RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 UQCR11O14957 56 aa10.47□□□□□ -0.73
SSU72-204ENST00000378726 ADM2Q7Z4H4 148 aa10.47□□□□□ -0.73
SSU72-204ENST00000378726 MIR22HGQ0VDD5 57 aa10.46□□□□□ -0.73
SSU72-204ENST00000378726 BIRC6Q9NR09 4857 aa10.42□□□□□ -0.74
SSU72-204ENST00000378726 LINC01554Q52M75 96 aa10.39□□□□□ -0.75
SSU72-204ENST00000378726 ABCA13Q86UQ4 5058 aa10.37□□□□□ -0.75
SSU72-204ENST00000378726 HERC2O95714 4834 aa10.35□□□□□ -0.75
SSU72-204ENST00000378726 XP32Q5T750 250 aa10.33□□□□□ -0.76
SSU72-204ENST00000378726 RPL37P61927 97 aaKnown RBP10.29□□□□□ -0.76
SSU72-204ENST00000378726 J3QL48 77 aa10.26□□□□□ -0.77
SSU72-204ENST00000378726 TPRXLQ17RH7 258 aa10.22□□□□□ -0.77
SSU72-204ENST00000378726 CSAG1Q6PB30 78 aa10.21□□□□□ -0.78
SSU72-204ENST00000378726 LPAP08519 4548 aa10.14□□□□□ -0.79
SSU72-204ENST00000378726 LRP2P98164 4655 aa10.13□□□□□ -0.79
SSU72-204ENST00000378726 KRTAP3-1Q9BYR8 98 aa10.11□□□□□ -0.79
SSU72-204ENST00000378726 H0YAA0 97 aa10.06□□□□□ -0.8
SSU72-204ENST00000378726 COX6B2Q6YFQ2 88 aa10.02□□□□□ -0.81
SSU72-204ENST00000378726 A0A1B0GU33 70 aa9.97□□□□□ -0.81
SSU72-204ENST00000378726 H3BS24 57 aa9.95□□□□□ -0.82
SSU72-204ENST00000378726 H1FX-AS1Q4G0G2 97 aa9.93□□□□□ -0.82
SSU72-204ENST00000378726 KRTAP25-1Q3LHN0 102 aa9.91□□□□□ -0.82
SSU72-204ENST00000378726 PCLOQ9Y6V0 5065 aa9.9□□□□□ -0.83
SSU72-204ENST00000378726 SEC61BP60468 96 aaKnown RBP9.87□□□□□ -0.83
SSU72-204ENST00000378726 HERC1Q15751 4861 aa9.82□□□□□ -0.84
SSU72-204ENST00000378726 ROMO1P60602 79 aa9.75□□□□□ -0.85
SSU72-204ENST00000378726 K7ERS5 55 aa9.74□□□□□ -0.85
SSU72-204ENST00000378726 KRTAP4-1Q9BYQ7 146 aa9.7□□□□□ -0.86
SSU72-204ENST00000378726 KRTAP3-3Q9BYR6 98 aa9.7□□□□□ -0.86
SSU72-204ENST00000378726 S4R3F8 94 aa9.7□□□□□ -0.86
SSU72-204ENST00000378726 MUC17Q685J3 4493 aa9.69□□□□□ -0.86
SSU72-204ENST00000378726 HMCN2Q8NDA2 5059 aa9.68□□□□□ -0.86
SSU72-204ENST00000378726 KRTAP10-6P60371 365 aaPredicted RBP9.64□□□□□ -0.87
SSU72-204ENST00000378726 CRIPTQ9P021 101 aa9.6□□□□□ -0.87
SSU72-204ENST00000378726 KRTAP13-4Q3LI77 160 aa9.58□□□□□ -0.88
SSU72-204ENST00000378726 KRTAP3-2Q9BYR7 98 aa9.56□□□□□ -0.88
SSU72-204ENST00000378726 A0A0D9SG42 100 aa9.51□□□□□ -0.89
SSU72-204ENST00000378726 MUC2Q02817 5179 aa9.5□□□□□ -0.89
SSU72-204ENST00000378726 P0C880 135 aa9.44□□□□□ -0.9
SSU72-204ENST00000378726 KRTAP19-2Q3LHN2 52 aa9.44□□□□□ -0.9
SSU72-204ENST00000378726 SPINT4Q6UDR6 99 aa9.31□□□□□ -0.92
SSU72-204ENST00000378726 KRTAP12-2P59991 146 aa9.27□□□□□ -0.93
SSU72-204ENST00000378726 FLGP20930 4061 aaPredicted RBP9.24□□□□□ -0.93
SSU72-204ENST00000378726 C10orf95Q9H7T3 257 aa9.23□□□□□ -0.93
SSU72-204ENST00000378726 UBR4Q5T4S7 5183 aa9.22□□□□□ -0.93
SSU72-204ENST00000378726 KRTAP12-1P59990 96 aa9.18□□□□□ -0.94
SSU72-204ENST00000378726 RNF213Q63HN8 5207 aa9.16□□□□□ -0.94
SSU72-204ENST00000378726 LCE2CQ5TA81 110 aa9.15□□□□□ -0.95
SSU72-204ENST00000378726 KRTAP15-1Q3LI76 137 aa9.12□□□□□ -0.95
SSU72-204ENST00000378726 FAT4Q6V0I7 4981 aa9.09□□□□□ -0.95
SSU72-204ENST00000378726 M0QZ58 72 aa9.06□□□□□ -0.96
SSU72-204ENST00000378726 NDUFAF8A1L188 74 aa9.03□□□□□ -0.96
SSU72-204ENST00000378726 LORP23490 312 aaPredicted RBP8.98□□□□□ -0.97
SSU72-204ENST00000378726 R4GN34 69 aa8.97□□□□□ -0.97
SSU72-204ENST00000378726 MT1HP80294 61 aa8.95□□□□□ -0.98
SSU72-204ENST00000378726 M0R2T5 61 aa8.93□□□□□ -0.98
SSU72-204ENST00000378726 KRTAP9-8Q9BYQ0 159 aa8.66□□□□□ -1.02
SSU72-204ENST00000378726 MT2AP02795 61 aa8.64□□□□□ -1.03
SSU72-204ENST00000378726 KRTAP10-10P60014 251 aa8.61□□□□□ -1.03
SSU72-204ENST00000378726 MT1FP04733 61 aa8.6□□□□□ -1.03
SSU72-204ENST00000378726 PLAC4Q8WY50 150 aa8.56□□□□□ -1.04
SSU72-204ENST00000378726 SPRR2GQ9BYE4 73 aa8.56□□□□□ -1.04
SSU72-204ENST00000378726 KRTAP19-1Q8IUB9 90 aa8.53□□□□□ -1.04
SSU72-204ENST00000378726 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
SSU72-204ENST00000378726 LCE2AQ5TA79 106 aaPredicted RBP8.43□□□□□ -1.06
SSU72-204ENST00000378726 PP632Q6XCG6 107 aa8.35□□□□□ -1.07
SSU72-204ENST00000378726 KRTAP9-3Q9BYQ3 159 aa8.33□□□□□ -1.08
SSU72-204ENST00000378726 KRTAP19-8Q3LI54 63 aa8.29□□□□□ -1.08
SSU72-204ENST00000378726 LUZP6Q538Z0 58 aa8.29□□□□□ -1.08
SSU72-204ENST00000378726 MT1BP07438 61 aa8.18□□□□□ -1.1
SSU72-204ENST00000378726 A0A0A0MQY5 61 aa8.13□□□□□ -1.11
SSU72-204ENST00000378726 TNP1P09430 55 aa8.1□□□□□ -1.11
SSU72-204ENST00000378726 LCE2BO14633 110 aa8.08□□□□□ -1.12
SSU72-204ENST00000378726 KRTAP23-1A1A580 65 aa7.99□□□□□ -1.13
SSU72-204ENST00000378726 KRTAP10-5P60370 271 aa7.97□□□□□ -1.13
SSU72-204ENST00000378726 MT1XP80297 61 aa7.97□□□□□ -1.13
SSU72-204ENST00000378726 SPRR5A0A1B0GTR4 108 aa7.9□□□□□ -1.14
SSU72-204ENST00000378726 USH2AO75445 5202 aa7.85□□□□□ -1.15
SSU72-204ENST00000378726 PRO2289Q9P1D8 64 aa7.83□□□□□ -1.16
SSU72-204ENST00000378726 LCE3AQ5TA76 89 aa7.71□□□□□ -1.18
SSU72-204ENST00000378726 KRTAP10-7P60409 375 aaPredicted RBP7.68□□□□□ -1.18
SSU72-204ENST00000378726 KRTAP10-12P60413 245 aa7.61□□□□□ -1.19
SSU72-204ENST00000378726 SSPOA2VEC9 5147 aa7.57□□□□□ -1.2
SSU72-204ENST00000378726 LCE2DQ5TA82 110 aaPredicted RBP7.55□□□□□ -1.2
SSU72-204ENST00000378726 FSIP2Q5CZC0 6907 aa7.54□□□□□ -1.2
SSU72-204ENST00000378726 KRTAP8-1Q8IUC2 63 aa7.5□□□□□ -1.21
SSU72-204ENST00000378726 KRTAP19-6Q3LI70 58 aa7.49□□□□□ -1.21
SSU72-204ENST00000378726 KMT2DO14686 5537 aa7.38□□□□□ -1.23
SSU72-204ENST00000378726 KRTAP4-8A0A0G2JLE6 195 aa7.37□□□□□ -1.23
SSU72-204ENST00000378726 KRTAP4-8Q9BYQ9 185 aa7.37□□□□□ -1.23
SSU72-204ENST00000378726 KRTAP12-3P60328 96 aa7.36□□□□□ -1.23
SSU72-204ENST00000378726 INE1O15225 51 aa7.31□□□□□ -1.24
SSU72-204ENST00000378726 KRTAP19-5Q3LI72 72 aa7.27□□□□□ -1.25
SSU72-204ENST00000378726 FCGBPQ9Y6R7 5405 aaPredicted RBP7.19□□□□□ -1.26
SSU72-204ENST00000378726 KRTAP9-2Q9BYQ4 174 aa7.19□□□□□ -1.26
SSU72-204ENST00000378726 KRTAP19-7Q3SYF9 63 aa7.11□□□□□ -1.27
SSU72-204ENST00000378726 CRCT1Q9UGL9 99 aa6.97□□□□□ -1.29
SSU72-204ENST00000378726 MT1EP04732 61 aa6.96□□□□□ -1.3
SSU72-204ENST00000378726 MACF1Q9UPN3 7388 aaKnown RBP6.9□□□□□ -1.31
SSU72-204ENST00000378726 LCE3CQ5T5A8 94 aa6.89□□□□□ -1.31
SSU72-204ENST00000378726 MT1LQ93083 61 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms