2Q8NDA2 5059 aa12.6□□□□□ -0.39
RARA-203ENST00000394086 C20orf166-AS1Q96NR2 134 aa12.55□□□□□ -0.4
RARA-203ENST00000394086 A8MUU9 505 aa12.54□□□□□ -0.4
RARA-203ENST00000394086 KRTAP25-1Q3LHN0 102 aa12.46□□□□□ -0.41
RARA-203ENST00000394086 H0YAA0 97 aa12.44□□□□□ -0.42
RARA-203ENST00000394086 A0A1B0GU33 70 aa12.42□□□□□ -0.42
RARA-203ENST00000394086 H1FX-AS1Q4G0G2 97 aa12.38□□□□□ -0.43
RARA-203ENST00000394086 LRP2P98164 4655 aa12.34□□□□□ -0.43
RARA-203ENST00000394086 ROMO1P60602 79 aa12.33□□□□□ -0.44
RARA-203ENST00000394086 KRTAP3-1Q9BYR8 98 aa12.33□□□□□ -0.44
RARA-203ENST00000394086 LPAP08519 4548 aa12.32□□□□□ -0.44
RARA-203ENST00000394086 K7ERS5 55 aa12.25□□□□□ -0.45
RARA-203ENST00000394086 C9orf92A6NGG3 77 aa12.25□□□□□ -0.45
RARA-203ENST00000394086 COX6B2Q6YFQ2 88 aa12.25□□□□□ -0.45
RARA-203ENST00000394086 UBR4Q5T4S7 5183 aa12.21□□□□□ -0.46
RARA-203ENST00000394086 TPRXLQ17RH7 258 aa12.2□□□□□ -0.46
RARA-203ENST00000394086 XP32Q5T750 250 aa11.95□□□□□ -0.5
RARA-203ENST00000394086 P0C880 135 aa11.94□□□□□ -0.5
RARA-203ENST00000394086 RNF213Q63HN8 5207 aa11.92□□□□□ -0.5
RARA-203ENST00000394086 RPL37P61927 97 aaKnown RBP11.92□□□□□ -0.5
RARA-203ENST00000394086 KRTAP10-6P60371 365 aaPredicted RBP11.86□□□□□ -0.51
RARA-203ENST00000394086 MUC17Q685J3 4493 aa11.85□□□□□ -0.51
RARA-203ENST00000394086 SEC61BP60468 96 aaKnown RBP11.83□□□□□ -0.52
RARA-203ENST00000394086 KRTAP3-3Q9BYR6 98 aa11.82□□□□□ -0.52
RARA-203ENST00000394086 MUC2Q02817 5179 aa11.78□□□□□ -0.52
RARA-203ENST00000394086 CRIPTQ9P021 101 aa11.76□□□□□ -0.53
RARA-203ENST00000394086 S4R3F8 94 aa11.76□□□□□ -0.53
RARA-203ENST00000394086 KRTAP3-2Q9BYR7 98 aa11.73□□□□□ -0.53
RARA-203ENST00000394086 KRTAP13-4Q3LI77 160 aa11.66□□□□□ -0.54
RARA-203ENST00000394086 KRTAP4-1Q9BYQ7 146 aa11.65□□□□□ -0.54
RARA-203ENST00000394086 SPINT4Q6UDR6 99 aa11.56□□□□□ -0.56
RARA-203ENST00000394086 A0A0D9SG42 100 aa11.55□□□□□ -0.56
RARA-203ENST00000394086 KRTAP15-1Q3LI76 137 aa11.55□□□□□ -0.56
RARA-203ENST00000394086 FAT4Q6V0I7 4981 aa11.41□□□□□ -0.58
RARA-203ENST00000394086 M0QZ58 72 aa11.41□□□□□ -0.58
RARA-203ENST00000394086 KRTAP12-2P59991 146 aa11.35□□□□□ -0.59
RARA-203ENST00000394086 C10orf95Q9H7T3 257 aa11.35□□□□□ -0.59
RARA-203ENST00000394086 NDUFAF8A1L188 74 aa11.35□□□□□ -0.59
RARA-203ENST00000394086 KRTAP12-1P59990 96 aa11.34□□□□□ -0.59
RARA-203ENST00000394086 KRTAP19-2Q3LHN2 52 aa11.28□□□□□ -0.6
RARA-203ENST00000394086 LCE2CQ5TA81 110 aa11.25□□□□□ -0.61
RARA-203ENST00000394086 LCE2AQ5TA79 106 aaPredicted RBP11.21□□□□□ -0.61
RARA-203ENST00000394086 MT1HP80294 61 aa11.08□□□□□ -0.64
RARA-203ENST00000394086 FLGP20930 4061 aaPredicted RBP10.97□□□□□ -0.65
RARA-203ENST00000394086 M0R2T5 61 aa10.97□□□□□ -0.65
RARA-203ENST00000394086 R4GN34 69 aa10.91□□□□□ -0.66
RARA-203ENST00000394086 LORP23490 312 aaPredicted RBP10.76□□□□□ -0.69
RARA-203ENST00000394086 PLAC4Q8WY50 150 aa10.65□□□□□ -0.71
RARA-203ENST00000394086 PP632Q6XCG6 107 aa10.64□□□□□ -0.71
RARA-203ENST00000394086 A0A0A0MQY5 61 aa10.59□□□□□ -0.71
RARA-203ENST00000394086 KRTAP9-2Q9BYQ4 174 aa10.57□□□□□ -0.72
RARA-203ENST00000394086 KRTAP9-8Q9BYQ0 159 aa10.55□□□□□ -0.72
RARA-203ENST00000394086 LUZP6Q538Z0 58 aa10.51□□□□□ -0.73
RARA-203ENST00000394086 LCE2DQ5TA82 110 aaPredicted RBP10.49□□□□□ -0.73
RARA-203ENST00000394086 MT2AP02795 61 aa10.45□□□□□ -0.74
RARA-203ENST00000394086 MT1FP04733 61 aa10.38□□□□□ -0.75
RARA-203ENST00000394086 KRTAP10-10P60014 251 aa10.36□□□□□ -0.75
RARA-203ENST00000394086 CAMK2N1Q7Z7J9 78 aa10.36□□□□□ -0.75
RARA-203ENST00000394086 KRTAP23-1A1A580 65 aa10.31□□□□□ -0.76
RARA-203ENST00000394086 FSIP2Q5CZC0 6907 aa10.21□□□□□ -0.77
RARA-203ENST00000394086 KRTAP9-3Q9BYQ3 159 aa10.2□□□□□ -0.78
RARA-203ENST00000394086 TNP1P09430 55 aa10.12□□□□□ -0.79
RARA-203ENST00000394086 LCE2BO14633 110 aa10.07□□□□□ -0.8
RARA-203ENST00000394086 CRCT1Q9UGL9 99 aa10.07□□□□□ -0.8
RARA-203ENST00000394086 KRTAP9-6A0A140TA67 174 aa10.06□□□□□ -0.8
RARA-203ENST00000394086 USH2AO75445 5202 aa10.02□□□□□ -0.81
RARA-203ENST00000394086 SPRR5A0A1B0GTR4 108 aa10.02□□□□□ -0.81
RARA-203ENST00000394086 KRTAP19-1Q8IUB9 90 aa9.87□□□□□ -0.83
RARA-203ENST00000394086 SSPOA2VEC9 5147 aa9.84□□□□□ -0.83
RARA-203ENST00000394086 SPRR2GQ9BYE4 73 aa9.8□□□□□ -0.84
RARA-203ENST00000394086 KRTAP19-8Q3LI54 63 aa9.66□□□□□ -0.86
RARA-203ENST00000394086 MT1BP07438 61 aa9.62□□□□□ -0.87
RARA-203ENST00000394086 KRTAP19-6Q3LI70 58 aa9.62□□□□□ -0.87
RARA-203ENST00000394086 FCGBPQ9Y6R7 5405 aaPredicted RBP9.57□□□□□ -0.88
RARA-203ENST00000394086 PRO2289Q9P1D8 64 aa9.49□□□□□ -0.89
RARA-203ENST00000394086 LCE3AQ5TA76 89 aa9.38□□□□□ -0.91
RARA-203ENST00000394086 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.34□□□□□ -0.91
RARA-203ENST00000394086 KRTAP8-1Q8IUC2 63 aa9.34□□□□□ -0.91
RARA-203ENST00000394086 INE1O15225 51 aa9.32□□□□□ -0.92
RARA-203ENST00000394086 KRTAP10-5P60370 271 aa9.31□□□□□ -0.92
RARA-203ENST00000394086 MACF1Q9UPN3 7388 aaKnown RBP9.25□□□□□ -0.93
RARA-203ENST00000394086 MT1XP80297 61 aa9.13□□□□□ -0.95
RARA-203ENST00000394086 KRTAP9-7A8MTY7 169 aa9.1□□□□□ -0.95
RARA-203ENST00000394086 SYNE2Q8WXH0 6885 aaKnown RBP9.1□□□□□ -0.95
RARA-203ENST00000394086 KRTAP12-3P60328 96 aa9□□□□□ -0.97
RARA-203ENST00000394086 KRTAP10-12P60413 245 aa9□□□□□ -0.97
RARA-203ENST00000394086 KRTAP6-3Q3LI67 103 aa8.86□□□□□ -0.99
RARA-203ENST00000394086 KRTAP10-7P60409 375 aaPredicted RBP8.75□□□□□ -1.01
RARA-203ENST00000394086 KMT2DO14686 5537 aa8.74□□□□□ -1.01
RARA-203ENST00000394086 KRTAP4-8A0A0G2JLE6 195 aa8.63□□□□□ -1.03
RARA-203ENST00000394086 KRTAP4-8Q9BYQ9 185 aa8.63□□□□□ -1.03
RARA-203ENST00000394086 KRTAP5-9P26371 169 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms