RNA–Protein interactions for RNA: ENST00000381759.8

KDM4B-202, Transcript of lysine demethylase 4B, humanhuman

TSL 1 (best) BASIC

Gene KDM4B, Length 3,058 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-202ENST00000381759 SPTSSBQ8NFR3 76 aa9.46□□□□□ -0.9
KDM4B-202ENST00000381759 CDC42SE1Q9NRR8 79 aa9.45□□□□□ -0.9
KDM4B-202ENST00000381759 BIRC6Q9NR09 4857 aa9.45□□□□□ -0.9
KDM4B-202ENST00000381759 SEC61GP60059 68 aa9.39□□□□□ -0.91
KDM4B-202ENST00000381759 UQCR11O14957 56 aa9.33□□□□□ -0.92
KDM4B-202ENST00000381759 PMAIP1Q13794 54 aa9.32□□□□□ -0.92
KDM4B-202ENST00000381759 KRTAP3-3Q9BYR6 98 aa9.31□□□□□ -0.92
KDM4B-202ENST00000381759 MIR22HGQ0VDD5 57 aa9.3□□□□□ -0.92
KDM4B-202ENST00000381759 S4R3F8 94 aa9.28□□□□□ -0.92
KDM4B-202ENST00000381759 SPATA8Q6RVD6 105 aa9.26□□□□□ -0.93
KDM4B-202ENST00000381759 H1FX-AS1Q4G0G2 97 aa9.23□□□□□ -0.93
KDM4B-202ENST00000381759 PCLOQ9Y6V0 5065 aa9.23□□□□□ -0.93
KDM4B-202ENST00000381759 RBM12B-AS1Q9P1G2 102 aa9.2□□□□□ -0.94
KDM4B-202ENST00000381759 A0A1B0GU33 70 aa9.19□□□□□ -0.94
KDM4B-202ENST00000381759 SEC61BP60468 96 aaKnown RBP9.18□□□□□ -0.94
KDM4B-202ENST00000381759 HERC1Q15751 4861 aa9.17□□□□□ -0.94
KDM4B-202ENST00000381759 H0YAA0 97 aa9.15□□□□□ -0.94
KDM4B-202ENST00000381759 KRTAP4-1Q9BYQ7 146 aa9.15□□□□□ -0.95
KDM4B-202ENST00000381759 A6NN06 94 aa9.14□□□□□ -0.95
KDM4B-202ENST00000381759 MUC17Q685J3 4493 aa9.13□□□□□ -0.95
KDM4B-202ENST00000381759 MUC2Q02817 5179 aa9.1□□□□□ -0.95
KDM4B-202ENST00000381759 KRTAP10-6P60371 365 aaPredicted RBP9.09□□□□□ -0.95
KDM4B-202ENST00000381759 KRTAP3-2Q9BYR7 98 aa9.06□□□□□ -0.96
KDM4B-202ENST00000381759 P0C880 135 aa9.03□□□□□ -0.96
KDM4B-202ENST00000381759 CSAG1Q6PB30 78 aa9.01□□□□□ -0.97
KDM4B-202ENST00000381759 ADM2Q7Z4H4 148 aa8.99□□□□□ -0.97
KDM4B-202ENST00000381759 KRTAP13-4Q3LI77 160 aa8.97□□□□□ -0.97
KDM4B-202ENST00000381759 HMCN2Q8NDA2 5059 aa8.96□□□□□ -0.98
KDM4B-202ENST00000381759 KTN1-AS1Q86SY8 53 aa8.95□□□□□ -0.98
KDM4B-202ENST00000381759 A0A0D9SG42 100 aa8.91□□□□□ -0.98
KDM4B-202ENST00000381759 KRTAP19-2Q3LHN2 52 aa8.85□□□□□ -0.99
KDM4B-202ENST00000381759 PRAC1Q96KF2 57 aa8.8□□□□□ -1
KDM4B-202ENST00000381759 K7ERS5 55 aa8.73□□□□□ -1.01
KDM4B-202ENST00000381759 UBR4Q5T4S7 5183 aa8.68□□□□□ -1.02
KDM4B-202ENST00000381759 RNF213Q63HN8 5207 aa8.68□□□□□ -1.02
KDM4B-202ENST00000381759 FAT4Q6V0I7 4981 aa8.68□□□□□ -1.02
KDM4B-202ENST00000381759 LORP23490 312 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-202ENST00000381759 FLGP20930 4061 aaPredicted RBP8.66□□□□□ -1.02
KDM4B-202ENST00000381759 M0QZ58 72 aa8.64□□□□□ -1.03
KDM4B-202ENST00000381759 KRTAP12-2P59991 146 aa8.63□□□□□ -1.03
KDM4B-202ENST00000381759 LINC01554Q52M75 96 aa8.63□□□□□ -1.03
KDM4B-202ENST00000381759 SPINT4Q6UDR6 99 aa8.63□□□□□ -1.03
KDM4B-202ENST00000381759 R4GN34 69 aa8.62□□□□□ -1.03
KDM4B-202ENST00000381759 KRTAP12-1P59990 96 aa8.57□□□□□ -1.04
KDM4B-202ENST00000381759 LCE2CQ5TA81 110 aa8.52□□□□□ -1.04
KDM4B-202ENST00000381759 CRIPTQ9P021 101 aa8.52□□□□□ -1.04
KDM4B-202ENST00000381759 ROMO1P60602 79 aa8.48□□□□□ -1.05
KDM4B-202ENST00000381759 M0R2T5 61 aa8.38□□□□□ -1.07
KDM4B-202ENST00000381759 KRTAP25-1Q3LHN0 102 aa8.33□□□□□ -1.08
KDM4B-202ENST00000381759 MT1HP80294 61 aa8.33□□□□□ -1.08
KDM4B-202ENST00000381759 C10orf95Q9H7T3 257 aa8.26□□□□□ -1.09
KDM4B-202ENST00000381759 CAMK2N1Q7Z7J9 78 aa8.14□□□□□ -1.11
KDM4B-202ENST00000381759 MT2AP02795 61 aa8.09□□□□□ -1.11
KDM4B-202ENST00000381759 MT1FP04733 61 aa8.09□□□□□ -1.11
KDM4B-202ENST00000381759 KRTAP10-10P60014 251 aa8.09□□□□□ -1.11
KDM4B-202ENST00000381759 KRTAP9-8Q9BYQ0 159 aa8.07□□□□□ -1.12
KDM4B-202ENST00000381759 KRTAP19-1Q8IUB9 90 aa8.06□□□□□ -1.12
KDM4B-202ENST00000381759 SPRR2GQ9BYE4 73 aa8.03□□□□□ -1.12
KDM4B-202ENST00000381759 PLAC4Q8WY50 150 aa7.9□□□□□ -1.14
KDM4B-202ENST00000381759 KRTAP9-3Q9BYQ3 159 aa7.75□□□□□ -1.17
KDM4B-202ENST00000381759 KRTAP19-8Q3LI54 63 aa7.73□□□□□ -1.17
KDM4B-202ENST00000381759 TNP1P09430 55 aa7.72□□□□□ -1.17
KDM4B-202ENST00000381759 MT1BP07438 61 aa7.7□□□□□ -1.18
KDM4B-202ENST00000381759 LCE2AQ5TA79 106 aaPredicted RBP7.67□□□□□ -1.18
KDM4B-202ENST00000381759 PP632Q6XCG6 107 aa7.59□□□□□ -1.19
KDM4B-202ENST00000381759 USH2AO75445 5202 aa7.58□□□□□ -1.2
KDM4B-202ENST00000381759 KRTAP10-5P60370 271 aa7.55□□□□□ -1.2
KDM4B-202ENST00000381759 MT1XP80297 61 aa7.55□□□□□ -1.2
KDM4B-202ENST00000381759 LCE2BO14633 110 aa7.54□□□□□ -1.2
KDM4B-202ENST00000381759 KRTAP15-1Q3LI76 137 aa7.48□□□□□ -1.21
KDM4B-202ENST00000381759 LCE3AQ5TA76 89 aa7.42□□□□□ -1.22
KDM4B-202ENST00000381759 KRTAP23-1A1A580 65 aa7.41□□□□□ -1.22
KDM4B-202ENST00000381759 KRTAP10-7P60409 375 aaPredicted RBP7.34□□□□□ -1.23
KDM4B-202ENST00000381759 PRO2289Q9P1D8 64 aa7.31□□□□□ -1.24
KDM4B-202ENST00000381759 KRTAP10-12P60413 245 aa7.26□□□□□ -1.25
KDM4B-202ENST00000381759 FSIP2Q5CZC0 6907 aa7.22□□□□□ -1.25
KDM4B-202ENST00000381759 KMT2DO14686 5537 aa7.21□□□□□ -1.26
KDM4B-202ENST00000381759 NDUFAF8A1L188 74 aa7.19□□□□□ -1.26
KDM4B-202ENST00000381759 KRTAP8-1Q8IUC2 63 aa7.16□□□□□ -1.26
KDM4B-202ENST00000381759 SSPOA2VEC9 5147 aa7.08□□□□□ -1.28
KDM4B-202ENST00000381759 KRTAP12-3P60328 96 aa7.07□□□□□ -1.28
KDM4B-202ENST00000381759 KRTAP4-8A0A0G2JLE6 195 aa7.03□□□□□ -1.28
KDM4B-202ENST00000381759 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
KDM4B-202ENST00000381759 KRTAP19-5Q3LI72 72 aa6.95□□□□□ -1.3
KDM4B-202ENST00000381759 LUZP6Q538Z0 58 aa6.95□□□□□ -1.3
KDM4B-202ENST00000381759 SPRR5A0A1B0GTR4 108 aa6.92□□□□□ -1.3
KDM4B-202ENST00000381759 H3BS24 57 aa6.92□□□□□ -1.3
KDM4B-202ENST00000381759 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.31
KDM4B-202ENST00000381759 KRTAP19-7Q3SYF9 63 aa6.73□□□□□ -1.33
KDM4B-202ENST00000381759 LCE2DQ5TA82 110 aaPredicted RBP6.71□□□□□ -1.33
KDM4B-202ENST00000381759 FCGBPQ9Y6R7 5405 aaPredicted RBP6.71□□□□□ -1.33
KDM4B-202ENST00000381759 LCE3CQ5T5A8 94 aa6.61□□□□□ -1.35
KDM4B-202ENST00000381759 MT1EP04732 61 aa6.56□□□□□ -1.36
KDM4B-202ENST00000381759 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
KDM4B-202ENST00000381759 MUC12Q9UKN1 5478 aa6.5□□□□□ -1.37
KDM4B-202ENST00000381759 MT1LQ93083 61 aa6.49□□□□□ -1.37
KDM4B-202ENST00000381759 MACF1Q9UPN3 7388 aaKnown RBP6.44□□□□□ -1.38
KDM4B-202ENST00000381759 KRTAP9-2Q9BYQ4 174 aa6.42□□□□□ -1.38
KDM4B-202ENST00000381759 KRTAP9-6A8MVA2 160 aa6.39□□□□□ -1.39
KDM4B-202ENST00000381759 SYNE2Q8WXH0 6885 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms