RNA–Protein interactions for RNA: ENST00000391942.6

ERCC2-202, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC2, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-202ENST00000391942 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
ERCC2-202ENST00000391942 SPANXA2-OT1Q8N9U9 137 aa8.56□□□□□ -1.04
ERCC2-202ENST00000391942 FAT4Q6V0I7 4981 aa8.52□□□□□ -1.05
ERCC2-202ENST00000391942 KRTAP3-1Q9BYR8 98 aa8.48□□□□□ -1.05
ERCC2-202ENST00000391942 MT1HP80294 61 aa8.44□□□□□ -1.06
ERCC2-202ENST00000391942 H1FX-AS1Q4G0G2 97 aa8.44□□□□□ -1.06
ERCC2-202ENST00000391942 KTN1-AS1Q86SY8 53 aa8.43□□□□□ -1.06
ERCC2-202ENST00000391942 PSPHP1O15172 72 aa8.4□□□□□ -1.06
ERCC2-202ENST00000391942 FLGP20930 4061 aaPredicted RBP8.38□□□□□ -1.07
ERCC2-202ENST00000391942 Q5VV11 94 aa8.38□□□□□ -1.07
ERCC2-202ENST00000391942 A8MUN3 132 aa8.37□□□□□ -1.07
ERCC2-202ENST00000391942 M0R2T5 61 aa8.36□□□□□ -1.07
ERCC2-202ENST00000391942 CHKB-CPT1BH3BT56 60 aa8.35□□□□□ -1.07
ERCC2-202ENST00000391942 LCE2AQ5TA79 106 aaPredicted RBP8.35□□□□□ -1.07
ERCC2-202ENST00000391942 DMAC1Q96GE9 116 aa8.32□□□□□ -1.08
ERCC2-202ENST00000391942 S4R3F8 94 aa8.32□□□□□ -1.08
ERCC2-202ENST00000391942 CDC42SE1Q9NRR8 79 aa8.29□□□□□ -1.08
ERCC2-202ENST00000391942 LCA10Q71F78 164 aa8.27□□□□□ -1.09
ERCC2-202ENST00000391942 PRR15LQ9BU68 103 aa8.27□□□□□ -1.09
ERCC2-202ENST00000391942 A6NED7 52 aa8.25□□□□□ -1.09
ERCC2-202ENST00000391942 LINC01558Q9Y6Z2 57 aa8.24□□□□□ -1.09
ERCC2-202ENST00000391942 ACYP2P14621 99 aa8.23□□□□□ -1.09
ERCC2-202ENST00000391942 A6NN06 94 aa8.22□□□□□ -1.09
ERCC2-202ENST00000391942 COA5Q86WW8 74 aa8.19□□□□□ -1.1
ERCC2-202ENST00000391942 KRTAP3-3Q9BYR6 98 aa8.19□□□□□ -1.1
ERCC2-202ENST00000391942 KRTAP10-6P60371 365 aaPredicted RBP8.19□□□□□ -1.1
ERCC2-202ENST00000391942 SPTSSBQ8NFR3 76 aa8.19□□□□□ -1.1
ERCC2-202ENST00000391942 CSAG1Q6PB30 78 aa8.15□□□□□ -1.1
ERCC2-202ENST00000391942 LORP23490 312 aaPredicted RBP8.13□□□□□ -1.11
ERCC2-202ENST00000391942 KRTAP9-8Q9BYQ0 159 aa8.06□□□□□ -1.12
ERCC2-202ENST00000391942 MT2AP02795 61 aa8.02□□□□□ -1.13
ERCC2-202ENST00000391942 A8MU10 97 aa8.01□□□□□ -1.13
ERCC2-202ENST00000391942 MT1FP04733 61 aa7.97□□□□□ -1.13
ERCC2-202ENST00000391942 KRTAP10-10P60014 251 aa7.95□□□□□ -1.14
ERCC2-202ENST00000391942 ADM2Q7Z4H4 148 aa7.9□□□□□ -1.14
ERCC2-202ENST00000391942 H0YAA0 97 aa7.88□□□□□ -1.15
ERCC2-202ENST00000391942 LINC01554Q52M75 96 aa7.85□□□□□ -1.15
ERCC2-202ENST00000391942 SPATA8Q6RVD6 105 aa7.84□□□□□ -1.15
ERCC2-202ENST00000391942 P0C880 135 aa7.81□□□□□ -1.16
ERCC2-202ENST00000391942 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
ERCC2-202ENST00000391942 A0A1B0GU69 56 aa7.79□□□□□ -1.16
ERCC2-202ENST00000391942 UQCR11O14957 56 aa7.78□□□□□ -1.16
ERCC2-202ENST00000391942 KRTAP9-3Q9BYQ3 159 aa7.78□□□□□ -1.16
ERCC2-202ENST00000391942 MIR22HGQ0VDD5 57 aa7.72□□□□□ -1.17
ERCC2-202ENST00000391942 LCE2DQ5TA82 110 aaPredicted RBP7.72□□□□□ -1.17
ERCC2-202ENST00000391942 KRTAP9-2Q9BYQ4 174 aa7.69□□□□□ -1.18
ERCC2-202ENST00000391942 CRIPTQ9P021 101 aa7.68□□□□□ -1.18
ERCC2-202ENST00000391942 KRTAP19-1Q8IUB9 90 aa7.67□□□□□ -1.18
ERCC2-202ENST00000391942 LCE2BO14633 110 aa7.65□□□□□ -1.18
ERCC2-202ENST00000391942 SPRR2GQ9BYE4 73 aa7.63□□□□□ -1.19
ERCC2-202ENST00000391942 R4GN34 69 aa7.63□□□□□ -1.19
ERCC2-202ENST00000391942 M0QZ58 72 aa7.62□□□□□ -1.19
ERCC2-202ENST00000391942 PRAC1Q96KF2 57 aa7.62□□□□□ -1.19
ERCC2-202ENST00000391942 KRTAP9-6A0A140TA67 174 aa7.58□□□□□ -1.2
ERCC2-202ENST00000391942 H3BS24 57 aa7.56□□□□□ -1.2
ERCC2-202ENST00000391942 A0A1B0GU33 70 aa7.54□□□□□ -1.2
ERCC2-202ENST00000391942 KRTAP13-4Q3LI77 160 aa7.52□□□□□ -1.21
ERCC2-202ENST00000391942 USH2AO75445 5202 aa7.5□□□□□ -1.21
ERCC2-202ENST00000391942 KRTAP19-8Q3LI54 63 aa7.49□□□□□ -1.21
ERCC2-202ENST00000391942 MT1BP07438 61 aa7.44□□□□□ -1.22
ERCC2-202ENST00000391942 FSIP2Q5CZC0 6907 aa7.42□□□□□ -1.22
ERCC2-202ENST00000391942 A0A0D9SG42 100 aa7.38□□□□□ -1.23
ERCC2-202ENST00000391942 KRTAP25-1Q3LHN0 102 aa7.38□□□□□ -1.23
ERCC2-202ENST00000391942 K7ERS5 55 aa7.36□□□□□ -1.23
ERCC2-202ENST00000391942 PLAC4Q8WY50 150 aa7.33□□□□□ -1.24
ERCC2-202ENST00000391942 CRCT1Q9UGL9 99 aa7.33□□□□□ -1.24
ERCC2-202ENST00000391942 SSPOA2VEC9 5147 aa7.31□□□□□ -1.24
ERCC2-202ENST00000391942 ROMO1P60602 79 aa7.31□□□□□ -1.24
ERCC2-202ENST00000391942 KRTAP19-6Q3LI70 58 aa7.24□□□□□ -1.25
ERCC2-202ENST00000391942 SPINT4Q6UDR6 99 aa7.23□□□□□ -1.25
ERCC2-202ENST00000391942 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
ERCC2-202ENST00000391942 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
ERCC2-202ENST00000391942 KRTAP10-5P60370 271 aa7.14□□□□□ -1.27
ERCC2-202ENST00000391942 MT1XP80297 61 aa7.12□□□□□ -1.27
ERCC2-202ENST00000391942 CAMK2N1Q7Z7J9 78 aa7.12□□□□□ -1.27
ERCC2-202ENST00000391942 FCGBPQ9Y6R7 5405 aaPredicted RBP7.08□□□□□ -1.28
ERCC2-202ENST00000391942 PRO2289Q9P1D8 64 aa7.07□□□□□ -1.28
ERCC2-202ENST00000391942 KRTAP10-7P60409 375 aaPredicted RBP6.84□□□□□ -1.31
ERCC2-202ENST00000391942 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
ERCC2-202ENST00000391942 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
ERCC2-202ENST00000391942 KRTAP15-1Q3LI76 137 aa6.78□□□□□ -1.32
ERCC2-202ENST00000391942 KRTAP9-7A8MTY7 169 aa6.76□□□□□ -1.33
ERCC2-202ENST00000391942 KRTAP10-12P60413 245 aa6.74□□□□□ -1.33
ERCC2-202ENST00000391942 MACF1Q9UPN3 7388 aaKnown RBP6.74□□□□□ -1.33
ERCC2-202ENST00000391942 TNP1P09430 55 aa6.68□□□□□ -1.34
ERCC2-202ENST00000391942 KRTAP4-8A0A0G2JLE6 195 aa6.67□□□□□ -1.34
ERCC2-202ENST00000391942 NDUFAF8A1L188 74 aa6.67□□□□□ -1.34
ERCC2-202ENST00000391942 KRTAP4-8Q9BYQ9 185 aa6.67□□□□□ -1.34
ERCC2-202ENST00000391942 KMT2DO14686 5537 aa6.64□□□□□ -1.35
ERCC2-202ENST00000391942 SYNE2Q8WXH0 6885 aaKnown RBP6.59□□□□□ -1.35
ERCC2-202ENST00000391942 KRTAP8-1Q8IUC2 63 aa6.58□□□□□ -1.36
ERCC2-202ENST00000391942 KRTAP6-3Q3LI67 103 aa6.5□□□□□ -1.37
ERCC2-202ENST00000391942 LCE3AQ5TA76 89 aa6.5□□□□□ -1.37
ERCC2-202ENST00000391942 SPRR2FQ96RM1 72 aa6.44□□□□□ -1.38
ERCC2-202ENST00000391942 KRTAP5-9P26371 169 aa6.43□□□□□ -1.38
ERCC2-202ENST00000391942 A0A0A0MQY5 61 aa6.39□□□□□ -1.39
ERCC2-202ENST00000391942 KRTAP19-5Q3LI72 72 aa6.37□□□□□ -1.39
ERCC2-202ENST00000391942 LUZP6Q538Z0 58 aa6.36□□□□□ -1.39
ERCC2-202ENST00000391942 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.39
ERCC2-202ENST00000391942 PP632Q6XCG6 107 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms