RNA–Protein interactions for RNA: ENST00000393119.6

MKS1-202, Transcript of Meckel syndrome, type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MKS1, Length 2,397 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-202ENST00000393119 C20orf166-AS1Q96NR2 134 aa8.05□□□□□ -1.12
MKS1-202ENST00000393119 SPATA8Q6RVD6 105 aa8.05□□□□□ -1.12
MKS1-202ENST00000393119 LRP2P98164 4655 aa8.05□□□□□ -1.12
MKS1-202ENST00000393119 PCLOQ9Y6V0 5065 aa8.03□□□□□ -1.12
MKS1-202ENST00000393119 ADM2Q7Z4H4 148 aa8.01□□□□□ -1.13
MKS1-202ENST00000393119 XP32Q5T750 250 aa7.98□□□□□ -1.13
MKS1-202ENST00000393119 A0A1B0GU69 56 aa7.97□□□□□ -1.13
MKS1-202ENST00000393119 LINC01554Q52M75 96 aa7.96□□□□□ -1.13
MKS1-202ENST00000393119 HERC1Q15751 4861 aa7.93□□□□□ -1.14
MKS1-202ENST00000393119 J3QL48 77 aa7.92□□□□□ -1.14
MKS1-202ENST00000393119 MIR22HGQ0VDD5 57 aa7.9□□□□□ -1.15
MKS1-202ENST00000393119 UQCR11O14957 56 aa7.89□□□□□ -1.15
MKS1-202ENST00000393119 RPL37P61927 97 aaKnown RBP7.88□□□□□ -1.15
MKS1-202ENST00000393119 KRTAP3-1Q9BYR8 98 aa7.81□□□□□ -1.16
MKS1-202ENST00000393119 TPRXLQ17RH7 258 aa7.79□□□□□ -1.16
MKS1-202ENST00000393119 CSAG1Q6PB30 78 aa7.78□□□□□ -1.16
MKS1-202ENST00000393119 H3BS24 57 aa7.75□□□□□ -1.17
MKS1-202ENST00000393119 MUC2Q02817 5179 aa7.74□□□□□ -1.17
MKS1-202ENST00000393119 HMCN2Q8NDA2 5059 aa7.71□□□□□ -1.18
MKS1-202ENST00000393119 COX6B2Q6YFQ2 88 aa7.64□□□□□ -1.19
MKS1-202ENST00000393119 MUC17Q685J3 4493 aa7.64□□□□□ -1.19
MKS1-202ENST00000393119 KRTAP4-1Q9BYQ7 146 aa7.63□□□□□ -1.19
MKS1-202ENST00000393119 H0YAA0 97 aa7.61□□□□□ -1.19
MKS1-202ENST00000393119 KRTAP25-1Q3LHN0 102 aa7.55□□□□□ -1.2
MKS1-202ENST00000393119 SEC61BP60468 96 aaKnown RBP7.5□□□□□ -1.21
MKS1-202ENST00000393119 KRTAP3-3Q9BYR6 98 aa7.5□□□□□ -1.21
MKS1-202ENST00000393119 UBR4Q5T4S7 5183 aa7.5□□□□□ -1.21
MKS1-202ENST00000393119 ROMO1P60602 79 aa7.47□□□□□ -1.21
MKS1-202ENST00000393119 RNF213Q63HN8 5207 aa7.46□□□□□ -1.21
MKS1-202ENST00000393119 A0A1B0GU33 70 aa7.45□□□□□ -1.22
MKS1-202ENST00000393119 H1FX-AS1Q4G0G2 97 aa7.45□□□□□ -1.22
MKS1-202ENST00000393119 S4R3F8 94 aa7.41□□□□□ -1.22
MKS1-202ENST00000393119 FAT4Q6V0I7 4981 aa7.38□□□□□ -1.23
MKS1-202ENST00000393119 KRTAP19-2Q3LHN2 52 aa7.35□□□□□ -1.23
MKS1-202ENST00000393119 K7ERS5 55 aa7.31□□□□□ -1.24
MKS1-202ENST00000393119 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
MKS1-202ENST00000393119 P0C880 135 aa7.27□□□□□ -1.25
MKS1-202ENST00000393119 KRTAP3-2Q9BYR7 98 aa7.25□□□□□ -1.25
MKS1-202ENST00000393119 KRTAP10-6P60371 365 aaPredicted RBP7.24□□□□□ -1.25
MKS1-202ENST00000393119 FLGP20930 4061 aaPredicted RBP7.22□□□□□ -1.25
MKS1-202ENST00000393119 KRTAP13-4Q3LI77 160 aa7.15□□□□□ -1.26
MKS1-202ENST00000393119 LCE2CQ5TA81 110 aa7.14□□□□□ -1.27
MKS1-202ENST00000393119 SPINT4Q6UDR6 99 aa7.08□□□□□ -1.28
MKS1-202ENST00000393119 LORP23490 312 aaPredicted RBP7.07□□□□□ -1.28
MKS1-202ENST00000393119 A0A0D9SG42 100 aa7.04□□□□□ -1.28
MKS1-202ENST00000393119 KRTAP15-1Q3LI76 137 aa7.02□□□□□ -1.29
MKS1-202ENST00000393119 C10orf95Q9H7T3 257 aa6.97□□□□□ -1.29
MKS1-202ENST00000393119 MT1HP80294 61 aa6.96□□□□□ -1.29
MKS1-202ENST00000393119 NDUFAF8A1L188 74 aa6.93□□□□□ -1.3
MKS1-202ENST00000393119 M0R2T5 61 aa6.91□□□□□ -1.3
MKS1-202ENST00000393119 KRTAP12-2P59991 146 aa6.91□□□□□ -1.3
MKS1-202ENST00000393119 M0QZ58 72 aa6.89□□□□□ -1.31
MKS1-202ENST00000393119 KRTAP12-1P59990 96 aa6.86□□□□□ -1.31
MKS1-202ENST00000393119 R4GN34 69 aa6.86□□□□□ -1.31
MKS1-202ENST00000393119 KRTAP9-8Q9BYQ0 159 aa6.73□□□□□ -1.33
MKS1-202ENST00000393119 MT1FP04733 61 aa6.73□□□□□ -1.33
MKS1-202ENST00000393119 MT2AP02795 61 aa6.72□□□□□ -1.33
MKS1-202ENST00000393119 KRTAP10-10P60014 251 aa6.67□□□□□ -1.34
MKS1-202ENST00000393119 KRTAP19-1Q8IUB9 90 aa6.62□□□□□ -1.35
MKS1-202ENST00000393119 LCE2AQ5TA79 106 aaPredicted RBP6.55□□□□□ -1.36
MKS1-202ENST00000393119 SPRR2GQ9BYE4 73 aa6.54□□□□□ -1.36
MKS1-202ENST00000393119 PLAC4Q8WY50 150 aa6.47□□□□□ -1.37
MKS1-202ENST00000393119 USH2AO75445 5202 aa6.46□□□□□ -1.37
MKS1-202ENST00000393119 KRTAP9-3Q9BYQ3 159 aa6.46□□□□□ -1.38
MKS1-202ENST00000393119 CAMK2N1Q7Z7J9 78 aa6.44□□□□□ -1.38
MKS1-202ENST00000393119 A0A0A0MQY5 61 aa6.43□□□□□ -1.38
MKS1-202ENST00000393119 LUZP6Q538Z0 58 aa6.38□□□□□ -1.39
MKS1-202ENST00000393119 MT1BP07438 61 aa6.36□□□□□ -1.39
MKS1-202ENST00000393119 LCE2BO14633 110 aa6.34□□□□□ -1.39
MKS1-202ENST00000393119 KRTAP19-8Q3LI54 63 aa6.33□□□□□ -1.4
MKS1-202ENST00000393119 PP632Q6XCG6 107 aa6.29□□□□□ -1.4
MKS1-202ENST00000393119 FSIP2Q5CZC0 6907 aa6.26□□□□□ -1.41
MKS1-202ENST00000393119 KRTAP10-5P60370 271 aa6.18□□□□□ -1.42
MKS1-202ENST00000393119 MT1XP80297 61 aa6.18□□□□□ -1.42
MKS1-202ENST00000393119 SPRR5A0A1B0GTR4 108 aa6.13□□□□□ -1.43
MKS1-202ENST00000393119 SSPOA2VEC9 5147 aa6.1□□□□□ -1.43
MKS1-202ENST00000393119 TNP1P09430 55 aa6.08□□□□□ -1.44
MKS1-202ENST00000393119 KRTAP23-1A1A580 65 aa6.08□□□□□ -1.44
MKS1-202ENST00000393119 KMT2DO14686 5537 aa6.06□□□□□ -1.44
MKS1-202ENST00000393119 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
MKS1-202ENST00000393119 LCE3AQ5TA76 89 aa5.96□□□□□ -1.46
MKS1-202ENST00000393119 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
MKS1-202ENST00000393119 KRTAP10-12P60413 245 aa5.85□□□□□ -1.47
MKS1-202ENST00000393119 KRTAP4-8A0A0G2JLE6 195 aa5.84□□□□□ -1.48
MKS1-202ENST00000393119 KRTAP4-8Q9BYQ9 185 aa5.84□□□□□ -1.48
MKS1-202ENST00000393119 LCE2DQ5TA82 110 aaPredicted RBP5.78□□□□□ -1.48
MKS1-202ENST00000393119 FCGBPQ9Y6R7 5405 aaPredicted RBP5.77□□□□□ -1.49
MKS1-202ENST00000393119 KRTAP19-6Q3LI70 58 aa5.75□□□□□ -1.49
MKS1-202ENST00000393119 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
MKS1-202ENST00000393119 KRTAP19-5Q3LI72 72 aa5.65□□□□□ -1.51
MKS1-202ENST00000393119 KRTAP9-2Q9BYQ4 174 aa5.65□□□□□ -1.51
MKS1-202ENST00000393119 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
MKS1-202ENST00000393119 INE1O15225 51 aa5.58□□□□□ -1.52
MKS1-202ENST00000393119 MACF1Q9UPN3 7388 aaKnown RBP5.57□□□□□ -1.52
MKS1-202ENST00000393119 KRTAP19-7Q3SYF9 63 aa5.52□□□□□ -1.53
MKS1-202ENST00000393119 SYNE2Q8WXH0 6885 aaKnown RBP5.5□□□□□ -1.53
MKS1-202ENST00000393119 MUC12Q9UKN1 5478 aa5.49□□□□□ -1.53
MKS1-202ENST00000393119 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
MKS1-202ENST00000393119 MT1EP04732 61 aa5.38□□□□□ -1.55
MKS1-202ENST00000393119 KRTAP4-7Q9BYR0 210 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms