RNA–Protein interactions for RNA: ENST00000381112.7

CCM2-202, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 1,881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-202ENST00000381112 S4R3F8 94 aa9.72□□□□□ -0.85
CCM2-202ENST00000381112 LCA10Q71F78 164 aa9.72□□□□□ -0.85
CCM2-202ENST00000381112 KRTAP3-3Q9BYR6 98 aa9.7□□□□□ -0.86
CCM2-202ENST00000381112 SPTSSBQ8NFR3 76 aa9.69□□□□□ -0.86
CCM2-202ENST00000381112 RNF213Q63HN8 5207 aa9.68□□□□□ -0.86
CCM2-202ENST00000381112 Q1T7F1 81 aa9.68□□□□□ -0.86
CCM2-202ENST00000381112 V9GYY9 64 aa9.63□□□□□ -0.87
CCM2-202ENST00000381112 LINC01558Q9Y6Z2 57 aa9.62□□□□□ -0.87
CCM2-202ENST00000381112 LCE2CQ5TA81 110 aa9.56□□□□□ -0.88
CCM2-202ENST00000381112 CSAG1Q6PB30 78 aa9.52□□□□□ -0.89
CCM2-202ENST00000381112 PSPHP1O15172 72 aa9.51□□□□□ -0.89
CCM2-202ENST00000381112 PRR15LQ9BU68 103 aa9.51□□□□□ -0.89
CCM2-202ENST00000381112 FLGP20930 4061 aaPredicted RBP9.51□□□□□ -0.89
CCM2-202ENST00000381112 A0A1B0GU69 56 aa9.47□□□□□ -0.89
CCM2-202ENST00000381112 Q5VV11 94 aa9.44□□□□□ -0.9
CCM2-202ENST00000381112 SEC61GP60059 68 aa9.42□□□□□ -0.9
CCM2-202ENST00000381112 FAT4Q6V0I7 4981 aa9.38□□□□□ -0.91
CCM2-202ENST00000381112 KRTAP3-2Q9BYR7 98 aa9.35□□□□□ -0.91
CCM2-202ENST00000381112 MT1HP80294 61 aa9.34□□□□□ -0.91
CCM2-202ENST00000381112 H0YAA0 97 aa9.32□□□□□ -0.92
CCM2-202ENST00000381112 KRTAP10-6P60371 365 aaPredicted RBP9.32□□□□□ -0.92
CCM2-202ENST00000381112 PRO0628Q9UI54 55 aa9.31□□□□□ -0.92
CCM2-202ENST00000381112 ADM2Q7Z4H4 148 aa9.3□□□□□ -0.92
CCM2-202ENST00000381112 P0C880 135 aa9.26□□□□□ -0.93
CCM2-202ENST00000381112 M0R2T5 61 aa9.23□□□□□ -0.93
CCM2-202ENST00000381112 A0A1B0GU33 70 aa9.21□□□□□ -0.93
CCM2-202ENST00000381112 A6NED7 52 aa9.21□□□□□ -0.94
CCM2-202ENST00000381112 UQCR11O14957 56 aa9.18□□□□□ -0.94
CCM2-202ENST00000381112 MIR22HGQ0VDD5 57 aa9.08□□□□□ -0.96
CCM2-202ENST00000381112 SPATA8Q6RVD6 105 aa9.06□□□□□ -0.96
CCM2-202ENST00000381112 BRK1Q8WUW1 75 aa9.06□□□□□ -0.96
CCM2-202ENST00000381112 KRTAP13-4Q3LI77 160 aa9.06□□□□□ -0.96
CCM2-202ENST00000381112 CDC42SE1Q9NRR8 79 aa9.04□□□□□ -0.96
CCM2-202ENST00000381112 LORP23490 312 aaPredicted RBP9.04□□□□□ -0.96
CCM2-202ENST00000381112 A8MU10 97 aa9.02□□□□□ -0.96
CCM2-202ENST00000381112 LCE2AQ5TA79 106 aaPredicted RBP9.02□□□□□ -0.96
CCM2-202ENST00000381112 KRTAP9-8Q9BYQ0 159 aa9.01□□□□□ -0.97
CCM2-202ENST00000381112 M0QZ58 72 aa9□□□□□ -0.97
CCM2-202ENST00000381112 MT2AP02795 61 aa8.98□□□□□ -0.97
CCM2-202ENST00000381112 R4GN34 69 aa8.96□□□□□ -0.97
CCM2-202ENST00000381112 MT1FP04733 61 aa8.92□□□□□ -0.98
CCM2-202ENST00000381112 CRIPTQ9P021 101 aa8.92□□□□□ -0.98
CCM2-202ENST00000381112 KRTAP10-10P60014 251 aa8.88□□□□□ -0.99
CCM2-202ENST00000381112 A0A0D9SG42 100 aa8.86□□□□□ -0.99
CCM2-202ENST00000381112 LINC01554Q52M75 96 aa8.79□□□□□ -1
CCM2-202ENST00000381112 SPRR2GQ9BYE4 73 aa8.77□□□□□ -1.01
CCM2-202ENST00000381112 KRTAP19-1Q8IUB9 90 aa8.76□□□□□ -1.01
CCM2-202ENST00000381112 PMAIP1Q13794 54 aa8.75□□□□□ -1.01
CCM2-202ENST00000381112 KRTAP12-1P59990 96 aa8.7□□□□□ -1.02
CCM2-202ENST00000381112 KRTAP12-2P59991 146 aa8.68□□□□□ -1.02
CCM2-202ENST00000381112 KRTAP9-3Q9BYQ3 159 aa8.68□□□□□ -1.02
CCM2-202ENST00000381112 A6NN06 94 aa8.66□□□□□ -1.02
CCM2-202ENST00000381112 K7ERS5 55 aa8.65□□□□□ -1.02
CCM2-202ENST00000381112 SPINT4Q6UDR6 99 aa8.65□□□□□ -1.02
CCM2-202ENST00000381112 KRTAP19-8Q3LI54 63 aa8.55□□□□□ -1.04
CCM2-202ENST00000381112 KTN1-AS1Q86SY8 53 aa8.5□□□□□ -1.05
CCM2-202ENST00000381112 LCE2BO14633 110 aa8.45□□□□□ -1.06
CCM2-202ENST00000381112 MT1BP07438 61 aa8.44□□□□□ -1.06
CCM2-202ENST00000381112 PLAC4Q8WY50 150 aa8.43□□□□□ -1.06
CCM2-202ENST00000381112 CAMK2N1Q7Z7J9 78 aa8.38□□□□□ -1.07
CCM2-202ENST00000381112 ROMO1P60602 79 aa8.31□□□□□ -1.08
CCM2-202ENST00000381112 C10orf95Q9H7T3 257 aa8.25□□□□□ -1.09
CCM2-202ENST00000381112 USH2AO75445 5202 aa8.23□□□□□ -1.09
CCM2-202ENST00000381112 LCE2DQ5TA82 110 aaPredicted RBP8.2□□□□□ -1.1
CCM2-202ENST00000381112 MT1XP80297 61 aa8.15□□□□□ -1.1
CCM2-202ENST00000381112 KRTAP10-5P60370 271 aa8.15□□□□□ -1.11
CCM2-202ENST00000381112 PRAC1Q96KF2 57 aa8.05□□□□□ -1.12
CCM2-202ENST00000381112 PRO2289Q9P1D8 64 aa8.04□□□□□ -1.12
CCM2-202ENST00000381112 KRTAP25-1Q3LHN0 102 aa8□□□□□ -1.13
CCM2-202ENST00000381112 TNP1P09430 55 aa7.97□□□□□ -1.13
CCM2-202ENST00000381112 SSPOA2VEC9 5147 aa7.95□□□□□ -1.14
CCM2-202ENST00000381112 FSIP2Q5CZC0 6907 aa7.95□□□□□ -1.14
CCM2-202ENST00000381112 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
CCM2-202ENST00000381112 KRTAP9-2Q9BYQ4 174 aa7.89□□□□□ -1.15
CCM2-202ENST00000381112 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
CCM2-202ENST00000381112 KRTAP23-1A1A580 65 aa7.73□□□□□ -1.17
CCM2-202ENST00000381112 KRTAP10-12P60413 245 aa7.72□□□□□ -1.17
CCM2-202ENST00000381112 PP632Q6XCG6 107 aa7.71□□□□□ -1.18
CCM2-202ENST00000381112 LCE3AQ5TA76 89 aa7.66□□□□□ -1.18
CCM2-202ENST00000381112 FCGBPQ9Y6R7 5405 aaPredicted RBP7.65□□□□□ -1.19
CCM2-202ENST00000381112 CRCT1Q9UGL9 99 aa7.62□□□□□ -1.19
CCM2-202ENST00000381112 KRTAP4-8A0A0G2JLE6 195 aa7.53□□□□□ -1.2
CCM2-202ENST00000381112 KRTAP4-8Q9BYQ9 185 aa7.53□□□□□ -1.2
CCM2-202ENST00000381112 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.21
CCM2-202ENST00000381112 H3BS24 57 aa7.49□□□□□ -1.21
CCM2-202ENST00000381112 KMT2DO14686 5537 aa7.48□□□□□ -1.21
CCM2-202ENST00000381112 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
CCM2-202ENST00000381112 KRTAP19-5Q3LI72 72 aa7.35□□□□□ -1.23
CCM2-202ENST00000381112 MACF1Q9UPN3 7388 aaKnown RBP7.29□□□□□ -1.24
CCM2-202ENST00000381112 KRTAP9-6A0A140TA67 174 aa7.28□□□□□ -1.24
CCM2-202ENST00000381112 KRTAP19-7Q3SYF9 63 aa7.28□□□□□ -1.24
CCM2-202ENST00000381112 KRTAP15-1Q3LI76 137 aa7.2□□□□□ -1.26
CCM2-202ENST00000381112 MT1EP04732 61 aa7.15□□□□□ -1.26
CCM2-202ENST00000381112 SYNE2Q8WXH0 6885 aaKnown RBP7.09□□□□□ -1.27
CCM2-202ENST00000381112 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.05□□□□□ -1.28
CCM2-202ENST00000381112 SPRR2FQ96RM1 72 aa7.03□□□□□ -1.28
CCM2-202ENST00000381112 MT1LQ93083 61 aa7□□□□□ -1.29
CCM2-202ENST00000381112 KRTAP5-9P26371 169 aa6.99□□□□□ -1.29
CCM2-202ENST00000381112 MUC12Q9UKN1 5478 aa6.93□□□□□ -1.3
CCM2-202ENST00000381112 KRTAP19-4Q3LI73 84 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms