RNA–Protein interactions for RNA: ENST00000392842.5

RFX4-203, Transcript of regulatory factor X4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX4, Length 3,955 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-203ENST00000392842 FAT2Q9NYQ8 4349 aa3.45□□□□□ -1.86
RFX4-203ENST00000392842 CAMK2N1Q7Z7J9 78 aa3.45□□□□□ -1.86
RFX4-203ENST00000392842 LRP1Q07954 4544 aaKnown RBP3.45□□□□□ -1.86
RFX4-203ENST00000392842 HERC2O95714 4834 aa3.44□□□□□ -1.86
RFX4-203ENST00000392842 HECTD4Q9Y4D8 3996 aa3.44□□□□□ -1.86
RFX4-203ENST00000392842 A8MUU9 505 aa3.43□□□□□ -1.86
RFX4-203ENST00000392842 FAT3Q8TDW7 4589 aa3.43□□□□□ -1.86
RFX4-203ENST00000392842 KRTAP16-1A8MUX0 517 aa3.43□□□□□ -1.86
RFX4-203ENST00000392842 ROMO1P60602 79 aa3.42□□□□□ -1.86
RFX4-203ENST00000392842 C20orf166-AS1Q96NR2 134 aa3.42□□□□□ -1.86
RFX4-203ENST00000392842 M0QZ58 72 aa3.42□□□□□ -1.86
RFX4-203ENST00000392842 BIRC6Q9NR09 4857 aa3.42□□□□□ -1.86
RFX4-203ENST00000392842 SEC61BP60468 96 aaKnown RBP3.41□□□□□ -1.86
RFX4-203ENST00000392842 KRTAP10-4P60372 401 aaPredicted RBP3.4□□□□□ -1.87
RFX4-203ENST00000392842 PKD1P98161 4303 aa3.39□□□□□ -1.87
RFX4-203ENST00000392842 M0R2T5 61 aa3.39□□□□□ -1.87
RFX4-203ENST00000392842 KRTAP13-3Q3SY46 172 aa3.39□□□□□ -1.87
RFX4-203ENST00000392842 HSPG2P98160 4391 aa3.39□□□□□ -1.87
RFX4-203ENST00000392842 KRTAP10-8P60410 259 aa3.38□□□□□ -1.87
RFX4-203ENST00000392842 ABCA13Q86UQ4 5058 aa3.37□□□□□ -1.87
RFX4-203ENST00000392842 H3BS24 57 aa3.36□□□□□ -1.87
RFX4-203ENST00000392842 MT1HL1P0DM35 61 aa3.36□□□□□ -1.87
RFX4-203ENST00000392842 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
RFX4-203ENST00000392842 H0YAA0 97 aa3.35□□□□□ -1.87
RFX4-203ENST00000392842 XP32Q5T750 250 aa3.34□□□□□ -1.87
RFX4-203ENST00000392842 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
RFX4-203ENST00000392842 HERC1Q15751 4861 aa3.31□□□□□ -1.88
RFX4-203ENST00000392842 PCLOQ9Y6V0 5065 aa3.3□□□□□ -1.88
RFX4-203ENST00000392842 LRP2P98164 4655 aa3.28□□□□□ -1.88
RFX4-203ENST00000392842 P0C880 135 aa3.27□□□□□ -1.89
RFX4-203ENST00000392842 C10orf95Q9H7T3 257 aa3.27□□□□□ -1.89
RFX4-203ENST00000392842 KRTAP3-1Q9BYR8 98 aa3.24□□□□□ -1.89
RFX4-203ENST00000392842 TPRXLQ17RH7 258 aa3.21□□□□□ -1.89
RFX4-203ENST00000392842 RNF213Q63HN8 5207 aa3.21□□□□□ -1.9
RFX4-203ENST00000392842 NDUFAF8A1L188 74 aa3.21□□□□□ -1.9
RFX4-203ENST00000392842 LPAP08519 4548 aa3.2□□□□□ -1.9
RFX4-203ENST00000392842 UBR4Q5T4S7 5183 aa3.19□□□□□ -1.9
RFX4-203ENST00000392842 PLAC4Q8WY50 150 aa3.19□□□□□ -1.9
RFX4-203ENST00000392842 A0A0A0MQY5 61 aa3.18□□□□□ -1.9
RFX4-203ENST00000392842 MUC2Q02817 5179 aa3.16□□□□□ -1.9
RFX4-203ENST00000392842 PKHD1L1Q86WI1 4243 aa3.14□□□□□ -1.91
RFX4-203ENST00000392842 KRTAP12-2P59991 146 aa3.13□□□□□ -1.91
RFX4-203ENST00000392842 KRTAP13-4Q3LI77 160 aa3.12□□□□□ -1.91
RFX4-203ENST00000392842 TNP1P09430 55 aa3.11□□□□□ -1.91
RFX4-203ENST00000392842 KRTAP10-6P60371 365 aaPredicted RBP3.11□□□□□ -1.91
RFX4-203ENST00000392842 TNXBP22105 4242 aa3.09□□□□□ -1.91
RFX4-203ENST00000392842 KRTAP3-3Q9BYR6 98 aa3.09□□□□□ -1.91
RFX4-203ENST00000392842 KRTAP3-2Q9BYR7 98 aa3.09□□□□□ -1.91
RFX4-203ENST00000392842 KRTAP12-1P59990 96 aa3.08□□□□□ -1.92
RFX4-203ENST00000392842 LCE2DQ5TA82 110 aaPredicted RBP3.08□□□□□ -1.92
RFX4-203ENST00000392842 KRTAP4-1Q9BYQ7 146 aa3.07□□□□□ -1.92
RFX4-203ENST00000392842 FSIP2Q5CZC0 6907 aa3.04□□□□□ -1.92
RFX4-203ENST00000392842 HMCN2Q8NDA2 5059 aa3.04□□□□□ -1.92
RFX4-203ENST00000392842 KRTAP10-10P60014 251 aa3.03□□□□□ -1.92
RFX4-203ENST00000392842 FAT4Q6V0I7 4981 aa3.03□□□□□ -1.92
RFX4-203ENST00000392842 PP632Q6XCG6 107 aa3.02□□□□□ -1.93
RFX4-203ENST00000392842 LORP23490 312 aaPredicted RBP2.89□□□□□ -1.95
RFX4-203ENST00000392842 MT1HP80294 61 aa2.87□□□□□ -1.95
RFX4-203ENST00000392842 LCE2AQ5TA79 106 aaPredicted RBP2.86□□□□□ -1.95
RFX4-203ENST00000392842 PRO2289Q9P1D8 64 aa2.84□□□□□ -1.96
RFX4-203ENST00000392842 KRTAP15-1Q3LI76 137 aa2.82□□□□□ -1.96
RFX4-203ENST00000392842 LCE2CQ5TA81 110 aa2.79□□□□□ -1.96
RFX4-203ENST00000392842 MUC17Q685J3 4493 aa2.77□□□□□ -1.97
RFX4-203ENST00000392842 KRTAP19-2Q3LHN2 52 aa2.76□□□□□ -1.97
RFX4-203ENST00000392842 KRTAP23-1A1A580 65 aa2.75□□□□□ -1.97
RFX4-203ENST00000392842 MT2AP02795 61 aa2.75□□□□□ -1.97
RFX4-203ENST00000392842 MT1FP04733 61 aa2.75□□□□□ -1.97
RFX4-203ENST00000392842 USH2AO75445 5202 aa2.74□□□□□ -1.97
RFX4-203ENST00000392842 FLGP20930 4061 aaPredicted RBP2.72□□□□□ -1.97
RFX4-203ENST00000392842 LCE2BO14633 110 aa2.71□□□□□ -1.98
RFX4-203ENST00000392842 KRTAP9-8Q9BYQ0 159 aa2.68□□□□□ -1.98
RFX4-203ENST00000392842 KRTAP10-12P60413 245 aa2.67□□□□□ -1.98
RFX4-203ENST00000392842 LCE3AQ5TA76 89 aa2.67□□□□□ -1.98
RFX4-203ENST00000392842 KRTAP12-3P60328 96 aa2.63□□□□□ -1.99
RFX4-203ENST00000392842 KRTAP9-2Q9BYQ4 174 aa2.63□□□□□ -1.99
RFX4-203ENST00000392842 KRTAP19-1Q8IUB9 90 aa2.59□□□□□ -2
RFX4-203ENST00000392842 SPRR2GQ9BYE4 73 aa2.58□□□□□ -2
RFX4-203ENST00000392842 KRTAP9-3Q9BYQ3 159 aa2.58□□□□□ -2
RFX4-203ENST00000392842 CRCT1Q9UGL9 99 aa2.53□□□□□ -2
RFX4-203ENST00000392842 MT1BP07438 61 aa2.5□□□□□ -2.01
RFX4-203ENST00000392842 SSPOA2VEC9 5147 aa2.49□□□□□ -2.01
RFX4-203ENST00000392842 SYNE2Q8WXH0 6885 aaKnown RBP2.49□□□□□ -2.01
RFX4-203ENST00000392842 KMT2DO14686 5537 aa2.49□□□□□ -2.01
RFX4-203ENST00000392842 INE1O15225 51 aa2.47□□□□□ -2.01
RFX4-203ENST00000392842 KRTAP9-6A0A140TA67 174 aa2.46□□□□□ -2.02
RFX4-203ENST00000392842 FCGBPQ9Y6R7 5405 aaPredicted RBP2.45□□□□□ -2.02
RFX4-203ENST00000392842 KRTAP8-1Q8IUC2 63 aa2.44□□□□□ -2.02
RFX4-203ENST00000392842 MACF1Q9UPN3 7388 aaKnown RBP2.44□□□□□ -2.02
RFX4-203ENST00000392842 KRTAP19-8Q3LI54 63 aa2.44□□□□□ -2.02
RFX4-203ENST00000392842 KRTAP4-8A0A0G2JLE6 195 aa2.43□□□□□ -2.02
RFX4-203ENST00000392842 KRTAP4-8Q9BYQ9 185 aa2.43□□□□□ -2.02
RFX4-203ENST00000392842 KRTAP10-7P60409 375 aaPredicted RBP2.42□□□□□ -2.02
RFX4-203ENST00000392842 MT1XP80297 61 aa2.42□□□□□ -2.02
RFX4-203ENST00000392842 KRTAP19-5Q3LI72 72 aa2.41□□□□□ -2.02
RFX4-203ENST00000392842 SPRR2FQ96RM1 72 aa2.41□□□□□ -2.02
RFX4-203ENST00000392842 DSTQ03001 7570 aaKnown RBP2.4□□□□□ -2.03
RFX4-203ENST00000392842 KRTAP10-5P60370 271 aa2.4□□□□□ -2.03
RFX4-203ENST00000392842 LOC100996750A0A140TA64 210 aa2.37□□□□□ -2.03
RFX4-203ENST00000392842 KRTAP4-6Q9BYQ5 205 aa2.37□□□□□ -2.03
RFX4-203ENST00000392842 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms