RNA–Protein interactions for RNA: ENST00000383721.8

NEK4-202, Transcript of NIMA related kinase 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK4, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-202ENST00000383721 C20orf166-AS1Q96NR2 134 aa7.51□□□□□ -1.21
NEK4-202ENST00000383721 MT1HL1P0DM35 61 aa7.48□□□□□ -1.21
NEK4-202ENST00000383721 KRTAP10-8P60410 259 aa7.46□□□□□ -1.21
NEK4-202ENST00000383721 DMBT1Q9UGM3 2413 aaPredicted RBP7.45□□□□□ -1.22
NEK4-202ENST00000383721 KRTAP3-1Q9BYR8 98 aa7.43□□□□□ -1.22
NEK4-202ENST00000383721 J3QL48 77 aa7.4□□□□□ -1.22
NEK4-202ENST00000383721 ADM2Q7Z4H4 148 aa7.39□□□□□ -1.23
NEK4-202ENST00000383721 PRAC1Q96KF2 57 aa7.39□□□□□ -1.23
NEK4-202ENST00000383721 HERC1Q15751 4861 aa7.37□□□□□ -1.23
NEK4-202ENST00000383721 H0YAA0 97 aa7.3□□□□□ -1.24
NEK4-202ENST00000383721 COX6B2Q6YFQ2 88 aa7.27□□□□□ -1.25
NEK4-202ENST00000383721 A0A1B0GU33 70 aa7.25□□□□□ -1.25
NEK4-202ENST00000383721 H1FX-AS1Q4G0G2 97 aa7.23□□□□□ -1.25
NEK4-202ENST00000383721 CSAG1Q6PB30 78 aa7.16□□□□□ -1.26
NEK4-202ENST00000383721 LPAP08519 4548 aa7.15□□□□□ -1.26
NEK4-202ENST00000383721 HMCN2Q8NDA2 5059 aa7.15□□□□□ -1.27
NEK4-202ENST00000383721 RPL37P61927 97 aaKnown RBP7.14□□□□□ -1.27
NEK4-202ENST00000383721 LINC01554Q52M75 96 aa7.13□□□□□ -1.27
NEK4-202ENST00000383721 KRTAP3-3Q9BYR6 98 aa7.12□□□□□ -1.27
NEK4-202ENST00000383721 XP32Q5T750 250 aa7.11□□□□□ -1.27
NEK4-202ENST00000383721 LRP2P98164 4655 aa7.08□□□□□ -1.28
NEK4-202ENST00000383721 KRTAP10-6P60371 365 aaPredicted RBP7.06□□□□□ -1.28
NEK4-202ENST00000383721 KRTAP3-2Q9BYR7 98 aa7.01□□□□□ -1.29
NEK4-202ENST00000383721 S4R3F8 94 aa7.01□□□□□ -1.29
NEK4-202ENST00000383721 TPRXLQ17RH7 258 aa6.99□□□□□ -1.29
NEK4-202ENST00000383721 KRTAP13-4Q3LI77 160 aa6.99□□□□□ -1.29
NEK4-202ENST00000383721 K7ERS5 55 aa6.99□□□□□ -1.29
NEK4-202ENST00000383721 KRTAP25-1Q3LHN0 102 aa6.97□□□□□ -1.29
NEK4-202ENST00000383721 UBR4Q5T4S7 5183 aa6.93□□□□□ -1.3
NEK4-202ENST00000383721 P0C880 135 aa6.92□□□□□ -1.3
NEK4-202ENST00000383721 A0A0D9SG42 100 aa6.91□□□□□ -1.3
NEK4-202ENST00000383721 CRIPTQ9P021 101 aa6.88□□□□□ -1.31
NEK4-202ENST00000383721 ROMO1P60602 79 aa6.86□□□□□ -1.31
NEK4-202ENST00000383721 MUC2Q02817 5179 aa6.82□□□□□ -1.32
NEK4-202ENST00000383721 RNF213Q63HN8 5207 aa6.8□□□□□ -1.32
NEK4-202ENST00000383721 MUC17Q685J3 4493 aa6.78□□□□□ -1.32
NEK4-202ENST00000383721 KRTAP12-2P59991 146 aa6.75□□□□□ -1.33
NEK4-202ENST00000383721 SEC61BP60468 96 aaKnown RBP6.74□□□□□ -1.33
NEK4-202ENST00000383721 KRTAP4-1Q9BYQ7 146 aa6.73□□□□□ -1.33
NEK4-202ENST00000383721 KRTAP12-1P59990 96 aa6.7□□□□□ -1.34
NEK4-202ENST00000383721 SPINT4Q6UDR6 99 aa6.67□□□□□ -1.34
NEK4-202ENST00000383721 M0QZ58 72 aa6.66□□□□□ -1.34
NEK4-202ENST00000383721 C10orf95Q9H7T3 257 aa6.64□□□□□ -1.35
NEK4-202ENST00000383721 FAT4Q6V0I7 4981 aa6.55□□□□□ -1.36
NEK4-202ENST00000383721 R4GN34 69 aa6.5□□□□□ -1.37
NEK4-202ENST00000383721 KRTAP19-2Q3LHN2 52 aa6.5□□□□□ -1.37
NEK4-202ENST00000383721 H3BS24 57 aa6.48□□□□□ -1.37
NEK4-202ENST00000383721 LORP23490 312 aaPredicted RBP6.47□□□□□ -1.37
NEK4-202ENST00000383721 LCE2CQ5TA81 110 aa6.45□□□□□ -1.38
NEK4-202ENST00000383721 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
NEK4-202ENST00000383721 FLGP20930 4061 aaPredicted RBP6.34□□□□□ -1.39
NEK4-202ENST00000383721 MT1HP80294 61 aa6.33□□□□□ -1.4
NEK4-202ENST00000383721 LCE2AQ5TA79 106 aaPredicted RBP6.29□□□□□ -1.4
NEK4-202ENST00000383721 M0R2T5 61 aa6.22□□□□□ -1.41
NEK4-202ENST00000383721 NDUFAF8A1L188 74 aa6.19□□□□□ -1.42
NEK4-202ENST00000383721 CAMK2N1Q7Z7J9 78 aa6.16□□□□□ -1.42
NEK4-202ENST00000383721 PLAC4Q8WY50 150 aa6.08□□□□□ -1.44
NEK4-202ENST00000383721 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
NEK4-202ENST00000383721 KRTAP9-8Q9BYQ0 159 aa6.05□□□□□ -1.44
NEK4-202ENST00000383721 MT2AP02795 61 aa6.01□□□□□ -1.45
NEK4-202ENST00000383721 MT1FP04733 61 aa5.98□□□□□ -1.45
NEK4-202ENST00000383721 TNP1P09430 55 aa5.94□□□□□ -1.46
NEK4-202ENST00000383721 KRTAP10-10P60014 251 aa5.93□□□□□ -1.46
NEK4-202ENST00000383721 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
NEK4-202ENST00000383721 KRTAP19-1Q8IUB9 90 aa5.89□□□□□ -1.47
NEK4-202ENST00000383721 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
NEK4-202ENST00000383721 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.47
NEK4-202ENST00000383721 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
NEK4-202ENST00000383721 LCE2DQ5TA82 110 aaPredicted RBP5.77□□□□□ -1.49
NEK4-202ENST00000383721 FSIP2Q5CZC0 6907 aa5.77□□□□□ -1.49
NEK4-202ENST00000383721 LUZP6Q538Z0 58 aa5.77□□□□□ -1.49
NEK4-202ENST00000383721 LCE2BO14633 110 aa5.75□□□□□ -1.49
NEK4-202ENST00000383721 USH2AO75445 5202 aa5.71□□□□□ -1.5
NEK4-202ENST00000383721 SPRR5A0A1B0GTR4 108 aa5.69□□□□□ -1.5
NEK4-202ENST00000383721 LCE3AQ5TA76 89 aa5.65□□□□□ -1.5
NEK4-202ENST00000383721 KRTAP19-8Q3LI54 63 aa5.64□□□□□ -1.51
NEK4-202ENST00000383721 SSPOA2VEC9 5147 aa5.59□□□□□ -1.51
NEK4-202ENST00000383721 MT1BP07438 61 aa5.59□□□□□ -1.52
NEK4-202ENST00000383721 KRTAP10-5P60370 271 aa5.56□□□□□ -1.52
NEK4-202ENST00000383721 MT1XP80297 61 aa5.54□□□□□ -1.52
NEK4-202ENST00000383721 KRTAP8-1Q8IUC2 63 aa5.52□□□□□ -1.53
NEK4-202ENST00000383721 CRCT1Q9UGL9 99 aa5.51□□□□□ -1.53
NEK4-202ENST00000383721 A0A0A0MQY5 61 aa5.46□□□□□ -1.54
NEK4-202ENST00000383721 KRTAP9-6A0A140TA67 174 aa5.43□□□□□ -1.54
NEK4-202ENST00000383721 KRTAP10-12P60413 245 aa5.42□□□□□ -1.54
NEK4-202ENST00000383721 KRTAP19-6Q3LI70 58 aa5.42□□□□□ -1.54
NEK4-202ENST00000383721 KRTAP10-7P60409 375 aaPredicted RBP5.39□□□□□ -1.55
NEK4-202ENST00000383721 FCGBPQ9Y6R7 5405 aaPredicted RBP5.38□□□□□ -1.55
NEK4-202ENST00000383721 KRTAP12-3P60328 96 aa5.38□□□□□ -1.55
NEK4-202ENST00000383721 PRO2289Q9P1D8 64 aa5.29□□□□□ -1.56
NEK4-202ENST00000383721 MACF1Q9UPN3 7388 aaKnown RBP5.2□□□□□ -1.58
NEK4-202ENST00000383721 KRTAP19-5Q3LI72 72 aa5.16□□□□□ -1.58
NEK4-202ENST00000383721 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
NEK4-202ENST00000383721 KMT2DO14686 5537 aa5.12□□□□□ -1.59
NEK4-202ENST00000383721 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.59
NEK4-202ENST00000383721 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
NEK4-202ENST00000383721 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
NEK4-202ENST00000383721 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
NEK4-202ENST00000383721 INE1O15225 51 aa4.97□□□□□ -1.61
NEK4-202ENST00000383721 KRTAP19-7Q3SYF9 63 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms