RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 A8MUN3 132 aa7.08□□□□□ -1.28
IGHV3-53-201ENST00000390627 CRCT1Q9UGL9 99 aa7.08□□□□□ -1.28
IGHV3-53-201ENST00000390627 KRTAP9-3Q9BYQ3 159 aa7.07□□□□□ -1.28
IGHV3-53-201ENST00000390627 TRAV7A0A075B6U4 112 aa7.06□□□□□ -1.28
IGHV3-53-201ENST00000390627 NDUFC1O43677 76 aa6.98□□□□□ -1.29
IGHV3-53-201ENST00000390627 USH2AO75445 5202 aa6.94□□□□□ -1.3
IGHV3-53-201ENST00000390627 DMAC1Q96GE9 116 aa6.94□□□□□ -1.3
IGHV3-53-201ENST00000390627 SERP2Q8N6R1 65 aa6.9□□□□□ -1.3
IGHV3-53-201ENST00000390627 LOC100996750A0A140TA64 210 aa6.88□□□□□ -1.31
IGHV3-53-201ENST00000390627 KRTAP4-6Q9BYQ5 205 aa6.88□□□□□ -1.31
IGHV3-53-201ENST00000390627 SNURFQ9Y675 71 aa6.87□□□□□ -1.31
IGHV3-53-201ENST00000390627 H0YAA0 97 aa6.85□□□□□ -1.31
IGHV3-53-201ENST00000390627 C20orf197Q8N268 126 aa6.85□□□□□ -1.31
IGHV3-53-201ENST00000390627 ACYP2P14621 99 aa6.83□□□□□ -1.32
IGHV3-53-201ENST00000390627 SSPOA2VEC9 5147 aa6.83□□□□□ -1.32
IGHV3-53-201ENST00000390627 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
IGHV3-53-201ENST00000390627 CRIPTQ9P021 101 aa6.8□□□□□ -1.32
IGHV3-53-201ENST00000390627 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
IGHV3-53-201ENST00000390627 SPANXA2-OT1Q8N9U9 137 aa6.78□□□□□ -1.32
IGHV3-53-201ENST00000390627 ADM2Q7Z4H4 148 aa6.77□□□□□ -1.33
IGHV3-53-201ENST00000390627 COX7CP15954 63 aa6.75□□□□□ -1.33
IGHV3-53-201ENST00000390627 KRTAP19-6Q3LI70 58 aa6.73□□□□□ -1.33
IGHV3-53-201ENST00000390627 SPTSSBQ8NFR3 76 aa6.73□□□□□ -1.33
IGHV3-53-201ENST00000390627 CHKB-CPT1BH3BT56 60 aa6.72□□□□□ -1.33
IGHV3-53-201ENST00000390627 Q5VV11 94 aa6.71□□□□□ -1.34
IGHV3-53-201ENST00000390627 KRTAP19-8Q3LI54 63 aa6.7□□□□□ -1.34
IGHV3-53-201ENST00000390627 FCGBPQ9Y6R7 5405 aaPredicted RBP6.67□□□□□ -1.34
IGHV3-53-201ENST00000390627 MT1BP07438 61 aa6.66□□□□□ -1.34
IGHV3-53-201ENST00000390627 ANAPC13Q9BS18 74 aa6.64□□□□□ -1.35
IGHV3-53-201ENST00000390627 P0C880 135 aa6.63□□□□□ -1.35
IGHV3-53-201ENST00000390627 R4GN34 69 aa6.6□□□□□ -1.35
IGHV3-53-201ENST00000390627 H7BZZ5 65 aa6.59□□□□□ -1.35
IGHV3-53-201ENST00000390627 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.58□□□□□ -1.36
IGHV3-53-201ENST00000390627 CYSTM1Q9H1C7 97 aa6.57□□□□□ -1.36
IGHV3-53-201ENST00000390627 COA5Q86WW8 74 aa6.56□□□□□ -1.36
IGHV3-53-201ENST00000390627 M0QZ58 72 aa6.55□□□□□ -1.36
IGHV3-53-201ENST00000390627 A6NN06 94 aa6.53□□□□□ -1.36
IGHV3-53-201ENST00000390627 MACF1Q9UPN3 7388 aaKnown RBP6.53□□□□□ -1.36
IGHV3-53-201ENST00000390627 CCDC179H3BU77 68 aa6.47□□□□□ -1.37
IGHV3-53-201ENST00000390627 KRTAP10-5P60370 271 aa6.47□□□□□ -1.37
IGHV3-53-201ENST00000390627 PLAC4Q8WY50 150 aa6.45□□□□□ -1.38
IGHV3-53-201ENST00000390627 LINC01554Q52M75 96 aa6.44□□□□□ -1.38
IGHV3-53-201ENST00000390627 KRTAP9-7A8MTY7 169 aa6.43□□□□□ -1.38
IGHV3-53-201ENST00000390627 SEC61GP60059 68 aa6.4□□□□□ -1.38
IGHV3-53-201ENST00000390627 SYNE2Q8WXH0 6885 aaKnown RBP6.39□□□□□ -1.39
IGHV3-53-201ENST00000390627 ATP5EP56381 51 aaPredicted RBP6.39□□□□□ -1.39
IGHV3-53-201ENST00000390627 PRO2289Q9P1D8 64 aa6.37□□□□□ -1.39
IGHV3-53-201ENST00000390627 SERP1Q9Y6X1 66 aa6.37□□□□□ -1.39
IGHV3-53-201ENST00000390627 MT1XP80297 61 aa6.3□□□□□ -1.4
IGHV3-53-201ENST00000390627 TMEM258P61165 79 aa6.29□□□□□ -1.4
IGHV3-53-201ENST00000390627 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
IGHV3-53-201ENST00000390627 KRTAP13-4Q3LI77 160 aa6.28□□□□□ -1.4
IGHV3-53-201ENST00000390627 A0A1B0GU69 56 aa6.24□□□□□ -1.41
IGHV3-53-201ENST00000390627 KRTAP6-3Q3LI67 103 aa6.24□□□□□ -1.41
IGHV3-53-201ENST00000390627 A0A1B0GU33 70 aa6.23□□□□□ -1.41
IGHV3-53-201ENST00000390627 SPATA8Q6RVD6 105 aa6.16□□□□□ -1.42
IGHV3-53-201ENST00000390627 PRR15LQ9BU68 103 aa6.15□□□□□ -1.42
IGHV3-53-201ENST00000390627 A0A0D9SG42 100 aa6.14□□□□□ -1.43
IGHV3-53-201ENST00000390627 KRTAP12-2P59991 146 aa6.13□□□□□ -1.43
IGHV3-53-201ENST00000390627 CAMK2N1Q7Z7J9 78 aa6.11□□□□□ -1.43
IGHV3-53-201ENST00000390627 LINC01558Q9Y6Z2 57 aa6.1□□□□□ -1.43
IGHV3-53-201ENST00000390627 SMIM26A0A096LP01 95 aa6.08□□□□□ -1.44
IGHV3-53-201ENST00000390627 KRTAP5-9P26371 169 aa6.05□□□□□ -1.44
IGHV3-53-201ENST00000390627 SPINT4Q6UDR6 99 aa6.05□□□□□ -1.44
IGHV3-53-201ENST00000390627 KMT2DO14686 5537 aa6.04□□□□□ -1.44
IGHV3-53-201ENST00000390627 KRTAP12-1P59990 96 aa6.01□□□□□ -1.45
IGHV3-53-201ENST00000390627 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
IGHV3-53-201ENST00000390627 KRTAP10-12P60413 245 aa6□□□□□ -1.45
IGHV3-53-201ENST00000390627 NEBP20929 6669 aa6□□□□□ -1.45
IGHV3-53-201ENST00000390627 MUC12Q9UKN1 5478 aa5.99□□□□□ -1.45
IGHV3-53-201ENST00000390627 LCE3BQ5TA77 95 aa5.99□□□□□ -1.45
IGHV3-53-201ENST00000390627 KRTAP8-1Q8IUC2 63 aa5.99□□□□□ -1.45
IGHV3-53-201ENST00000390627 KRTAP4-12Q9BQ66 201 aa5.99□□□□□ -1.45
IGHV3-53-201ENST00000390627 A8MU10 97 aa5.97□□□□□ -1.45
IGHV3-53-201ENST00000390627 PCP4P48539 62 aa5.95□□□□□ -1.46
IGHV3-53-201ENST00000390627 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
IGHV3-53-201ENST00000390627 UQCR11O14957 56 aa5.93□□□□□ -1.46
IGHV3-53-201ENST00000390627 SPRR2FQ96RM1 72 aa5.93□□□□□ -1.46
IGHV3-53-201ENST00000390627 V9GYY9 64 aa5.92□□□□□ -1.46
IGHV3-53-201ENST00000390627 KRTAP9-9Q9BYP9 154 aa5.9□□□□□ -1.46
IGHV3-53-201ENST00000390627 KRTAP9-4Q9BYQ2 154 aa5.9□□□□□ -1.46
IGHV3-53-201ENST00000390627 Q1T7F1 81 aa5.86□□□□□ -1.47
IGHV3-53-201ENST00000390627 MDN1Q9NU22 5596 aa5.84□□□□□ -1.47
IGHV3-53-201ENST00000390627 PSPHP1O15172 72 aa5.81□□□□□ -1.48
IGHV3-53-201ENST00000390627 MIR22HGQ0VDD5 57 aa5.81□□□□□ -1.48
IGHV3-53-201ENST00000390627 SPRR2EP22531 72 aa5.8□□□□□ -1.48
IGHV3-53-201ENST00000390627 SPRR2BP35325 72 aa5.8□□□□□ -1.48
IGHV3-53-201ENST00000390627 SPRR2AP35326 72 aa5.8□□□□□ -1.48
IGHV3-53-201ENST00000390627 RPS28P62857 69 aaKnown RBP5.76□□□□□ -1.49
IGHV3-53-201ENST00000390627 LCE1AQ5T7P2 110 aa5.73□□□□□ -1.49
IGHV3-53-201ENST00000390627 C10orf95Q9H7T3 257 aa5.72□□□□□ -1.49
IGHV3-53-201ENST00000390627 TNP1P09430 55 aa5.7□□□□□ -1.5
IGHV3-53-201ENST00000390627 K7ERS5 55 aa5.69□□□□□ -1.5
IGHV3-53-201ENST00000390627 KRTAP20-1Q3LI63 56 aa5.67□□□□□ -1.5
IGHV3-53-201ENST00000390627 A6NED7 52 aa5.65□□□□□ -1.5
IGHV3-53-201ENST00000390627 KRTAP19-7Q3SYF9 63 aa5.63□□□□□ -1.51
IGHV3-53-201ENST00000390627 SPRR2DP22532 72 aa5.6□□□□□ -1.51
IGHV3-53-201ENST00000390627 KRTAP2-3P0C7H8 128 aa5.59□□□□□ -1.51
IGHV3-53-201ENST00000390627 LCE1DQ5T752 114 aa5.59□□□□□ -1.51
IGHV3-53-201ENST00000390627 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms