RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 UQCR11O14957 56 aa10.86□□□□□ -0.67
CSNK1D-203ENST00000392334 J3QL48 77 aa10.84□□□□□ -0.67
CSNK1D-203ENST00000392334 MIR22HGQ0VDD5 57 aa10.83□□□□□ -0.68
CSNK1D-203ENST00000392334 HERC1Q15751 4861 aa10.68□□□□□ -0.7
CSNK1D-203ENST00000392334 A8MUU9 505 aa10.67□□□□□ -0.7
CSNK1D-203ENST00000392334 C20orf166-AS1Q96NR2 134 aa10.66□□□□□ -0.7
CSNK1D-203ENST00000392334 PRAC1Q96KF2 57 aa10.63□□□□□ -0.71
CSNK1D-203ENST00000392334 ADM2Q7Z4H4 148 aa10.6□□□□□ -0.71
CSNK1D-203ENST00000392334 LPAP08519 4548 aa10.59□□□□□ -0.71
CSNK1D-203ENST00000392334 KRTAP3-1Q9BYR8 98 aa10.51□□□□□ -0.73
CSNK1D-203ENST00000392334 XP32Q5T750 250 aa10.5□□□□□ -0.73
CSNK1D-203ENST00000392334 H0YAA0 97 aa10.45□□□□□ -0.74
CSNK1D-203ENST00000392334 LRP2P98164 4655 aa10.45□□□□□ -0.74
CSNK1D-203ENST00000392334 TPRXLQ17RH7 258 aa10.42□□□□□ -0.74
CSNK1D-203ENST00000392334 LINC01554Q52M75 96 aa10.41□□□□□ -0.74
CSNK1D-203ENST00000392334 HMCN2Q8NDA2 5059 aa10.4□□□□□ -0.74
CSNK1D-203ENST00000392334 RPL37P61927 97 aaKnown RBP10.4□□□□□ -0.75
CSNK1D-203ENST00000392334 A0A1B0GU33 70 aa10.39□□□□□ -0.75
CSNK1D-203ENST00000392334 H1FX-AS1Q4G0G2 97 aa10.38□□□□□ -0.75
CSNK1D-203ENST00000392334 COX6B2Q6YFQ2 88 aa10.36□□□□□ -0.75
CSNK1D-203ENST00000392334 CSAG1Q6PB30 78 aa10.34□□□□□ -0.75
CSNK1D-203ENST00000392334 KRTAP25-1Q3LHN0 102 aa10.12□□□□□ -0.79
CSNK1D-203ENST00000392334 K7ERS5 55 aa10.11□□□□□ -0.79
CSNK1D-203ENST00000392334 KRTAP3-3Q9BYR6 98 aa10.08□□□□□ -0.8
CSNK1D-203ENST00000392334 MUC2Q02817 5179 aa10.08□□□□□ -0.8
CSNK1D-203ENST00000392334 UBR4Q5T4S7 5183 aa10.07□□□□□ -0.8
CSNK1D-203ENST00000392334 KRTAP10-6P60371 365 aaPredicted RBP10.05□□□□□ -0.8
CSNK1D-203ENST00000392334 SEC61BP60468 96 aaKnown RBP10.05□□□□□ -0.8
CSNK1D-203ENST00000392334 MUC17Q685J3 4493 aa10□□□□□ -0.81
CSNK1D-203ENST00000392334 KRTAP4-1Q9BYQ7 146 aa9.98□□□□□ -0.81
CSNK1D-203ENST00000392334 KRTAP3-2Q9BYR7 98 aa9.97□□□□□ -0.81
CSNK1D-203ENST00000392334 S4R3F8 94 aa9.95□□□□□ -0.82
CSNK1D-203ENST00000392334 RNF213Q63HN8 5207 aa9.93□□□□□ -0.82
CSNK1D-203ENST00000392334 ROMO1P60602 79 aa9.91□□□□□ -0.82
CSNK1D-203ENST00000392334 KRTAP13-4Q3LI77 160 aa9.91□□□□□ -0.82
CSNK1D-203ENST00000392334 A0A0D9SG42 100 aa9.77□□□□□ -0.85
CSNK1D-203ENST00000392334 P0C880 135 aa9.77□□□□□ -0.85
CSNK1D-203ENST00000392334 CRIPTQ9P021 101 aa9.76□□□□□ -0.85
CSNK1D-203ENST00000392334 FAT4Q6V0I7 4981 aa9.64□□□□□ -0.87
CSNK1D-203ENST00000392334 KRTAP19-2Q3LHN2 52 aa9.63□□□□□ -0.87
CSNK1D-203ENST00000392334 KRTAP12-2P59991 146 aa9.6□□□□□ -0.87
CSNK1D-203ENST00000392334 KRTAP12-1P59990 96 aa9.57□□□□□ -0.88
CSNK1D-203ENST00000392334 M0QZ58 72 aa9.56□□□□□ -0.88
CSNK1D-203ENST00000392334 H3BS24 57 aa9.55□□□□□ -0.88
CSNK1D-203ENST00000392334 LCE2CQ5TA81 110 aa9.51□□□□□ -0.89
CSNK1D-203ENST00000392334 SPINT4Q6UDR6 99 aa9.46□□□□□ -0.9
CSNK1D-203ENST00000392334 C10orf95Q9H7T3 257 aa9.46□□□□□ -0.9
CSNK1D-203ENST00000392334 FLGP20930 4061 aaPredicted RBP9.43□□□□□ -0.9
CSNK1D-203ENST00000392334 MT1HP80294 61 aa9.32□□□□□ -0.92
CSNK1D-203ENST00000392334 KRTAP15-1Q3LI76 137 aa9.26□□□□□ -0.93
CSNK1D-203ENST00000392334 M0R2T5 61 aa9.22□□□□□ -0.93
CSNK1D-203ENST00000392334 R4GN34 69 aa9.21□□□□□ -0.94
CSNK1D-203ENST00000392334 LCE2AQ5TA79 106 aaPredicted RBP9.13□□□□□ -0.95
CSNK1D-203ENST00000392334 LORP23490 312 aaPredicted RBP9.1□□□□□ -0.95
CSNK1D-203ENST00000392334 NDUFAF8A1L188 74 aa8.97□□□□□ -0.97
CSNK1D-203ENST00000392334 KRTAP9-8Q9BYQ0 159 aa8.96□□□□□ -0.98
CSNK1D-203ENST00000392334 MT2AP02795 61 aa8.9□□□□□ -0.99
CSNK1D-203ENST00000392334 MT1FP04733 61 aa8.86□□□□□ -0.99
CSNK1D-203ENST00000392334 KRTAP10-10P60014 251 aa8.83□□□□□ -1
CSNK1D-203ENST00000392334 PP632Q6XCG6 107 aa8.8□□□□□ -1
CSNK1D-203ENST00000392334 PLAC4Q8WY50 150 aa8.78□□□□□ -1
CSNK1D-203ENST00000392334 CAMK2N1Q7Z7J9 78 aa8.73□□□□□ -1.01
CSNK1D-203ENST00000392334 KRTAP19-1Q8IUB9 90 aa8.67□□□□□ -1.02
CSNK1D-203ENST00000392334 SPRR2GQ9BYE4 73 aa8.63□□□□□ -1.03
CSNK1D-203ENST00000392334 KRTAP9-3Q9BYQ3 159 aa8.63□□□□□ -1.03
CSNK1D-203ENST00000392334 KRTAP23-1A1A580 65 aa8.55□□□□□ -1.04
CSNK1D-203ENST00000392334 TNP1P09430 55 aa8.49□□□□□ -1.05
CSNK1D-203ENST00000392334 LCE2BO14633 110 aa8.47□□□□□ -1.05
CSNK1D-203ENST00000392334 USH2AO75445 5202 aa8.42□□□□□ -1.06
CSNK1D-203ENST00000392334 LUZP6Q538Z0 58 aa8.39□□□□□ -1.07
CSNK1D-203ENST00000392334 KRTAP19-8Q3LI54 63 aa8.37□□□□□ -1.07
CSNK1D-203ENST00000392334 FSIP2Q5CZC0 6907 aa8.36□□□□□ -1.07
CSNK1D-203ENST00000392334 MT1BP07438 61 aa8.34□□□□□ -1.07
CSNK1D-203ENST00000392334 LCE2DQ5TA82 110 aaPredicted RBP8.31□□□□□ -1.08
CSNK1D-203ENST00000392334 SPRR5A0A1B0GTR4 108 aa8.27□□□□□ -1.09
CSNK1D-203ENST00000392334 KRTAP9-2Q9BYQ4 174 aa8.2□□□□□ -1.1
CSNK1D-203ENST00000392334 SSPOA2VEC9 5147 aa8.15□□□□□ -1.1
CSNK1D-203ENST00000392334 MT1XP80297 61 aa8.09□□□□□ -1.11
CSNK1D-203ENST00000392334 KRTAP10-5P60370 271 aa8.08□□□□□ -1.12
CSNK1D-203ENST00000392334 A0A0A0MQY5 61 aa8.07□□□□□ -1.12
CSNK1D-203ENST00000392334 LCE3AQ5TA76 89 aa8□□□□□ -1.13
CSNK1D-203ENST00000392334 KRTAP19-6Q3LI70 58 aa7.93□□□□□ -1.14
CSNK1D-203ENST00000392334 PRO2289Q9P1D8 64 aa7.91□□□□□ -1.14
CSNK1D-203ENST00000392334 KRTAP8-1Q8IUC2 63 aa7.88□□□□□ -1.15
CSNK1D-203ENST00000392334 CRCT1Q9UGL9 99 aa7.86□□□□□ -1.15
CSNK1D-203ENST00000392334 FCGBPQ9Y6R7 5405 aaPredicted RBP7.83□□□□□ -1.16
CSNK1D-203ENST00000392334 KRTAP10-7P60409 375 aaPredicted RBP7.83□□□□□ -1.16
CSNK1D-203ENST00000392334 KMT2DO14686 5537 aa7.72□□□□□ -1.17
CSNK1D-203ENST00000392334 KRTAP9-6A0A140TA67 174 aa7.7□□□□□ -1.18
CSNK1D-203ENST00000392334 KRTAP10-12P60413 245 aa7.68□□□□□ -1.18
CSNK1D-203ENST00000392334 KRTAP12-3P60328 96 aa7.62□□□□□ -1.19
CSNK1D-203ENST00000392334 KRTAP4-8A0A0G2JLE6 195 aa7.57□□□□□ -1.2
CSNK1D-203ENST00000392334 KRTAP4-8Q9BYQ9 185 aa7.57□□□□□ -1.2
CSNK1D-203ENST00000392334 MACF1Q9UPN3 7388 aaKnown RBP7.53□□□□□ -1.2
CSNK1D-203ENST00000392334 INE1O15225 51 aa7.37□□□□□ -1.23
CSNK1D-203ENST00000392334 SYNE2Q8WXH0 6885 aaKnown RBP7.36□□□□□ -1.23
CSNK1D-203ENST00000392334 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
CSNK1D-203ENST00000392334 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.28□□□□□ -1.24
CSNK1D-203ENST00000392334 KRTAP19-7Q3SYF9 63 aa7.22□□□□□ -1.25
CSNK1D-203ENST00000392334 LCE3CQ5T5A8 94 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms