RNA–Protein interactions for RNA: ENST00000384782.1

RNU1-3-201, Transcript of RNA, U1 small nuclear 3, humanhuman

BASIC

Gene RNU1-3, Length 164 nt, Biotype snRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-3-201ENST00000384782 CSAG1Q6PB30 78 aa4.35□□□□□ -1.71
RNU1-3-201ENST00000384782 V9GYY9 64 aa4.34□□□□□ -1.71
RNU1-3-201ENST00000384782 KRTAP3-3Q9BYR6 98 aa4.32□□□□□ -1.72
RNU1-3-201ENST00000384782 LCE2CQ5TA81 110 aa4.31□□□□□ -1.72
RNU1-3-201ENST00000384782 SEC61GP60059 68 aa4.29□□□□□ -1.72
RNU1-3-201ENST00000384782 Q1T7F1 81 aa4.28□□□□□ -1.72
RNU1-3-201ENST00000384782 LINC01558Q9Y6Z2 57 aa4.28□□□□□ -1.72
RNU1-3-201ENST00000384782 PRR15LQ9BU68 103 aa4.27□□□□□ -1.73
RNU1-3-201ENST00000384782 H0YAA0 97 aa4.26□□□□□ -1.73
RNU1-3-201ENST00000384782 M0R2T5 61 aa4.26□□□□□ -1.73
RNU1-3-201ENST00000384782 MT1HP80294 61 aa4.25□□□□□ -1.73
RNU1-3-201ENST00000384782 UBR4Q5T4S7 5183 aa4.25□□□□□ -1.73
RNU1-3-201ENST00000384782 A0A1B0GU69 56 aa4.24□□□□□ -1.73
RNU1-3-201ENST00000384782 RNF213Q63HN8 5207 aa4.21□□□□□ -1.74
RNU1-3-201ENST00000384782 MUC2Q02817 5179 aa4.2□□□□□ -1.74
RNU1-3-201ENST00000384782 ADM2Q7Z4H4 148 aa4.19□□□□□ -1.74
RNU1-3-201ENST00000384782 PSPHP1O15172 72 aa4.16□□□□□ -1.74
RNU1-3-201ENST00000384782 A0A1B0GU33 70 aa4.14□□□□□ -1.75
RNU1-3-201ENST00000384782 KRTAP10-6P60371 365 aaPredicted RBP4.14□□□□□ -1.75
RNU1-3-201ENST00000384782 LCE2AQ5TA79 106 aaPredicted RBP4.14□□□□□ -1.75
RNU1-3-201ENST00000384782 KRTAP3-2Q9BYR7 98 aa4.14□□□□□ -1.75
RNU1-3-201ENST00000384782 Q5VV11 94 aa4.13□□□□□ -1.75
RNU1-3-201ENST00000384782 CRIPTQ9P021 101 aa4.13□□□□□ -1.75
RNU1-3-201ENST00000384782 UQCR11O14957 56 aa4.12□□□□□ -1.75
RNU1-3-201ENST00000384782 P0C880 135 aa4.12□□□□□ -1.75
RNU1-3-201ENST00000384782 M0QZ58 72 aa4.11□□□□□ -1.75
RNU1-3-201ENST00000384782 FLGP20930 4061 aaPredicted RBP4.11□□□□□ -1.75
RNU1-3-201ENST00000384782 LORP23490 312 aaPredicted RBP4.09□□□□□ -1.75
RNU1-3-201ENST00000384782 A6NED7 52 aa4.08□□□□□ -1.76
RNU1-3-201ENST00000384782 FAT4Q6V0I7 4981 aa4.08□□□□□ -1.76
RNU1-3-201ENST00000384782 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
RNU1-3-201ENST00000384782 R4GN34 69 aa4.08□□□□□ -1.76
RNU1-3-201ENST00000384782 KRTAP10-10P60014 251 aa4.07□□□□□ -1.76
RNU1-3-201ENST00000384782 MT2AP02795 61 aa4.06□□□□□ -1.76
RNU1-3-201ENST00000384782 MIR22HGQ0VDD5 57 aa4.04□□□□□ -1.76
RNU1-3-201ENST00000384782 MT1FP04733 61 aa4.02□□□□□ -1.77
RNU1-3-201ENST00000384782 SPATA8Q6RVD6 105 aa4.02□□□□□ -1.77
RNU1-3-201ENST00000384782 SVIPQ8NHG7 77 aa4□□□□□ -1.77
RNU1-3-201ENST00000384782 CDC42SE1Q9NRR8 79 aa4□□□□□ -1.77
RNU1-3-201ENST00000384782 SPRR2GQ9BYE4 73 aa3.99□□□□□ -1.77
RNU1-3-201ENST00000384782 KRTAP13-4Q3LI77 160 aa3.98□□□□□ -1.77
RNU1-3-201ENST00000384782 A6NN06 94 aa3.95□□□□□ -1.78
RNU1-3-201ENST00000384782 K7ERS5 55 aa3.95□□□□□ -1.78
RNU1-3-201ENST00000384782 LINC01554Q52M75 96 aa3.95□□□□□ -1.78
RNU1-3-201ENST00000384782 BRK1Q8WUW1 75 aa3.95□□□□□ -1.78
RNU1-3-201ENST00000384782 KRTAP9-3Q9BYQ3 159 aa3.95□□□□□ -1.78
RNU1-3-201ENST00000384782 A0A0D9SG42 100 aa3.94□□□□□ -1.78
RNU1-3-201ENST00000384782 KRTAP19-1Q8IUB9 90 aa3.94□□□□□ -1.78
RNU1-3-201ENST00000384782 A8MU10 97 aa3.93□□□□□ -1.78
RNU1-3-201ENST00000384782 KRTAP19-8Q3LI54 63 aa3.89□□□□□ -1.79
RNU1-3-201ENST00000384782 KRTAP12-1P59990 96 aa3.88□□□□□ -1.79
RNU1-3-201ENST00000384782 SPINT4Q6UDR6 99 aa3.88□□□□□ -1.79
RNU1-3-201ENST00000384782 PLAC4Q8WY50 150 aa3.88□□□□□ -1.79
RNU1-3-201ENST00000384782 PRO0628Q9UI54 55 aa3.85□□□□□ -1.79
RNU1-3-201ENST00000384782 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
RNU1-3-201ENST00000384782 LCE2DQ5TA82 110 aaPredicted RBP3.84□□□□□ -1.79
RNU1-3-201ENST00000384782 LCE2BO14633 110 aa3.82□□□□□ -1.8
RNU1-3-201ENST00000384782 CAMK2N1Q7Z7J9 78 aa3.81□□□□□ -1.8
RNU1-3-201ENST00000384782 MT1BP07438 61 aa3.8□□□□□ -1.8
RNU1-3-201ENST00000384782 PMAIP1Q13794 54 aa3.76□□□□□ -1.81
RNU1-3-201ENST00000384782 PRO2289Q9P1D8 64 aa3.74□□□□□ -1.81
RNU1-3-201ENST00000384782 ROMO1P60602 79 aa3.71□□□□□ -1.82
RNU1-3-201ENST00000384782 KRTAP9-2Q9BYQ4 174 aa3.68□□□□□ -1.82
RNU1-3-201ENST00000384782 KRTAP10-5P60370 271 aa3.66□□□□□ -1.82
RNU1-3-201ENST00000384782 MT1XP80297 61 aa3.66□□□□□ -1.82
RNU1-3-201ENST00000384782 KRTAP19-6Q3LI70 58 aa3.66□□□□□ -1.82
RNU1-3-201ENST00000384782 C10orf95Q9H7T3 257 aa3.65□□□□□ -1.83
RNU1-3-201ENST00000384782 TNP1P09430 55 aa3.63□□□□□ -1.83
RNU1-3-201ENST00000384782 KRTAP25-1Q3LHN0 102 aa3.63□□□□□ -1.83
RNU1-3-201ENST00000384782 KTN1-AS1Q86SY8 53 aa3.58□□□□□ -1.84
RNU1-3-201ENST00000384782 USH2AO75445 5202 aa3.57□□□□□ -1.84
RNU1-3-201ENST00000384782 CRCT1Q9UGL9 99 aa3.56□□□□□ -1.84
RNU1-3-201ENST00000384782 KRTAP23-1A1A580 65 aa3.54□□□□□ -1.84
RNU1-3-201ENST00000384782 PP632Q6XCG6 107 aa3.52□□□□□ -1.85
RNU1-3-201ENST00000384782 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
RNU1-3-201ENST00000384782 KRTAP10-7P60409 375 aaPredicted RBP3.49□□□□□ -1.85
RNU1-3-201ENST00000384782 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
RNU1-3-201ENST00000384782 PRAC1Q96KF2 57 aa3.45□□□□□ -1.86
RNU1-3-201ENST00000384782 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
RNU1-3-201ENST00000384782 FSIP2Q5CZC0 6907 aa3.42□□□□□ -1.86
RNU1-3-201ENST00000384782 LCE3AQ5TA76 89 aa3.41□□□□□ -1.86
RNU1-3-201ENST00000384782 KRTAP8-1Q8IUC2 63 aa3.38□□□□□ -1.87
RNU1-3-201ENST00000384782 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
RNU1-3-201ENST00000384782 KRTAP4-8A0A0G2JLE6 195 aa3.36□□□□□ -1.87
RNU1-3-201ENST00000384782 KRTAP4-8Q9BYQ9 185 aa3.36□□□□□ -1.87
RNU1-3-201ENST00000384782 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
RNU1-3-201ENST00000384782 KRTAP19-5Q3LI72 72 aa3.3□□□□□ -1.88
RNU1-3-201ENST00000384782 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.28□□□□□ -1.88
RNU1-3-201ENST00000384782 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
RNU1-3-201ENST00000384782 KRTAP15-1Q3LI76 137 aa3.25□□□□□ -1.89
RNU1-3-201ENST00000384782 KRTAP19-4Q3LI73 84 aa3.24□□□□□ -1.89
RNU1-3-201ENST00000384782 MT1EP04732 61 aa3.23□□□□□ -1.89
RNU1-3-201ENST00000384782 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
RNU1-3-201ENST00000384782 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
RNU1-3-201ENST00000384782 SPRR2FQ96RM1 72 aa3.22□□□□□ -1.89
RNU1-3-201ENST00000384782 MACF1Q9UPN3 7388 aaKnown RBP3.2□□□□□ -1.9
RNU1-3-201ENST00000384782 KMT2DO14686 5537 aa3.16□□□□□ -1.9
RNU1-3-201ENST00000384782 MT1LQ93083 61 aa3.15□□□□□ -1.91
RNU1-3-201ENST00000384782 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
RNU1-3-201ENST00000384782 KRTAP19-3Q7Z4W3 81 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 157 ms