RNA–Protein interactions for RNA: ENST00000392202.7

PIKFYVE-203, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 1 (best) BASIC

Gene PIKFYVE, Length 2,039 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-203ENST00000392202 RPS28P62857 69 aaKnown RBP10.87□□□□□ -0.67
PIKFYVE-203ENST00000392202 LCA10Q71F78 164 aa10.86□□□□□ -0.67
PIKFYVE-203ENST00000392202 KRTAP3-3Q9BYR6 98 aa10.82□□□□□ -0.68
PIKFYVE-203ENST00000392202 FLGP20930 4061 aaPredicted RBP10.8□□□□□ -0.68
PIKFYVE-203ENST00000392202 SPTSSBQ8NFR3 76 aa10.76□□□□□ -0.69
PIKFYVE-203ENST00000392202 FAT4Q6V0I7 4981 aa10.75□□□□□ -0.69
PIKFYVE-203ENST00000392202 MT1HP80294 61 aa10.67□□□□□ -0.7
PIKFYVE-203ENST00000392202 CSAG1Q6PB30 78 aa10.67□□□□□ -0.7
PIKFYVE-203ENST00000392202 SMIM26A0A096LP01 95 aa10.67□□□□□ -0.7
PIKFYVE-203ENST00000392202 LINC01558Q9Y6Z2 57 aa10.53□□□□□ -0.72
PIKFYVE-203ENST00000392202 Q1T7F1 81 aa10.51□□□□□ -0.73
PIKFYVE-203ENST00000392202 M0R2T5 61 aa10.51□□□□□ -0.73
PIKFYVE-203ENST00000392202 V9GYY9 64 aa10.5□□□□□ -0.73
PIKFYVE-203ENST00000392202 H0YAA0 97 aa10.46□□□□□ -0.73
PIKFYVE-203ENST00000392202 LCE2AQ5TA79 106 aaPredicted RBP10.46□□□□□ -0.73
PIKFYVE-203ENST00000392202 A0A1B0GU69 56 aa10.41□□□□□ -0.74
PIKFYVE-203ENST00000392202 SEC61GP60059 68 aa10.4□□□□□ -0.75
PIKFYVE-203ENST00000392202 ADM2Q7Z4H4 148 aa10.38□□□□□ -0.75
PIKFYVE-203ENST00000392202 KRTAP3-2Q9BYR7 98 aa10.38□□□□□ -0.75
PIKFYVE-203ENST00000392202 PRR15LQ9BU68 103 aa10.36□□□□□ -0.75
PIKFYVE-203ENST00000392202 KRTAP10-6P60371 365 aaPredicted RBP10.34□□□□□ -0.75
PIKFYVE-203ENST00000392202 PSPHP1O15172 72 aa10.3□□□□□ -0.76
PIKFYVE-203ENST00000392202 P0C880 135 aa10.29□□□□□ -0.76
PIKFYVE-203ENST00000392202 LORP23490 312 aaPredicted RBP10.26□□□□□ -0.77
PIKFYVE-203ENST00000392202 KRTAP9-8Q9BYQ0 159 aa10.26□□□□□ -0.77
PIKFYVE-203ENST00000392202 Q5VV11 94 aa10.25□□□□□ -0.77
PIKFYVE-203ENST00000392202 MT2AP02795 61 aa10.21□□□□□ -0.78
PIKFYVE-203ENST00000392202 A0A1B0GU33 70 aa10.16□□□□□ -0.78
PIKFYVE-203ENST00000392202 MT1FP04733 61 aa10.14□□□□□ -0.79
PIKFYVE-203ENST00000392202 KRTAP10-10P60014 251 aa10.09□□□□□ -0.79
PIKFYVE-203ENST00000392202 CRIPTQ9P021 101 aa10.07□□□□□ -0.8
PIKFYVE-203ENST00000392202 UQCR11O14957 56 aa10.06□□□□□ -0.8
PIKFYVE-203ENST00000392202 M0QZ58 72 aa10.03□□□□□ -0.8
PIKFYVE-203ENST00000392202 KRTAP13-4Q3LI77 160 aa10.03□□□□□ -0.8
PIKFYVE-203ENST00000392202 R4GN34 69 aa10.02□□□□□ -0.81
PIKFYVE-203ENST00000392202 A6NED7 52 aa10□□□□□ -0.81
PIKFYVE-203ENST00000392202 SPATA8Q6RVD6 105 aa9.98□□□□□ -0.81
PIKFYVE-203ENST00000392202 MIR22HGQ0VDD5 57 aa9.92□□□□□ -0.82
PIKFYVE-203ENST00000392202 SPRR2GQ9BYE4 73 aa9.91□□□□□ -0.82
PIKFYVE-203ENST00000392202 KRTAP9-3Q9BYQ3 159 aa9.9□□□□□ -0.82
PIKFYVE-203ENST00000392202 KRTAP19-1Q8IUB9 90 aa9.89□□□□□ -0.83
PIKFYVE-203ENST00000392202 CDC42SE1Q9NRR8 79 aa9.82□□□□□ -0.84
PIKFYVE-203ENST00000392202 A8MU10 97 aa9.82□□□□□ -0.84
PIKFYVE-203ENST00000392202 LINC01554Q52M75 96 aa9.79□□□□□ -0.84
PIKFYVE-203ENST00000392202 A0A0D9SG42 100 aa9.78□□□□□ -0.84
PIKFYVE-203ENST00000392202 BRK1Q8WUW1 75 aa9.72□□□□□ -0.85
PIKFYVE-203ENST00000392202 KRTAP19-8Q3LI54 63 aa9.7□□□□□ -0.86
PIKFYVE-203ENST00000392202 A6NN06 94 aa9.69□□□□□ -0.86
PIKFYVE-203ENST00000392202 LCE2BO14633 110 aa9.66□□□□□ -0.86
PIKFYVE-203ENST00000392202 KRTAP12-1P59990 96 aa9.65□□□□□ -0.87
PIKFYVE-203ENST00000392202 LCE2DQ5TA82 110 aaPredicted RBP9.61□□□□□ -0.87
PIKFYVE-203ENST00000392202 KRTAP12-2P59991 146 aa9.59□□□□□ -0.87
PIKFYVE-203ENST00000392202 SPINT4Q6UDR6 99 aa9.58□□□□□ -0.88
PIKFYVE-203ENST00000392202 MT1BP07438 61 aa9.57□□□□□ -0.88
PIKFYVE-203ENST00000392202 K7ERS5 55 aa9.51□□□□□ -0.89
PIKFYVE-203ENST00000392202 PLAC4Q8WY50 150 aa9.5□□□□□ -0.89
PIKFYVE-203ENST00000392202 USH2AO75445 5202 aa9.47□□□□□ -0.89
PIKFYVE-203ENST00000392202 KRTAP9-2Q9BYQ4 174 aa9.42□□□□□ -0.9
PIKFYVE-203ENST00000392202 PRO0628Q9UI54 55 aa9.41□□□□□ -0.9
PIKFYVE-203ENST00000392202 CAMK2N1Q7Z7J9 78 aa9.35□□□□□ -0.91
PIKFYVE-203ENST00000392202 MT1XP80297 61 aa9.21□□□□□ -0.94
PIKFYVE-203ENST00000392202 SSPOA2VEC9 5147 aa9.2□□□□□ -0.94
PIKFYVE-203ENST00000392202 KRTAP10-5P60370 271 aa9.18□□□□□ -0.94
PIKFYVE-203ENST00000392202 PMAIP1Q13794 54 aa9.18□□□□□ -0.94
PIKFYVE-203ENST00000392202 KRTAP19-6Q3LI70 58 aa9.13□□□□□ -0.95
PIKFYVE-203ENST00000392202 C10orf95Q9H7T3 257 aa9.13□□□□□ -0.95
PIKFYVE-203ENST00000392202 FSIP2Q5CZC0 6907 aa9.13□□□□□ -0.95
PIKFYVE-203ENST00000392202 PRO2289Q9P1D8 64 aa9.12□□□□□ -0.95
PIKFYVE-203ENST00000392202 ROMO1P60602 79 aa9.09□□□□□ -0.95
PIKFYVE-203ENST00000392202 CRCT1Q9UGL9 99 aa9.04□□□□□ -0.96
PIKFYVE-203ENST00000392202 TNP1P09430 55 aa8.88□□□□□ -0.99
PIKFYVE-203ENST00000392202 KRTAP25-1Q3LHN0 102 aa8.87□□□□□ -0.99
PIKFYVE-203ENST00000392202 FCGBPQ9Y6R7 5405 aaPredicted RBP8.87□□□□□ -0.99
PIKFYVE-203ENST00000392202 KRTAP10-7P60409 375 aaPredicted RBP8.81□□□□□ -1
PIKFYVE-203ENST00000392202 KRTAP9-6A0A140TA67 174 aa8.8□□□□□ -1
PIKFYVE-203ENST00000392202 KTN1-AS1Q86SY8 53 aa8.76□□□□□ -1.01
PIKFYVE-203ENST00000392202 KRTAP10-12P60413 245 aa8.75□□□□□ -1.01
PIKFYVE-203ENST00000392202 PRAC1Q96KF2 57 aa8.63□□□□□ -1.03
PIKFYVE-203ENST00000392202 KRTAP23-1A1A580 65 aa8.59□□□□□ -1.03
PIKFYVE-203ENST00000392202 LCE3AQ5TA76 89 aa8.55□□□□□ -1.04
PIKFYVE-203ENST00000392202 PP632Q6XCG6 107 aa8.52□□□□□ -1.05
PIKFYVE-203ENST00000392202 KRTAP4-8A0A0G2JLE6 195 aa8.5□□□□□ -1.05
PIKFYVE-203ENST00000392202 KRTAP4-8Q9BYQ9 185 aa8.5□□□□□ -1.05
PIKFYVE-203ENST00000392202 KMT2DO14686 5537 aa8.44□□□□□ -1.06
PIKFYVE-203ENST00000392202 KRTAP8-1Q8IUC2 63 aa8.39□□□□□ -1.07
PIKFYVE-203ENST00000392202 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.38□□□□□ -1.07
PIKFYVE-203ENST00000392202 MACF1Q9UPN3 7388 aaKnown RBP8.36□□□□□ -1.07
PIKFYVE-203ENST00000392202 KRTAP19-5Q3LI72 72 aa8.25□□□□□ -1.09
PIKFYVE-203ENST00000392202 SVIPQ8NHG7 77 aa8.23□□□□□ -1.09
PIKFYVE-203ENST00000392202 KRTAP19-7Q3SYF9 63 aa8.22□□□□□ -1.09
PIKFYVE-203ENST00000392202 KRTAP12-3P60328 96 aa8.21□□□□□ -1.1
PIKFYVE-203ENST00000392202 SYNE2Q8WXH0 6885 aaKnown RBP8.13□□□□□ -1.11
PIKFYVE-203ENST00000392202 MT1EP04732 61 aa8.09□□□□□ -1.11
PIKFYVE-203ENST00000392202 KRTAP6-3Q3LI67 103 aa8.08□□□□□ -1.12
PIKFYVE-203ENST00000392202 KRTAP5-9P26371 169 aa8.07□□□□□ -1.12
PIKFYVE-203ENST00000392202 SPRR2FQ96RM1 72 aa8.07□□□□□ -1.12
PIKFYVE-203ENST00000392202 KRTAP9-7A8MTY7 169 aa8.02□□□□□ -1.13
PIKFYVE-203ENST00000392202 KRTAP15-1Q3LI76 137 aa8□□□□□ -1.13
PIKFYVE-203ENST00000392202 MUC12Q9UKN1 5478 aa7.91□□□□□ -1.14
PIKFYVE-203ENST00000392202 MT1LQ93083 61 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms