RNA–Protein interactions for RNA: ENST00000380026.7

CENPE-202, Transcript of centromere protein E, humanhuman

TSL 1 (best) BASIC

Gene CENPE, Length 8,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPE-202ENST00000380026 TPRXLQ17RH7 258 aa2.35□□□□□ -2.03
CENPE-202ENST00000380026 ROMO1P60602 79 aa2.35□□□□□ -2.03
CENPE-202ENST00000380026 DNAH1Q9P2D7 4330 aa2.34□□□□□ -2.03
CENPE-202ENST00000380026 DNAH17Q9UFH2 4485 aa2.34□□□□□ -2.03
CENPE-202ENST00000380026 FAT3Q8TDW7 4589 aa2.33□□□□□ -2.04
CENPE-202ENST00000380026 MT1HL1P0DM35 61 aa2.33□□□□□ -2.04
CENPE-202ENST00000380026 HECTD4Q9Y4D8 3996 aa2.32□□□□□ -2.04
CENPE-202ENST00000380026 KMT2CQ8NEZ4 4911 aaKnown RBP2.31□□□□□ -2.04
CENPE-202ENST00000380026 HERC2O95714 4834 aa2.31□□□□□ -2.04
CENPE-202ENST00000380026 KRTAP25-1Q3LHN0 102 aa2.3□□□□□ -2.04
CENPE-202ENST00000380026 LRP1Q07954 4544 aaKnown RBP2.29□□□□□ -2.04
CENPE-202ENST00000380026 APOBP04114 4563 aaKnown RBP2.29□□□□□ -2.04
CENPE-202ENST00000380026 SACSQ9NZJ4 4579 aa2.29□□□□□ -2.04
CENPE-202ENST00000380026 C10orf95Q9H7T3 257 aa2.28□□□□□ -2.04
CENPE-202ENST00000380026 KRTAP4-5Q9BYR2 181 aa2.28□□□□□ -2.04
CENPE-202ENST00000380026 KRTAP10-6P60371 365 aaPredicted RBP2.27□□□□□ -2.05
CENPE-202ENST00000380026 DNAH2Q9P225 4427 aa2.27□□□□□ -2.05
CENPE-202ENST00000380026 LRP2P98164 4655 aa2.26□□□□□ -2.05
CENPE-202ENST00000380026 FAT2Q9NYQ8 4349 aa2.26□□□□□ -2.05
CENPE-202ENST00000380026 RYR2Q92736 4967 aa2.26□□□□□ -2.05
CENPE-202ENST00000380026 EPPK1P58107 5090 aaKnown RBP2.26□□□□□ -2.05
CENPE-202ENST00000380026 KRTAP13-4Q3LI77 160 aa2.25□□□□□ -2.05
CENPE-202ENST00000380026 RNF213Q63HN8 5207 aa2.25□□□□□ -2.05
CENPE-202ENST00000380026 LUZP6Q538Z0 58 aa2.24□□□□□ -2.05
CENPE-202ENST00000380026 KRTAP3-3Q9BYR6 98 aa2.23□□□□□ -2.05
CENPE-202ENST00000380026 KRTAP3-2Q9BYR7 98 aa2.22□□□□□ -2.05
CENPE-202ENST00000380026 ABCA13Q86UQ4 5058 aa2.21□□□□□ -2.06
CENPE-202ENST00000380026 H3BS24 57 aa2.21□□□□□ -2.06
CENPE-202ENST00000380026 DNAH6Q9C0G6 4158 aa2.21□□□□□ -2.06
CENPE-202ENST00000380026 KRTAP12-2P59991 146 aa2.2□□□□□ -2.06
CENPE-202ENST00000380026 KRTAP12-1P59990 96 aa2.2□□□□□ -2.06
CENPE-202ENST00000380026 ALMS1Q8TCU4 4167 aa2.2□□□□□ -2.06
CENPE-202ENST00000380026 PLAC4Q8WY50 150 aa2.2□□□□□ -2.06
CENPE-202ENST00000380026 UBR4Q5T4S7 5183 aa2.19□□□□□ -2.06
CENPE-202ENST00000380026 OBSCNQ5VST9 7968 aa2.18□□□□□ -2.06
CENPE-202ENST00000380026 NDUFAF8A1L188 74 aa2.18□□□□□ -2.06
CENPE-202ENST00000380026 VPS13BQ7Z7G8 4022 aa2.18□□□□□ -2.06
CENPE-202ENST00000380026 TNP1P09430 55 aa2.17□□□□□ -2.06
CENPE-202ENST00000380026 KRTAP10-10P60014 251 aa2.17□□□□□ -2.06
CENPE-202ENST00000380026 SYNE1Q8NF91 8797 aaKnown RBP2.15□□□□□ -2.06
CENPE-202ENST00000380026 PKHD1P08F94 4074 aa2.15□□□□□ -2.06
CENPE-202ENST00000380026 LPAP08519 4548 aa2.14□□□□□ -2.07
CENPE-202ENST00000380026 BIRC6Q9NR09 4857 aa2.13□□□□□ -2.07
CENPE-202ENST00000380026 DNAH3Q8TD57 4116 aa2.13□□□□□ -2.07
CENPE-202ENST00000380026 HERC1Q15751 4861 aa2.12□□□□□ -2.07
CENPE-202ENST00000380026 PP632Q6XCG6 107 aa2.12□□□□□ -2.07
CENPE-202ENST00000380026 FSIP2Q5CZC0 6907 aa2.12□□□□□ -2.07
CENPE-202ENST00000380026 DYNC2H1Q8NCM8 4307 aaKnown RBP2.11□□□□□ -2.07
CENPE-202ENST00000380026 KRTAP4-1Q9BYQ7 146 aa2.11□□□□□ -2.07
CENPE-202ENST00000380026 LORP23490 312 aaPredicted RBP2.11□□□□□ -2.07
CENPE-202ENST00000380026 FAT4Q6V0I7 4981 aa2.1□□□□□ -2.07
CENPE-202ENST00000380026 MUC2Q02817 5179 aa2.1□□□□□ -2.07
CENPE-202ENST00000380026 A0A0A0MQY5 61 aa2.07□□□□□ -2.08
CENPE-202ENST00000380026 HSPG2P98160 4391 aa2.06□□□□□ -2.08
CENPE-202ENST00000380026 HMCN2Q8NDA2 5059 aa2□□□□□ -2.09
CENPE-202ENST00000380026 PRO2289Q9P1D8 64 aa2□□□□□ -2.09
CENPE-202ENST00000380026 PKD1P98161 4303 aa1.97□□□□□ -2.09
CENPE-202ENST00000380026 MUC17Q685J3 4493 aa1.97□□□□□ -2.09
CENPE-202ENST00000380026 KRTAP15-1Q3LI76 137 aa1.95□□□□□ -2.1
CENPE-202ENST00000380026 MT2AP02795 61 aa1.94□□□□□ -2.1
CENPE-202ENST00000380026 MT1HP80294 61 aa1.93□□□□□ -2.1
CENPE-202ENST00000380026 MT1FP04733 61 aa1.93□□□□□ -2.1
CENPE-202ENST00000380026 KRTAP19-1Q8IUB9 90 aa1.92□□□□□ -2.1
CENPE-202ENST00000380026 USH2AO75445 5202 aa1.92□□□□□ -2.1
CENPE-202ENST00000380026 DSTQ03001 7570 aaKnown RBP1.92□□□□□ -2.1
CENPE-202ENST00000380026 SPRR2GQ9BYE4 73 aa1.91□□□□□ -2.1
CENPE-202ENST00000380026 KRTAP10-12P60413 245 aa1.9□□□□□ -2.1
CENPE-202ENST00000380026 PKHD1L1Q86WI1 4243 aa1.9□□□□□ -2.1
CENPE-202ENST00000380026 KRTAP19-2Q3LHN2 52 aa1.89□□□□□ -2.11
CENPE-202ENST00000380026 LCE2CQ5TA81 110 aa1.89□□□□□ -2.11
CENPE-202ENST00000380026 LCE3AQ5TA76 89 aa1.89□□□□□ -2.11
CENPE-202ENST00000380026 KRTAP12-3P60328 96 aa1.88□□□□□ -2.11
CENPE-202ENST00000380026 FCGBPQ9Y6R7 5405 aaPredicted RBP1.87□□□□□ -2.11
CENPE-202ENST00000380026 KRTAP23-1A1A580 65 aa1.85□□□□□ -2.11
CENPE-202ENST00000380026 KRTAP9-8Q9BYQ0 159 aa1.84□□□□□ -2.12
CENPE-202ENST00000380026 KRTAP8-1Q8IUC2 63 aa1.83□□□□□ -2.12
CENPE-202ENST00000380026 KRTAP19-8Q3LI54 63 aa1.82□□□□□ -2.12
CENPE-202ENST00000380026 MT1BP07438 61 aa1.81□□□□□ -2.12
CENPE-202ENST00000380026 KMT2DO14686 5537 aa1.8□□□□□ -2.12
CENPE-202ENST00000380026 FLGP20930 4061 aaPredicted RBP1.79□□□□□ -2.12
CENPE-202ENST00000380026 MT1XP80297 61 aa1.78□□□□□ -2.12
CENPE-202ENST00000380026 TNXBP22105 4242 aa1.77□□□□□ -2.13
CENPE-202ENST00000380026 KRTAP10-7P60409 375 aaPredicted RBP1.76□□□□□ -2.13
CENPE-202ENST00000380026 KRTAP9-3Q9BYQ3 159 aa1.76□□□□□ -2.13
CENPE-202ENST00000380026 KRTAP10-5P60370 271 aa1.76□□□□□ -2.13
CENPE-202ENST00000380026 MACF1Q9UPN3 7388 aaKnown RBP1.74□□□□□ -2.13
CENPE-202ENST00000380026 CRCT1Q9UGL9 99 aa1.74□□□□□ -2.13
CENPE-202ENST00000380026 LCE2BO14633 110 aa1.73□□□□□ -2.13
CENPE-202ENST00000380026 SSPOA2VEC9 5147 aa1.73□□□□□ -2.13
CENPE-202ENST00000380026 KRTAP19-5Q3LI72 72 aa1.73□□□□□ -2.13
CENPE-202ENST00000380026 KRTAP4-8A0A0G2JLE6 195 aa1.73□□□□□ -2.13
CENPE-202ENST00000380026 KRTAP4-8Q9BYQ9 185 aa1.73□□□□□ -2.13
CENPE-202ENST00000380026 MUC5BQ9HC84 5762 aaPredicted RBP1.72□□□□□ -2.13
CENPE-202ENST00000380026 MUC12Q9UKN1 5478 aa1.72□□□□□ -2.13
CENPE-202ENST00000380026 SYNE2Q8WXH0 6885 aaKnown RBP1.71□□□□□ -2.14
CENPE-202ENST00000380026 HMCN1Q96RW7 5635 aa1.69□□□□□ -2.14
CENPE-202ENST00000380026 SPRR5A0A1B0GTR4 108 aa1.68□□□□□ -2.14
CENPE-202ENST00000380026 LCE2AQ5TA79 106 aaPredicted RBP1.68□□□□□ -2.14
CENPE-202ENST00000380026 MDN1Q9NU22 5596 aa1.67□□□□□ -2.14
CENPE-202ENST00000380026 LCE3CQ5T5A8 94 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms