RNA–Protein interactions for RNA: ENST00000392590.3

CDCA4-202, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-202ENST00000392590 FAM236AA0A1B0GUQ0 79 aa9.62□□□□□ -0.87
CDCA4-202ENST00000392590 FAM236BA0A1B0GV22 79 aa9.62□□□□□ -0.87
CDCA4-202ENST00000392590 SMIM20Q8N5G0 67 aa9.59□□□□□ -0.87
CDCA4-202ENST00000392590 TRAV7A0A075B6U4 112 aa9.56□□□□□ -0.88
CDCA4-202ENST00000392590 NDUFC1O43677 76 aa9.55□□□□□ -0.88
CDCA4-202ENST00000392590 SSPOA2VEC9 5147 aa9.47□□□□□ -0.89
CDCA4-202ENST00000392590 DMAC1Q96GE9 116 aa9.44□□□□□ -0.9
CDCA4-202ENST00000392590 KRTAP19-1Q8IUB9 90 aa9.42□□□□□ -0.9
CDCA4-202ENST00000392590 H0YAA0 97 aa9.36□□□□□ -0.91
CDCA4-202ENST00000392590 SERP2Q8N6R1 65 aa9.34□□□□□ -0.91
CDCA4-202ENST00000392590 SPRR2GQ9BYE4 73 aa9.34□□□□□ -0.91
CDCA4-202ENST00000392590 SNURFQ9Y675 71 aa9.34□□□□□ -0.91
CDCA4-202ENST00000392590 KRTAP3-2Q9BYR7 98 aa9.33□□□□□ -0.92
CDCA4-202ENST00000392590 KRTAP19-6Q3LI70 58 aa9.31□□□□□ -0.92
CDCA4-202ENST00000392590 CRIPTQ9P021 101 aa9.31□□□□□ -0.92
CDCA4-202ENST00000392590 ACYP2P14621 99 aa9.29□□□□□ -0.92
CDCA4-202ENST00000392590 ADM2Q7Z4H4 148 aa9.29□□□□□ -0.92
CDCA4-202ENST00000392590 C20orf197Q8N268 126 aa9.28□□□□□ -0.92
CDCA4-202ENST00000392590 FCGBPQ9Y6R7 5405 aaPredicted RBP9.25□□□□□ -0.93
CDCA4-202ENST00000392590 KRTAP19-8Q3LI54 63 aa9.24□□□□□ -0.93
CDCA4-202ENST00000392590 Q5VV11 94 aa9.23□□□□□ -0.93
CDCA4-202ENST00000392590 MT1BP07438 61 aa9.2□□□□□ -0.94
CDCA4-202ENST00000392590 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.17□□□□□ -0.94
CDCA4-202ENST00000392590 SPANXA2-OT1Q8N9U9 137 aa9.17□□□□□ -0.94
CDCA4-202ENST00000392590 SPTSSBQ8NFR3 76 aa9.14□□□□□ -0.95
CDCA4-202ENST00000392590 CHKB-CPT1BH3BT56 60 aa9.13□□□□□ -0.95
CDCA4-202ENST00000392590 COX7CP15954 63 aa9.12□□□□□ -0.95
CDCA4-202ENST00000392590 LOC100996750A0A140TA64 210 aa9.1□□□□□ -0.95
CDCA4-202ENST00000392590 P0C880 135 aa9.1□□□□□ -0.95
CDCA4-202ENST00000392590 KRTAP4-6Q9BYQ5 205 aa9.1□□□□□ -0.95
CDCA4-202ENST00000392590 R4GN34 69 aa9.04□□□□□ -0.96
CDCA4-202ENST00000392590 A6NN06 94 aa9.02□□□□□ -0.97
CDCA4-202ENST00000392590 M0QZ58 72 aa8.98□□□□□ -0.97
CDCA4-202ENST00000392590 KRTAP9-7A8MTY7 169 aa8.97□□□□□ -0.97
CDCA4-202ENST00000392590 SVIPQ8NHG7 77 aa8.96□□□□□ -0.97
CDCA4-202ENST00000392590 ANAPC13Q9BS18 74 aa8.95□□□□□ -0.98
CDCA4-202ENST00000392590 KRTAP10-5P60370 271 aa8.93□□□□□ -0.98
CDCA4-202ENST00000392590 H7BZZ5 65 aa8.91□□□□□ -0.98
CDCA4-202ENST00000392590 CYSTM1Q9H1C7 97 aa8.91□□□□□ -0.98
CDCA4-202ENST00000392590 COA5Q86WW8 74 aa8.9□□□□□ -0.98
CDCA4-202ENST00000392590 MACF1Q9UPN3 7388 aaKnown RBP8.88□□□□□ -0.99
CDCA4-202ENST00000392590 PLAC4Q8WY50 150 aa8.86□□□□□ -0.99
CDCA4-202ENST00000392590 LINC01554Q52M75 96 aa8.85□□□□□ -0.99
CDCA4-202ENST00000392590 PCP4P48539 62 aa8.79□□□□□ -1
CDCA4-202ENST00000392590 SYNE2Q8WXH0 6885 aaKnown RBP8.79□□□□□ -1
CDCA4-202ENST00000392590 CCDC179H3BU77 68 aa8.75□□□□□ -1.01
CDCA4-202ENST00000392590 PRO2289Q9P1D8 64 aa8.75□□□□□ -1.01
CDCA4-202ENST00000392590 MT1XP80297 61 aa8.7□□□□□ -1.02
CDCA4-202ENST00000392590 SEC61GP60059 68 aa8.68□□□□□ -1.02
CDCA4-202ENST00000392590 KRTAP6-3Q3LI67 103 aa8.68□□□□□ -1.02
CDCA4-202ENST00000392590 SERP1Q9Y6X1 66 aa8.65□□□□□ -1.02
CDCA4-202ENST00000392590 KRTAP13-4Q3LI77 160 aa8.6□□□□□ -1.03
CDCA4-202ENST00000392590 ATP5EP56381 51 aaPredicted RBP8.56□□□□□ -1.04
CDCA4-202ENST00000392590 A0A1B0GU33 70 aa8.49□□□□□ -1.05
CDCA4-202ENST00000392590 A0A1B0GU69 56 aa8.46□□□□□ -1.05
CDCA4-202ENST00000392590 TMEM258P61165 79 aa8.44□□□□□ -1.06
CDCA4-202ENST00000392590 SPATA8Q6RVD6 105 aa8.44□□□□□ -1.06
CDCA4-202ENST00000392590 KRTAP12-2P59991 146 aa8.43□□□□□ -1.06
CDCA4-202ENST00000392590 A0A0D9SG42 100 aa8.4□□□□□ -1.06
CDCA4-202ENST00000392590 KRTAP5-9P26371 169 aa8.38□□□□□ -1.07
CDCA4-202ENST00000392590 CAMK2N1Q7Z7J9 78 aa8.37□□□□□ -1.07
CDCA4-202ENST00000392590 KRTAP10-7P60409 375 aaPredicted RBP8.31□□□□□ -1.08
CDCA4-202ENST00000392590 KMT2DO14686 5537 aa8.29□□□□□ -1.08
CDCA4-202ENST00000392590 PRR15LQ9BU68 103 aa8.29□□□□□ -1.08
CDCA4-202ENST00000392590 KRTAP8-1Q8IUC2 63 aa8.29□□□□□ -1.08
CDCA4-202ENST00000392590 SPINT4Q6UDR6 99 aa8.28□□□□□ -1.08
CDCA4-202ENST00000392590 KRTAP10-12P60413 245 aa8.26□□□□□ -1.09
CDCA4-202ENST00000392590 LINC01558Q9Y6Z2 57 aa8.26□□□□□ -1.09
CDCA4-202ENST00000392590 SMIM26A0A096LP01 95 aa8.25□□□□□ -1.09
CDCA4-202ENST00000392590 KRTAP4-8A0A0G2JLE6 195 aa8.24□□□□□ -1.09
CDCA4-202ENST00000392590 KRTAP4-8Q9BYQ9 185 aa8.24□□□□□ -1.09
CDCA4-202ENST00000392590 MUC12Q9UKN1 5478 aa8.23□□□□□ -1.09
CDCA4-202ENST00000392590 KRTAP12-1P59990 96 aa8.22□□□□□ -1.09
CDCA4-202ENST00000392590 SPRR2FQ96RM1 72 aa8.22□□□□□ -1.09
CDCA4-202ENST00000392590 NEBP20929 6669 aa8.21□□□□□ -1.1
CDCA4-202ENST00000392590 A8MU10 97 aa8.17□□□□□ -1.1
CDCA4-202ENST00000392590 MDN1Q9NU22 5596 aa8.08□□□□□ -1.12
CDCA4-202ENST00000392590 SPRR2EP22531 72 aa8.03□□□□□ -1.12
CDCA4-202ENST00000392590 SPRR2BP35325 72 aa8.03□□□□□ -1.12
CDCA4-202ENST00000392590 SPRR2AP35326 72 aa8.03□□□□□ -1.12
CDCA4-202ENST00000392590 UQCR11O14957 56 aa8.02□□□□□ -1.13
CDCA4-202ENST00000392590 LCE1AQ5T7P2 110 aa7.96□□□□□ -1.14
CDCA4-202ENST00000392590 V9GYY9 64 aa7.95□□□□□ -1.14
CDCA4-202ENST00000392590 KRTAP20-1Q3LI63 56 aa7.9□□□□□ -1.14
CDCA4-202ENST00000392590 Q1T7F1 81 aa7.89□□□□□ -1.15
CDCA4-202ENST00000392590 PSPHP1O15172 72 aa7.87□□□□□ -1.15
CDCA4-202ENST00000392590 MIR22HGQ0VDD5 57 aa7.87□□□□□ -1.15
CDCA4-202ENST00000392590 C10orf95Q9H7T3 257 aa7.84□□□□□ -1.15
CDCA4-202ENST00000392590 KRTAP2-3P0C7H8 128 aa7.78□□□□□ -1.16
CDCA4-202ENST00000392590 KRTAP2-4Q9BYR9 128 aa7.78□□□□□ -1.16
CDCA4-202ENST00000392590 TNP1P09430 55 aa7.78□□□□□ -1.16
CDCA4-202ENST00000392590 KRTAP19-7Q3SYF9 63 aa7.77□□□□□ -1.17
CDCA4-202ENST00000392590 SPRR2DP22532 72 aa7.76□□□□□ -1.17
CDCA4-202ENST00000392590 RPS28P62857 69 aaKnown RBP7.74□□□□□ -1.17
CDCA4-202ENST00000392590 MT1EP04732 61 aa7.69□□□□□ -1.18
CDCA4-202ENST00000392590 K7ERS5 55 aa7.68□□□□□ -1.18
CDCA4-202ENST00000392590 KRTAP19-5Q3LI72 72 aa7.66□□□□□ -1.18
CDCA4-202ENST00000392590 A6NED7 52 aa7.62□□□□□ -1.19
CDCA4-202ENST00000392590 LCE3AQ5TA76 89 aa7.62□□□□□ -1.19
CDCA4-202ENST00000392590 KRTAP19-3Q7Z4W3 81 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms