RNA–Protein interactions for RNA: ENST00000393693.6

SNCB-202, Transcript of synuclein beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCB, Length 1,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-202ENST00000393693 SPANXA2-OT1Q8N9U9 137 aa9.45□□□□□ -0.9
SNCB-202ENST00000393693 FAM236DA0A1B0GTK5 79 aa9.44□□□□□ -0.9
SNCB-202ENST00000393693 FAM236CP0DP71 79 aa9.44□□□□□ -0.9
SNCB-202ENST00000393693 SPINK7P58062 85 aa9.43□□□□□ -0.9
SNCB-202ENST00000393693 HRES1P13985 223 aa9.39□□□□□ -0.91
SNCB-202ENST00000393693 FCGBPQ9Y6R7 5405 aaPredicted RBP9.38□□□□□ -0.91
SNCB-202ENST00000393693 MT2AP02795 61 aa9.36□□□□□ -0.91
SNCB-202ENST00000393693 LCE2BO14633 110 aa9.31□□□□□ -0.92
SNCB-202ENST00000393693 MT1FP04733 61 aa9.3□□□□□ -0.92
SNCB-202ENST00000393693 KRTAP19-1Q8IUB9 90 aa9.3□□□□□ -0.92
SNCB-202ENST00000393693 C4orf26Q17RF5 130 aa9.26□□□□□ -0.93
SNCB-202ENST00000393693 KRTAP9-3Q9BYQ3 159 aa9.25□□□□□ -0.93
SNCB-202ENST00000393693 A8MUN3 132 aa9.24□□□□□ -0.93
SNCB-202ENST00000393693 ACYP2P14621 99 aa9.24□□□□□ -0.93
SNCB-202ENST00000393693 DMAC1Q96GE9 116 aa9.24□□□□□ -0.93
SNCB-202ENST00000393693 SERP1Q9Y6X1 66 aa9.24□□□□□ -0.93
SNCB-202ENST00000393693 KRTAP10-10P60014 251 aa9.21□□□□□ -0.94
SNCB-202ENST00000393693 MPLKIPQ8TAP9 179 aa9.2□□□□□ -0.94
SNCB-202ENST00000393693 RPS28P62857 69 aaKnown RBP9.18□□□□□ -0.94
SNCB-202ENST00000393693 RBM12B-AS1Q9P1G2 102 aa9.18□□□□□ -0.94
SNCB-202ENST00000393693 COA5Q86WW8 74 aa9.13□□□□□ -0.95
SNCB-202ENST00000393693 SYNE2Q8WXH0 6885 aaKnown RBP9.13□□□□□ -0.95
SNCB-202ENST00000393693 MACF1Q9UPN3 7388 aaKnown RBP9.11□□□□□ -0.95
SNCB-202ENST00000393693 CHKB-CPT1BH3BT56 60 aa9.1□□□□□ -0.95
SNCB-202ENST00000393693 KRTAP3-1Q9BYR8 98 aa9.08□□□□□ -0.96
SNCB-202ENST00000393693 H1FX-AS1Q4G0G2 97 aa9.02□□□□□ -0.97
SNCB-202ENST00000393693 KRTAP19-6Q3LI70 58 aa9□□□□□ -0.97
SNCB-202ENST00000393693 SPTSSBQ8NFR3 76 aa9□□□□□ -0.97
SNCB-202ENST00000393693 SMIM26A0A096LP01 95 aa8.99□□□□□ -0.97
SNCB-202ENST00000393693 S4R3F8 94 aa8.94□□□□□ -0.98
SNCB-202ENST00000393693 V9GYY9 64 aa8.87□□□□□ -0.99
SNCB-202ENST00000393693 LCA10Q71F78 164 aa8.85□□□□□ -0.99
SNCB-202ENST00000393693 Q1T7F1 81 aa8.8□□□□□ -1
SNCB-202ENST00000393693 KRTAP6-3Q3LI67 103 aa8.8□□□□□ -1
SNCB-202ENST00000393693 CSAG1Q6PB30 78 aa8.77□□□□□ -1.01
SNCB-202ENST00000393693 LINC01558Q9Y6Z2 57 aa8.77□□□□□ -1.01
SNCB-202ENST00000393693 KRTAP3-3Q9BYR6 98 aa8.76□□□□□ -1.01
SNCB-202ENST00000393693 SEC61GP60059 68 aa8.72□□□□□ -1.01
SNCB-202ENST00000393693 PRR15LQ9BU68 103 aa8.72□□□□□ -1.01
SNCB-202ENST00000393693 A0A1B0GU69 56 aa8.68□□□□□ -1.02
SNCB-202ENST00000393693 PSPHP1O15172 72 aa8.61□□□□□ -1.03
SNCB-202ENST00000393693 NEBP20929 6669 aa8.59□□□□□ -1.03
SNCB-202ENST00000393693 H0YAA0 97 aa8.56□□□□□ -1.04
SNCB-202ENST00000393693 Q5VV11 94 aa8.53□□□□□ -1.04
SNCB-202ENST00000393693 MUC12Q9UKN1 5478 aa8.52□□□□□ -1.05
SNCB-202ENST00000393693 ADM2Q7Z4H4 148 aa8.5□□□□□ -1.05
SNCB-202ENST00000393693 A6NN06 94 aa8.45□□□□□ -1.06
SNCB-202ENST00000393693 A0A1B0GU33 70 aa8.43□□□□□ -1.06
SNCB-202ENST00000393693 MT1BP07438 61 aa8.43□□□□□ -1.06
SNCB-202ENST00000393693 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
SNCB-202ENST00000393693 A6NED7 52 aa8.42□□□□□ -1.06
SNCB-202ENST00000393693 UQCR11O14957 56 aa8.42□□□□□ -1.06
SNCB-202ENST00000393693 P0C880 135 aa8.38□□□□□ -1.07
SNCB-202ENST00000393693 KRTAP20-1Q3LI63 56 aa8.35□□□□□ -1.07
SNCB-202ENST00000393693 KRTAP19-8Q3LI54 63 aa8.32□□□□□ -1.08
SNCB-202ENST00000393693 MIR22HGQ0VDD5 57 aa8.3□□□□□ -1.08
SNCB-202ENST00000393693 KRTAP10-5P60370 271 aa8.29□□□□□ -1.08
SNCB-202ENST00000393693 SPRR2GQ9BYE4 73 aa8.29□□□□□ -1.08
SNCB-202ENST00000393693 M0QZ58 72 aa8.28□□□□□ -1.08
SNCB-202ENST00000393693 SPATA8Q6RVD6 105 aa8.26□□□□□ -1.09
SNCB-202ENST00000393693 CRIPTQ9P021 101 aa8.26□□□□□ -1.09
SNCB-202ENST00000393693 CDC42SE1Q9NRR8 79 aa8.25□□□□□ -1.09
SNCB-202ENST00000393693 KRTAP5-9P26371 169 aa8.24□□□□□ -1.09
SNCB-202ENST00000393693 BRK1Q8WUW1 75 aa8.24□□□□□ -1.09
SNCB-202ENST00000393693 R4GN34 69 aa8.24□□□□□ -1.09
SNCB-202ENST00000393693 KMT2DO14686 5537 aa8.23□□□□□ -1.09
SNCB-202ENST00000393693 MDN1Q9NU22 5596 aa8.22□□□□□ -1.09
SNCB-202ENST00000393693 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
SNCB-202ENST00000393693 A0A0D9SG42 100 aa8.08□□□□□ -1.12
SNCB-202ENST00000393693 A8MU10 97 aa8.07□□□□□ -1.12
SNCB-202ENST00000393693 K7ERS5 55 aa8.04□□□□□ -1.12
SNCB-202ENST00000393693 LINC01554Q52M75 96 aa8.04□□□□□ -1.12
SNCB-202ENST00000393693 PRO0628Q9UI54 55 aa8.03□□□□□ -1.12
SNCB-202ENST00000393693 KRTAP2-3P0C7H8 128 aa8.02□□□□□ -1.13
SNCB-202ENST00000393693 KRTAP2-4Q9BYR9 128 aa8.02□□□□□ -1.13
SNCB-202ENST00000393693 SPINT4Q6UDR6 99 aa7.93□□□□□ -1.14
SNCB-202ENST00000393693 SPRR2FQ96RM1 72 aa7.93□□□□□ -1.14
SNCB-202ENST00000393693 SPRR2EP22531 72 aa7.91□□□□□ -1.14
SNCB-202ENST00000393693 SPRR2BP35325 72 aa7.91□□□□□ -1.14
SNCB-202ENST00000393693 SPRR2AP35326 72 aa7.91□□□□□ -1.14
SNCB-202ENST00000393693 KRTAP12-1P59990 96 aa7.9□□□□□ -1.14
SNCB-202ENST00000393693 KRTAP12-2P59991 146 aa7.85□□□□□ -1.15
SNCB-202ENST00000393693 PLAC4Q8WY50 150 aa7.82□□□□□ -1.16
SNCB-202ENST00000393693 PMAIP1Q13794 54 aa7.81□□□□□ -1.16
SNCB-202ENST00000393693 MT1XP80297 61 aa7.8□□□□□ -1.16
SNCB-202ENST00000393693 KRTAP8-1Q8IUC2 63 aa7.76□□□□□ -1.17
SNCB-202ENST00000393693 PRO2289Q9P1D8 64 aa7.76□□□□□ -1.17
SNCB-202ENST00000393693 LCE1AQ5T7P2 110 aa7.75□□□□□ -1.17
SNCB-202ENST00000393693 KRTAP2-2Q9BYT5 123 aa7.74□□□□□ -1.17
SNCB-202ENST00000393693 KRTAP2-1Q9BYU5 128 aa7.74□□□□□ -1.17
SNCB-202ENST00000393693 CAMK2N1Q7Z7J9 78 aa7.73□□□□□ -1.17
SNCB-202ENST00000393693 SPRR2DP22532 72 aa7.64□□□□□ -1.19
SNCB-202ENST00000393693 KRTAP4-8A0A0G2JLE6 195 aa7.63□□□□□ -1.19
SNCB-202ENST00000393693 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
SNCB-202ENST00000393693 ROMO1P60602 79 aa7.61□□□□□ -1.19
SNCB-202ENST00000393693 LCE3BQ5TA77 95 aa7.47□□□□□ -1.21
SNCB-202ENST00000393693 C10orf95Q9H7T3 257 aa7.47□□□□□ -1.21
SNCB-202ENST00000393693 KRTAP10-7P60409 375 aaPredicted RBP7.46□□□□□ -1.22
SNCB-202ENST00000393693 KTN1-AS1Q86SY8 53 aa7.45□□□□□ -1.22
SNCB-202ENST00000393693 KRTAP10-12P60413 245 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms