RNA–Protein interactions for RNA: ENST00000393438.6

RUFY1-202, Transcript of RUN and FYVE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUFY1, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUFY1-202ENST00000393438 TYMSOSQ8TAI1 123 aa7.44□□□□□ -1.22
RUFY1-202ENST00000393438 RPL37P61927 97 aaKnown RBP7.43□□□□□ -1.22
RUFY1-202ENST00000393438 SMR3BP02814 79 aaPredicted RBP7.42□□□□□ -1.22
RUFY1-202ENST00000393438 COX6B2Q6YFQ2 88 aa7.42□□□□□ -1.22
RUFY1-202ENST00000393438 PLAC4Q8WY50 150 aa7.41□□□□□ -1.22
RUFY1-202ENST00000393438 APOBP04114 4563 aaKnown RBP7.41□□□□□ -1.22
RUFY1-202ENST00000393438 SPINK6Q6UWN8 80 aa7.4□□□□□ -1.22
RUFY1-202ENST00000393438 R4GN34 69 aa7.37□□□□□ -1.23
RUFY1-202ENST00000393438 FAT1Q14517 4588 aa7.33□□□□□ -1.24
RUFY1-202ENST00000393438 KRTAP1-4P0C5Y4 121 aa7.31□□□□□ -1.24
RUFY1-202ENST00000393438 KRTAP10-4P60372 401 aaPredicted RBP7.28□□□□□ -1.24
RUFY1-202ENST00000393438 KRTAP13-2Q52LG2 175 aa7.28□□□□□ -1.24
RUFY1-202ENST00000393438 HSPG2P98160 4391 aa7.24□□□□□ -1.25
RUFY1-202ENST00000393438 RYR1P21817 5038 aa7.19□□□□□ -1.26
RUFY1-202ENST00000393438 Q5VSD8 79 aa7.19□□□□□ -1.26
RUFY1-202ENST00000393438 EPPK1P58107 5090 aaKnown RBP7.19□□□□□ -1.26
RUFY1-202ENST00000393438 XP32Q5T750 250 aa7.19□□□□□ -1.26
RUFY1-202ENST00000393438 PKHD1L1Q86WI1 4243 aa7.17□□□□□ -1.26
RUFY1-202ENST00000393438 KRTAP17-1Q9BYP8 105 aa7.15□□□□□ -1.26
RUFY1-202ENST00000393438 KIAA1109Q2LD37 5005 aa7.14□□□□□ -1.27
RUFY1-202ENST00000393438 KRTAP3-2Q9BYR7 98 aa7.12□□□□□ -1.27
RUFY1-202ENST00000393438 KRTAP10-8P60410 259 aa7.1□□□□□ -1.27
RUFY1-202ENST00000393438 INE1O15225 51 aa7.07□□□□□ -1.28
RUFY1-202ENST00000393438 LRP1Q07954 4544 aaKnown RBP7.06□□□□□ -1.28
RUFY1-202ENST00000393438 S4R3F8 94 aa7.05□□□□□ -1.28
RUFY1-202ENST00000393438 A0A0D9SG42 100 aa7.04□□□□□ -1.28
RUFY1-202ENST00000393438 RPS29P62273 56 aaKnown RBP7.03□□□□□ -1.28
RUFY1-202ENST00000393438 TNXBP22105 4242 aa7.02□□□□□ -1.29
RUFY1-202ENST00000393438 FAT3Q8TDW7 4589 aa7□□□□□ -1.29
RUFY1-202ENST00000393438 KRTAP4-5Q9BYR2 181 aa6.95□□□□□ -1.3
RUFY1-202ENST00000393438 DMBT1Q9UGM3 2413 aaPredicted RBP6.95□□□□□ -1.3
RUFY1-202ENST00000393438 KRTAP13-4Q3LI77 160 aa6.95□□□□□ -1.3
RUFY1-202ENST00000393438 MYCBP2O75592 4640 aa6.94□□□□□ -1.3
RUFY1-202ENST00000393438 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
RUFY1-202ENST00000393438 BIRC6Q9NR09 4857 aa6.88□□□□□ -1.31
RUFY1-202ENST00000393438 KRTAP12-2P59991 146 aa6.87□□□□□ -1.31
RUFY1-202ENST00000393438 C9orf92A6NGG3 77 aa6.85□□□□□ -1.31
RUFY1-202ENST00000393438 KRTAP10-6P60371 365 aaPredicted RBP6.85□□□□□ -1.31
RUFY1-202ENST00000393438 KRTAP3-1Q9BYR8 98 aa6.79□□□□□ -1.32
RUFY1-202ENST00000393438 HERC2O95714 4834 aa6.79□□□□□ -1.32
RUFY1-202ENST00000393438 ABCA13Q86UQ4 5058 aa6.79□□□□□ -1.32
RUFY1-202ENST00000393438 KRTAP12-1P59990 96 aa6.76□□□□□ -1.33
RUFY1-202ENST00000393438 SPRR5A0A1B0GTR4 108 aa6.65□□□□□ -1.35
RUFY1-202ENST00000393438 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
RUFY1-202ENST00000393438 LPAP08519 4548 aa6.58□□□□□ -1.36
RUFY1-202ENST00000393438 PCLOQ9Y6V0 5065 aa6.55□□□□□ -1.36
RUFY1-202ENST00000393438 LRP2P98164 4655 aa6.53□□□□□ -1.36
RUFY1-202ENST00000393438 KRTAP3-3Q9BYR6 98 aa6.51□□□□□ -1.37
RUFY1-202ENST00000393438 HERC1Q15751 4861 aa6.42□□□□□ -1.38
RUFY1-202ENST00000393438 M0QZ58 72 aa6.37□□□□□ -1.39
RUFY1-202ENST00000393438 HMCN2Q8NDA2 5059 aa6.31□□□□□ -1.4
RUFY1-202ENST00000393438 MUC17Q685J3 4493 aa6.28□□□□□ -1.4
RUFY1-202ENST00000393438 KRTAP4-1Q9BYQ7 146 aa6.27□□□□□ -1.4
RUFY1-202ENST00000393438 MUC2Q02817 5179 aa6.14□□□□□ -1.43
RUFY1-202ENST00000393438 KRTAP19-2Q3LHN2 52 aa6.08□□□□□ -1.44
RUFY1-202ENST00000393438 UBR4Q5T4S7 5183 aa6.03□□□□□ -1.44
RUFY1-202ENST00000393438 RNF213Q63HN8 5207 aa6□□□□□ -1.45
RUFY1-202ENST00000393438 LORP23490 312 aaPredicted RBP6□□□□□ -1.45
RUFY1-202ENST00000393438 FLGP20930 4061 aaPredicted RBP5.98□□□□□ -1.45
RUFY1-202ENST00000393438 LCE2CQ5TA81 110 aa5.93□□□□□ -1.46
RUFY1-202ENST00000393438 FAT4Q6V0I7 4981 aa5.88□□□□□ -1.47
RUFY1-202ENST00000393438 MT1HP80294 61 aa5.82□□□□□ -1.48
RUFY1-202ENST00000393438 LCE2AQ5TA79 106 aaPredicted RBP5.82□□□□□ -1.48
RUFY1-202ENST00000393438 M0R2T5 61 aa5.8□□□□□ -1.48
RUFY1-202ENST00000393438 LCE2DQ5TA82 110 aaPredicted RBP5.77□□□□□ -1.48
RUFY1-202ENST00000393438 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
RUFY1-202ENST00000393438 TNP1P09430 55 aa5.71□□□□□ -1.5
RUFY1-202ENST00000393438 KRTAP9-8Q9BYQ0 159 aa5.6□□□□□ -1.51
RUFY1-202ENST00000393438 MT2AP02795 61 aa5.59□□□□□ -1.51
RUFY1-202ENST00000393438 MT1FP04733 61 aa5.56□□□□□ -1.52
RUFY1-202ENST00000393438 KRTAP2-2Q9BYT5 123 aa5.5□□□□□ -1.53
RUFY1-202ENST00000393438 SPRR2GQ9BYE4 73 aa5.48□□□□□ -1.53
RUFY1-202ENST00000393438 KRTAP19-1Q8IUB9 90 aa5.48□□□□□ -1.53
RUFY1-202ENST00000393438 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.55
RUFY1-202ENST00000393438 KRTAP19-8Q3LI54 63 aa5.32□□□□□ -1.56
RUFY1-202ENST00000393438 MT1BP07438 61 aa5.27□□□□□ -1.57
RUFY1-202ENST00000393438 LCE2BO14633 110 aa5.26□□□□□ -1.57
RUFY1-202ENST00000393438 KRTAP10-12P60413 245 aa5.22□□□□□ -1.57
RUFY1-202ENST00000393438 LCE3AQ5TA76 89 aa5.16□□□□□ -1.58
RUFY1-202ENST00000393438 MT1XP80297 61 aa5.11□□□□□ -1.59
RUFY1-202ENST00000393438 USH2AO75445 5202 aa5.1□□□□□ -1.59
RUFY1-202ENST00000393438 KRTAP10-5P60370 271 aa5.1□□□□□ -1.59
RUFY1-202ENST00000393438 KRTAP8-1Q8IUC2 63 aa5.1□□□□□ -1.59
RUFY1-202ENST00000393438 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.59
RUFY1-202ENST00000393438 KRTAP6-3Q3LI67 103 aa5.07□□□□□ -1.6
RUFY1-202ENST00000393438 KRTAP2-3P0C7H8 128 aa5.02□□□□□ -1.61
RUFY1-202ENST00000393438 KRTAP2-4Q9BYR9 128 aa5.02□□□□□ -1.61
RUFY1-202ENST00000393438 KRTAP2-1Q9BYU5 128 aa5.02□□□□□ -1.61
RUFY1-202ENST00000393438 SSPOA2VEC9 5147 aa4.94□□□□□ -1.62
RUFY1-202ENST00000393438 FSIP2Q5CZC0 6907 aa4.93□□□□□ -1.62
RUFY1-202ENST00000393438 KRTAP10-7P60409 375 aaPredicted RBP4.92□□□□□ -1.62
RUFY1-202ENST00000393438 LCE1EQ5T753 118 aa4.9□□□□□ -1.62
RUFY1-202ENST00000393438 LCE5AQ5TCM9 118 aa4.9□□□□□ -1.62
RUFY1-202ENST00000393438 KRTAP19-6Q3LI70 58 aa4.89□□□□□ -1.63
RUFY1-202ENST00000393438 KRTAP9-6A0A140TA67 174 aa4.88□□□□□ -1.63
RUFY1-202ENST00000393438 KRTAP12-3P60328 96 aa4.87□□□□□ -1.63
RUFY1-202ENST00000393438 KRTAP12-4P60329 112 aa4.85□□□□□ -1.63
RUFY1-202ENST00000393438 LOC100996750A0A140TA64 210 aa4.84□□□□□ -1.63
RUFY1-202ENST00000393438 KRTAP4-6Q9BYQ5 205 aa4.84□□□□□ -1.63
RUFY1-202ENST00000393438 KRTAP9-2Q9BYQ4 174 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms