RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 KRTAP10-1P60331 282 aa4.09□□□□□ -1.76
CDKL5-201ENST00000379989 PKHD1L1Q86WI1 4243 aa4.08□□□□□ -1.76
CDKL5-201ENST00000379989 DYNC1H1Q14204 4646 aaKnown RBP4.07□□□□□ -1.76
CDKL5-201ENST00000379989 A0A1B0GVY2 172 aa4.05□□□□□ -1.76
CDKL5-201ENST00000379989 COX6B2Q6YFQ2 88 aa4.04□□□□□ -1.76
CDKL5-201ENST00000379989 PKHD1P08F94 4074 aa4.04□□□□□ -1.76
CDKL5-201ENST00000379989 EPPK1P58107 5090 aaKnown RBP4.04□□□□□ -1.76
CDKL5-201ENST00000379989 KRTAP1-4P0C5Y4 121 aa4.04□□□□□ -1.76
CDKL5-201ENST00000379989 VPS13BQ7Z7G8 4022 aa4.02□□□□□ -1.77
CDKL5-201ENST00000379989 KRTAP13-2Q52LG2 175 aa4.01□□□□□ -1.77
CDKL5-201ENST00000379989 RPL37P61927 97 aaKnown RBP4.01□□□□□ -1.77
CDKL5-201ENST00000379989 SEC61BP60468 96 aaKnown RBP4□□□□□ -1.77
CDKL5-201ENST00000379989 DMBT1Q9UGM3 2413 aaPredicted RBP3.98□□□□□ -1.77
CDKL5-201ENST00000379989 APOBP04114 4563 aaKnown RBP3.98□□□□□ -1.77
CDKL5-201ENST00000379989 KRTAP3-1Q9BYR8 98 aa3.96□□□□□ -1.78
CDKL5-201ENST00000379989 KRTAP13-4Q3LI77 160 aa3.94□□□□□ -1.78
CDKL5-201ENST00000379989 HSPG2P98160 4391 aa3.93□□□□□ -1.78
CDKL5-201ENST00000379989 A0A0D9SG42 100 aa3.93□□□□□ -1.78
CDKL5-201ENST00000379989 KRTAP10-4P60372 401 aaPredicted RBP3.93□□□□□ -1.78
CDKL5-201ENST00000379989 LRP1BQ9NZR2 4599 aa3.92□□□□□ -1.78
CDKL5-201ENST00000379989 FAT3Q8TDW7 4589 aa3.92□□□□□ -1.78
CDKL5-201ENST00000379989 BIRC6Q9NR09 4857 aa3.92□□□□□ -1.78
CDKL5-201ENST00000379989 RYR1P21817 5038 aa3.88□□□□□ -1.79
CDKL5-201ENST00000379989 HERC2O95714 4834 aa3.88□□□□□ -1.79
CDKL5-201ENST00000379989 KRTAP10-6P60371 365 aaPredicted RBP3.88□□□□□ -1.79
CDKL5-201ENST00000379989 XP32Q5T750 250 aa3.88□□□□□ -1.79
CDKL5-201ENST00000379989 S4R3F8 94 aa3.86□□□□□ -1.79
CDKL5-201ENST00000379989 LOC100996750A0A140TA64 210 aa3.86□□□□□ -1.79
CDKL5-201ENST00000379989 KRTAP4-6Q9BYQ5 205 aa3.86□□□□□ -1.79
CDKL5-201ENST00000379989 KRTAP10-8P60410 259 aa3.85□□□□□ -1.79
CDKL5-201ENST00000379989 KRTAP12-2P59991 146 aa3.84□□□□□ -1.79
CDKL5-201ENST00000379989 KRTAP17-1Q9BYP8 105 aa3.82□□□□□ -1.8
CDKL5-201ENST00000379989 PLAC4Q8WY50 150 aa3.81□□□□□ -1.8
CDKL5-201ENST00000379989 SMR3BP02814 79 aaPredicted RBP3.8□□□□□ -1.8
CDKL5-201ENST00000379989 Q5VSD8 79 aa3.8□□□□□ -1.8
CDKL5-201ENST00000379989 ABCA13Q86UQ4 5058 aa3.8□□□□□ -1.8
CDKL5-201ENST00000379989 TNXBP22105 4242 aa3.77□□□□□ -1.81
CDKL5-201ENST00000379989 KRTAP12-1P59990 96 aa3.76□□□□□ -1.81
CDKL5-201ENST00000379989 KIAA1109Q2LD37 5005 aa3.76□□□□□ -1.81
CDKL5-201ENST00000379989 PCLOQ9Y6V0 5065 aa3.76□□□□□ -1.81
CDKL5-201ENST00000379989 FAT1Q14517 4588 aa3.74□□□□□ -1.81
CDKL5-201ENST00000379989 CAMK2N1Q7Z7J9 78 aa3.69□□□□□ -1.82
CDKL5-201ENST00000379989 C9orf92A6NGG3 77 aa3.68□□□□□ -1.82
CDKL5-201ENST00000379989 MT1HL1P0DM35 61 aa3.68□□□□□ -1.82
CDKL5-201ENST00000379989 MYCBP2O75592 4640 aa3.67□□□□□ -1.82
CDKL5-201ENST00000379989 LRP1Q07954 4544 aaKnown RBP3.63□□□□□ -1.83
CDKL5-201ENST00000379989 PRO2289Q9P1D8 64 aa3.61□□□□□ -1.83
CDKL5-201ENST00000379989 KRTAP4-5Q9BYR2 181 aa3.61□□□□□ -1.83
CDKL5-201ENST00000379989 KRTAP4-8Q9BYQ9 185 aa3.59□□□□□ -1.83
CDKL5-201ENST00000379989 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.58□□□□□ -1.84
CDKL5-201ENST00000379989 KRTAP9-2Q9BYQ4 174 aa3.58□□□□□ -1.84
CDKL5-201ENST00000379989 KRTAP9-6A0A140TA67 174 aa3.57□□□□□ -1.84
CDKL5-201ENST00000379989 M0QZ58 72 aa3.54□□□□□ -1.84
CDKL5-201ENST00000379989 LCE3BQ5TA77 95 aa3.53□□□□□ -1.84
CDKL5-201ENST00000379989 HMCN2Q8NDA2 5059 aa3.52□□□□□ -1.85
CDKL5-201ENST00000379989 MUC17Q685J3 4493 aa3.51□□□□□ -1.85
CDKL5-201ENST00000379989 HERC1Q15751 4861 aa3.5□□□□□ -1.85
CDKL5-201ENST00000379989 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
CDKL5-201ENST00000379989 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
CDKL5-201ENST00000379989 KRTAP19-1Q8IUB9 90 aa3.47□□□□□ -1.85
CDKL5-201ENST00000379989 R4GN34 69 aa3.47□□□□□ -1.85
CDKL5-201ENST00000379989 KRTAP4-12Q9BQ66 201 aa3.46□□□□□ -1.86
CDKL5-201ENST00000379989 LPAP08519 4548 aa3.43□□□□□ -1.86
CDKL5-201ENST00000379989 INE1O15225 51 aa3.42□□□□□ -1.86
CDKL5-201ENST00000379989 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
CDKL5-201ENST00000379989 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
CDKL5-201ENST00000379989 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
CDKL5-201ENST00000379989 KRTAP19-2Q3LHN2 52 aa3.29□□□□□ -1.88
CDKL5-201ENST00000379989 UBR4Q5T4S7 5183 aa3.29□□□□□ -1.88
CDKL5-201ENST00000379989 KRTAP4-8A0A0G2JLE6 195 aa3.29□□□□□ -1.88
CDKL5-201ENST00000379989 LRP2P98164 4655 aa3.26□□□□□ -1.89
CDKL5-201ENST00000379989 RNF213Q63HN8 5207 aa3.26□□□□□ -1.89
CDKL5-201ENST00000379989 KRTAP4-1Q9BYQ7 146 aa3.25□□□□□ -1.89
CDKL5-201ENST00000379989 FLGP20930 4061 aaPredicted RBP3.23□□□□□ -1.89
CDKL5-201ENST00000379989 KRTAP23-1A1A580 65 aa3.23□□□□□ -1.89
CDKL5-201ENST00000379989 LCE1DQ5T752 114 aa3.23□□□□□ -1.89
CDKL5-201ENST00000379989 KRTAP9-7A8MTY7 169 aa3.22□□□□□ -1.89
CDKL5-201ENST00000379989 TNP1P09430 55 aa3.19□□□□□ -1.9
CDKL5-201ENST00000379989 KRTAP19-4Q3LI73 84 aa3.18□□□□□ -1.9
CDKL5-201ENST00000379989 MUC2Q02817 5179 aa3.18□□□□□ -1.9
CDKL5-201ENST00000379989 KRTAP4-7Q9BYR0 210 aa3.15□□□□□ -1.9
CDKL5-201ENST00000379989 SPRR2GQ9BYE4 73 aa3.12□□□□□ -1.91
CDKL5-201ENST00000379989 KRTAP4-9Q9BYQ8 210 aa3.09□□□□□ -1.91
CDKL5-201ENST00000379989 FAT4Q6V0I7 4981 aa3.08□□□□□ -1.92
CDKL5-201ENST00000379989 MT1HP80294 61 aa3.07□□□□□ -1.92
CDKL5-201ENST00000379989 M0R2T5 61 aa3.05□□□□□ -1.92
CDKL5-201ENST00000379989 LCE5AQ5TCM9 118 aa3.04□□□□□ -1.92
CDKL5-201ENST00000379989 KRTAP9-3Q9BYQ3 159 aa3.04□□□□□ -1.92
CDKL5-201ENST00000379989 KRTAP4-2Q9BYR5 136 aa3.03□□□□□ -1.92
CDKL5-201ENST00000379989 KRTAP19-8Q3LI54 63 aa3.03□□□□□ -1.92
CDKL5-201ENST00000379989 KRTAP4-11Q9BYQ6 195 aa3.02□□□□□ -1.93
CDKL5-201ENST00000379989 LCE3AQ5TA76 89 aa3□□□□□ -1.93
CDKL5-201ENST00000379989 MT2AP02795 61 aa2.99□□□□□ -1.93
CDKL5-201ENST00000379989 KRTAP10-10P60014 251 aa2.99□□□□□ -1.93
CDKL5-201ENST00000379989 KRTAP9-8Q9BYQ0 159 aa2.99□□□□□ -1.93
CDKL5-201ENST00000379989 MT1FP04733 61 aa2.94□□□□□ -1.94
CDKL5-201ENST00000379989 KRTAP10-12P60413 245 aa2.93□□□□□ -1.94
CDKL5-201ENST00000379989 KRTAP8-1Q8IUC2 63 aa2.91□□□□□ -1.94
CDKL5-201ENST00000379989 MT1BP07438 61 aa2.85□□□□□ -1.95
CDKL5-201ENST00000379989 KRTAP12-3P60328 96 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms