RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 DNAH5Q8TE73 4624 aa2.25□□□□□ -2.05
BRCA2-201ENST00000380152 KRTAP1-4P0C5Y4 121 aa2.23□□□□□ -2.05
BRCA2-201ENST00000380152 KRTAP13-3Q3SY46 172 aa2.21□□□□□ -2.06
BRCA2-201ENST00000380152 ALMS1Q8TCU4 4167 aa2.21□□□□□ -2.06
BRCA2-201ENST00000380152 KMT2CQ8NEZ4 4911 aaKnown RBP2.2□□□□□ -2.06
BRCA2-201ENST00000380152 RYR3Q15413 4870 aa2.19□□□□□ -2.06
BRCA2-201ENST00000380152 TNP1P09430 55 aa2.19□□□□□ -2.06
BRCA2-201ENST00000380152 KRTAP10-8P60410 259 aa2.18□□□□□ -2.06
BRCA2-201ENST00000380152 XP32Q5T750 250 aa2.18□□□□□ -2.06
BRCA2-201ENST00000380152 P0C880 135 aa2.17□□□□□ -2.06
BRCA2-201ENST00000380152 KRTAP12-2P59991 146 aa2.15□□□□□ -2.06
BRCA2-201ENST00000380152 PKD1P98161 4303 aa2.15□□□□□ -2.07
BRCA2-201ENST00000380152 PKHD1P08F94 4074 aa2.14□□□□□ -2.07
BRCA2-201ENST00000380152 DYNC1H1Q14204 4646 aaKnown RBP2.13□□□□□ -2.07
BRCA2-201ENST00000380152 FAT3Q8TDW7 4589 aa2.13□□□□□ -2.07
BRCA2-201ENST00000380152 APOBP04114 4563 aaKnown RBP2.13□□□□□ -2.07
BRCA2-201ENST00000380152 PP632Q6XCG6 107 aa2.12□□□□□ -2.07
BRCA2-201ENST00000380152 FAT1Q14517 4588 aa2.12□□□□□ -2.07
BRCA2-201ENST00000380152 A0A1B0GVY2 172 aa2.12□□□□□ -2.07
BRCA2-201ENST00000380152 RYR2Q92736 4967 aa2.12□□□□□ -2.07
BRCA2-201ENST00000380152 KRTAP3-1Q9BYR8 98 aa2.11□□□□□ -2.07
BRCA2-201ENST00000380152 TPRXLQ17RH7 258 aa2.09□□□□□ -2.07
BRCA2-201ENST00000380152 KRTAP12-1P59990 96 aa2.09□□□□□ -2.08
BRCA2-201ENST00000380152 KRTAP13-4Q3LI77 160 aa2.07□□□□□ -2.08
BRCA2-201ENST00000380152 LPAP08519 4548 aa2.06□□□□□ -2.08
BRCA2-201ENST00000380152 PKHD1L1Q86WI1 4243 aa2.05□□□□□ -2.08
BRCA2-201ENST00000380152 MYCBP2O75592 4640 aa2.04□□□□□ -2.08
BRCA2-201ENST00000380152 RYR1P21817 5038 aa2.04□□□□□ -2.08
BRCA2-201ENST00000380152 KRTAP10-6P60371 365 aaPredicted RBP2.04□□□□□ -2.08
BRCA2-201ENST00000380152 KRTAP15-1Q3LI76 137 aa2.02□□□□□ -2.09
BRCA2-201ENST00000380152 EPPK1P58107 5090 aaKnown RBP2.02□□□□□ -2.09
BRCA2-201ENST00000380152 KRTAP10-10P60014 251 aa2□□□□□ -2.09
BRCA2-201ENST00000380152 KRTAP3-3Q9BYR6 98 aa1.99□□□□□ -2.09
BRCA2-201ENST00000380152 KRTAP21-3Q3LHN1 58 aa1.99□□□□□ -2.09
BRCA2-201ENST00000380152 HSPG2P98160 4391 aa1.98□□□□□ -2.09
BRCA2-201ENST00000380152 PRO2289Q9P1D8 64 aa1.97□□□□□ -2.09
BRCA2-201ENST00000380152 LRP1Q07954 4544 aaKnown RBP1.97□□□□□ -2.09
BRCA2-201ENST00000380152 KRTAP3-2Q9BYR7 98 aa1.95□□□□□ -2.1
BRCA2-201ENST00000380152 ABCA13Q86UQ4 5058 aa1.95□□□□□ -2.1
BRCA2-201ENST00000380152 TNXBP22105 4242 aa1.93□□□□□ -2.1
BRCA2-201ENST00000380152 KIAA1109Q2LD37 5005 aa1.93□□□□□ -2.1
BRCA2-201ENST00000380152 LRP2P98164 4655 aa1.88□□□□□ -2.11
BRCA2-201ENST00000380152 MUC17Q685J3 4493 aa1.87□□□□□ -2.11
BRCA2-201ENST00000380152 HERC2O95714 4834 aa1.87□□□□□ -2.11
BRCA2-201ENST00000380152 BIRC6Q9NR09 4857 aa1.87□□□□□ -2.11
BRCA2-201ENST00000380152 FAT4Q6V0I7 4981 aa1.87□□□□□ -2.11
BRCA2-201ENST00000380152 HMCN2Q8NDA2 5059 aa1.85□□□□□ -2.11
BRCA2-201ENST00000380152 KRTAP10-4P60372 401 aaPredicted RBP1.85□□□□□ -2.11
BRCA2-201ENST00000380152 LORP23490 312 aaPredicted RBP1.85□□□□□ -2.11
BRCA2-201ENST00000380152 INE1O15225 51 aa1.85□□□□□ -2.11
BRCA2-201ENST00000380152 MT1HL1P0DM35 61 aa1.85□□□□□ -2.11
BRCA2-201ENST00000380152 PCLOQ9Y6V0 5065 aa1.83□□□□□ -2.12
BRCA2-201ENST00000380152 HERC1Q15751 4861 aa1.83□□□□□ -2.12
BRCA2-201ENST00000380152 MUC2Q02817 5179 aa1.83□□□□□ -2.12
BRCA2-201ENST00000380152 LCE3AQ5TA76 89 aa1.81□□□□□ -2.12
BRCA2-201ENST00000380152 KRTAP10-12P60413 245 aa1.8□□□□□ -2.12
BRCA2-201ENST00000380152 KRTAP4-5Q9BYR2 181 aa1.8□□□□□ -2.12
BRCA2-201ENST00000380152 KRTAP12-3P60328 96 aa1.77□□□□□ -2.13
BRCA2-201ENST00000380152 FLGP20930 4061 aaPredicted RBP1.76□□□□□ -2.13
BRCA2-201ENST00000380152 CRCT1Q9UGL9 99 aa1.76□□□□□ -2.13
BRCA2-201ENST00000380152 KRTAP23-1A1A580 65 aa1.76□□□□□ -2.13
BRCA2-201ENST00000380152 KRTAP17-1Q9BYP8 105 aa1.72□□□□□ -2.13
BRCA2-201ENST00000380152 KRTAP4-1Q9BYQ7 146 aa1.7□□□□□ -2.14
BRCA2-201ENST00000380152 UBR4Q5T4S7 5183 aa1.68□□□□□ -2.14
BRCA2-201ENST00000380152 SPRR2GQ9BYE4 73 aa1.66□□□□□ -2.14
BRCA2-201ENST00000380152 KRTAP10-5P60370 271 aa1.64□□□□□ -2.15
BRCA2-201ENST00000380152 RNF213Q63HN8 5207 aa1.64□□□□□ -2.15
BRCA2-201ENST00000380152 KRTAP19-2Q3LHN2 52 aa1.64□□□□□ -2.15
BRCA2-201ENST00000380152 MT1HP80294 61 aa1.63□□□□□ -2.15
BRCA2-201ENST00000380152 LCE3CQ5T5A8 94 aa1.6□□□□□ -2.15
BRCA2-201ENST00000380152 SYNE2Q8WXH0 6885 aaKnown RBP1.59□□□□□ -2.15
BRCA2-201ENST00000380152 KRTAP19-5Q3LI72 72 aa1.58□□□□□ -2.16
BRCA2-201ENST00000380152 KRTAP8-1Q8IUC2 63 aa1.58□□□□□ -2.16
BRCA2-201ENST00000380152 MT2AP02795 61 aa1.58□□□□□ -2.16
BRCA2-201ENST00000380152 MT1FP04733 61 aa1.57□□□□□ -2.16
BRCA2-201ENST00000380152 KRTAP10-7P60409 375 aaPredicted RBP1.57□□□□□ -2.16
BRCA2-201ENST00000380152 KRTAP19-1Q8IUB9 90 aa1.56□□□□□ -2.16
BRCA2-201ENST00000380152 USH2AO75445 5202 aa1.54□□□□□ -2.16
BRCA2-201ENST00000380152 SPRR5A0A1B0GTR4 108 aa1.53□□□□□ -2.17
BRCA2-201ENST00000380152 DSTQ03001 7570 aaKnown RBP1.51□□□□□ -2.17
BRCA2-201ENST00000380152 MT1XP80297 61 aa1.5□□□□□ -2.17
BRCA2-201ENST00000380152 KRTAP4-8A0A0G2JLE6 195 aa1.49□□□□□ -2.17
BRCA2-201ENST00000380152 KRTAP4-8Q9BYQ9 185 aa1.49□□□□□ -2.17
BRCA2-201ENST00000380152 KRTAP9-8Q9BYQ0 159 aa1.49□□□□□ -2.17
BRCA2-201ENST00000380152 KRTAP12-4P60329 112 aa1.48□□□□□ -2.17
BRCA2-201ENST00000380152 MACF1Q9UPN3 7388 aaKnown RBP1.47□□□□□ -2.17
BRCA2-201ENST00000380152 LCE2CQ5TA81 110 aa1.47□□□□□ -2.17
BRCA2-201ENST00000380152 SPRR2FQ96RM1 72 aa1.47□□□□□ -2.17
BRCA2-201ENST00000380152 LCE3BQ5TA77 95 aa1.46□□□□□ -2.18
BRCA2-201ENST00000380152 KRTAP19-8Q3LI54 63 aa1.46□□□□□ -2.18
BRCA2-201ENST00000380152 FSIP2Q5CZC0 6907 aa1.45□□□□□ -2.18
BRCA2-201ENST00000380152 MT1BP07438 61 aa1.45□□□□□ -2.18
BRCA2-201ENST00000380152 MT1GP13640 62 aa1.44□□□□□ -2.18
BRCA2-201ENST00000380152 KMT2DO14686 5537 aa1.44□□□□□ -2.18
BRCA2-201ENST00000380152 LCE2DQ5TA82 110 aaPredicted RBP1.43□□□□□ -2.18
BRCA2-201ENST00000380152 KRTAP4-7Q9BYR0 210 aa1.43□□□□□ -2.18
BRCA2-201ENST00000380152 SSPOA2VEC9 5147 aa1.41□□□□□ -2.18
BRCA2-201ENST00000380152 KRTAP19-4Q3LI73 84 aa1.4□□□□□ -2.19
BRCA2-201ENST00000380152 KRTAP9-3Q9BYQ3 159 aa1.39□□□□□ -2.19
BRCA2-201ENST00000380152 OBSCNQ5VST9 7968 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms