RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 CYSTM1Q9H1C7 97 aa8.16□□□□□ -1.1
PDLIM4-202ENST00000379018 H7BZZ5 65 aa8.15□□□□□ -1.1
PDLIM4-202ENST00000379018 ATP5EP56381 51 aaPredicted RBP8.15□□□□□ -1.1
PDLIM4-202ENST00000379018 C5orf47Q569G3 176 aa8.14□□□□□ -1.11
PDLIM4-202ENST00000379018 IGKV2D-30A0A075B6S6 120 aa8.12□□□□□ -1.11
PDLIM4-202ENST00000379018 H3BPC8 53 aa8.12□□□□□ -1.11
PDLIM4-202ENST00000379018 IGKV2-30P06310 120 aa8.12□□□□□ -1.11
PDLIM4-202ENST00000379018 MMP24-AS1A0A0U1RRL7 71 aa8.11□□□□□ -1.11
PDLIM4-202ENST00000379018 NDUFS5O43920 106 aa8.11□□□□□ -1.11
PDLIM4-202ENST00000379018 CASC2Q6XLA1 102 aa8.1□□□□□ -1.11
PDLIM4-202ENST00000379018 MT1BP07438 61 aa8.08□□□□□ -1.12
PDLIM4-202ENST00000379018 MRPL34Q9BQ48 92 aaKnown RBP8.08□□□□□ -1.12
PDLIM4-202ENST00000379018 Q5VV11 94 aa8.07□□□□□ -1.12
PDLIM4-202ENST00000379018 TP53AIP1Q9HCN2 124 aa8.07□□□□□ -1.12
PDLIM4-202ENST00000379018 hDV103S1A0JD37 113 aa8.04□□□□□ -1.12
PDLIM4-202ENST00000379018 SNURFQ9Y675 71 aa8.04□□□□□ -1.12
PDLIM4-202ENST00000379018 C7orf65Q6ZTY9 151 aa8.02□□□□□ -1.13
PDLIM4-202ENST00000379018 MP68P56378 58 aa8.01□□□□□ -1.13
PDLIM4-202ENST00000379018 C4orf26Q17RF5 130 aa7.99□□□□□ -1.13
PDLIM4-202ENST00000379018 SERP1Q9Y6X1 66 aa7.99□□□□□ -1.13
PDLIM4-202ENST00000379018 KRTAP10-5P60370 271 aa7.98□□□□□ -1.13
PDLIM4-202ENST00000379018 TRAV22A0A0B4J277 110 aa7.97□□□□□ -1.13
PDLIM4-202ENST00000379018 KRTAP5-9P26371 169 aa7.97□□□□□ -1.13
PDLIM4-202ENST00000379018 Q5W150 140 aa7.97□□□□□ -1.13
PDLIM4-202ENST00000379018 MDN1Q9NU22 5596 aa7.96□□□□□ -1.14
PDLIM4-202ENST00000379018 KRTAP19-8Q3LI54 63 aa7.95□□□□□ -1.14
PDLIM4-202ENST00000379018 KMT2DO14686 5537 aa7.95□□□□□ -1.14
PDLIM4-202ENST00000379018 H0Y9P7 68 aa7.94□□□□□ -1.14
PDLIM4-202ENST00000379018 SPANXA2-OT1Q8N9U9 137 aa7.94□□□□□ -1.14
PDLIM4-202ENST00000379018 CYP4F30PQ9H0H9 118 aa7.93□□□□□ -1.14
PDLIM4-202ENST00000379018 SPRR2GQ9BYE4 73 aa7.91□□□□□ -1.14
PDLIM4-202ENST00000379018 S4R3F8 94 aa7.9□□□□□ -1.14
PDLIM4-202ENST00000379018 LINC00208Q96KT6 92 aa7.87□□□□□ -1.15
PDLIM4-202ENST00000379018 CSAG1Q6PB30 78 aa7.86□□□□□ -1.15
PDLIM4-202ENST00000379018 KRTAP2-3P0C7H8 128 aa7.85□□□□□ -1.15
PDLIM4-202ENST00000379018 C1orf64Q8NEQ6 169 aa7.85□□□□□ -1.15
PDLIM4-202ENST00000379018 KRTAP2-4Q9BYR9 128 aa7.85□□□□□ -1.15
PDLIM4-202ENST00000379018 LOC101927531A0A1B0GV80 90 aa7.83□□□□□ -1.16
PDLIM4-202ENST00000379018 LCA10Q71F78 164 aa7.82□□□□□ -1.16
PDLIM4-202ENST00000379018 SMIM26A0A096LP01 95 aa7.81□□□□□ -1.16
PDLIM4-202ENST00000379018 KRTAP3-1Q9BYR8 98 aa7.8□□□□□ -1.16
PDLIM4-202ENST00000379018 SPRR2EP22531 72 aa7.75□□□□□ -1.17
PDLIM4-202ENST00000379018 SPRR2BP35325 72 aa7.75□□□□□ -1.17
PDLIM4-202ENST00000379018 SPRR2AP35326 72 aa7.75□□□□□ -1.17
PDLIM4-202ENST00000379018 SPRR2FQ96RM1 72 aa7.74□□□□□ -1.17
PDLIM4-202ENST00000379018 Q1T7F1 81 aa7.64□□□□□ -1.19
PDLIM4-202ENST00000379018 V9GYY9 64 aa7.62□□□□□ -1.19
PDLIM4-202ENST00000379018 KRTAP3-3Q9BYR6 98 aa7.61□□□□□ -1.19
PDLIM4-202ENST00000379018 CRIPTQ9P021 101 aa7.6□□□□□ -1.19
PDLIM4-202ENST00000379018 DMAC1Q96GE9 116 aa7.58□□□□□ -1.2
PDLIM4-202ENST00000379018 KRTAP2-2Q9BYT5 123 aa7.57□□□□□ -1.2
PDLIM4-202ENST00000379018 KRTAP2-1Q9BYU5 128 aa7.57□□□□□ -1.2
PDLIM4-202ENST00000379018 COA5Q86WW8 74 aa7.56□□□□□ -1.2
PDLIM4-202ENST00000379018 KRTAP8-1Q8IUC2 63 aa7.55□□□□□ -1.2
PDLIM4-202ENST00000379018 ACYP2P14621 99 aa7.52□□□□□ -1.21
PDLIM4-202ENST00000379018 LCE1AQ5T7P2 110 aa7.51□□□□□ -1.21
PDLIM4-202ENST00000379018 PRO2289Q9P1D8 64 aa7.51□□□□□ -1.21
PDLIM4-202ENST00000379018 A8MUN3 132 aa7.49□□□□□ -1.21
PDLIM4-202ENST00000379018 SPRR2DP22532 72 aa7.49□□□□□ -1.21
PDLIM4-202ENST00000379018 MT1XP80297 61 aa7.47□□□□□ -1.21
PDLIM4-202ENST00000379018 LINC01558Q9Y6Z2 57 aa7.43□□□□□ -1.22
PDLIM4-202ENST00000379018 SVIPQ8NHG7 77 aa7.41□□□□□ -1.22
PDLIM4-202ENST00000379018 PLAC4Q8WY50 150 aa7.39□□□□□ -1.23
PDLIM4-202ENST00000379018 ADM2Q7Z4H4 148 aa7.37□□□□□ -1.23
PDLIM4-202ENST00000379018 KRTAP4-8A0A0G2JLE6 195 aa7.34□□□□□ -1.23
PDLIM4-202ENST00000379018 KRTAP4-8Q9BYQ9 185 aa7.34□□□□□ -1.23
PDLIM4-202ENST00000379018 H0YAA0 97 aa7.33□□□□□ -1.24
PDLIM4-202ENST00000379018 PRO0628Q9UI54 55 aa7.33□□□□□ -1.24
PDLIM4-202ENST00000379018 CHKB-CPT1BH3BT56 60 aa7.32□□□□□ -1.24
PDLIM4-202ENST00000379018 KRTAP12-2P59991 146 aa7.31□□□□□ -1.24
PDLIM4-202ENST00000379018 LCE3BQ5TA77 95 aa7.31□□□□□ -1.24
PDLIM4-202ENST00000379018 PSPHP1O15172 72 aa7.27□□□□□ -1.25
PDLIM4-202ENST00000379018 PRR15LQ9BU68 103 aa7.27□□□□□ -1.25
PDLIM4-202ENST00000379018 SPTSSBQ8NFR3 76 aa7.25□□□□□ -1.25
PDLIM4-202ENST00000379018 BRK1Q8WUW1 75 aa7.21□□□□□ -1.26
PDLIM4-202ENST00000379018 R4GN34 69 aa7.21□□□□□ -1.26
PDLIM4-202ENST00000379018 M0QZ58 72 aa7.16□□□□□ -1.26
PDLIM4-202ENST00000379018 KRTAP10-7P60409 375 aaPredicted RBP7.15□□□□□ -1.26
PDLIM4-202ENST00000379018 CDC42SE1Q9NRR8 79 aa7.15□□□□□ -1.26
PDLIM4-202ENST00000379018 A0A1B0GU69 56 aa7.14□□□□□ -1.27
PDLIM4-202ENST00000379018 LINC01554Q52M75 96 aa7.14□□□□□ -1.27
PDLIM4-202ENST00000379018 GPR98Q8WXG9 6306 aa7.14□□□□□ -1.27
PDLIM4-202ENST00000379018 P0C880 135 aa7.12□□□□□ -1.27
PDLIM4-202ENST00000379018 A6NED7 52 aa7.11□□□□□ -1.27
PDLIM4-202ENST00000379018 KRTAP10-12P60413 245 aa7.05□□□□□ -1.28
PDLIM4-202ENST00000379018 SEC61GP60059 68 aa7.04□□□□□ -1.28
PDLIM4-202ENST00000379018 UQCR11O14957 56 aa7.03□□□□□ -1.28
PDLIM4-202ENST00000379018 SPATA8Q6RVD6 105 aa7.02□□□□□ -1.29
PDLIM4-202ENST00000379018 KRTAP4-9Q9BYQ8 210 aa6.97□□□□□ -1.29
PDLIM4-202ENST00000379018 DSTQ03001 7570 aaKnown RBP6.94□□□□□ -1.3
PDLIM4-202ENST00000379018 MIR22HGQ0VDD5 57 aa6.93□□□□□ -1.3
PDLIM4-202ENST00000379018 A8MU10 97 aa6.92□□□□□ -1.3
PDLIM4-202ENST00000379018 KRTAP3-2Q9BYR7 98 aa6.92□□□□□ -1.3
PDLIM4-202ENST00000379018 A0A1B0GU33 70 aa6.85□□□□□ -1.31
PDLIM4-202ENST00000379018 PMAIP1Q13794 54 aa6.84□□□□□ -1.31
PDLIM4-202ENST00000379018 KTN1-AS1Q86SY8 53 aa6.75□□□□□ -1.33
PDLIM4-202ENST00000379018 LCE5AQ5TCM9 118 aa6.73□□□□□ -1.33
PDLIM4-202ENST00000379018 LCE1DQ5T752 114 aa6.7□□□□□ -1.34
PDLIM4-202ENST00000379018 KRTAP19-3Q7Z4W3 81 aa6.68□□□□□ -1.34
PDLIM4-202ENST00000379018 KRTAP19-7Q3SYF9 63 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms