RNA–Protein interactions for RNA: ENST00000378402.9

PKHD1L1-201, Transcript of PKHD1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKHD1L1, Length 13,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1L1-201ENST00000378402 SMR3BP02814 79 aaPredicted RBP1.8□□□□□ -2.12
PKHD1L1-201ENST00000378402 HERC2O95714 4834 aa1.79□□□□□ -2.12
PKHD1L1-201ENST00000378402 TGP01266 2768 aa1.79□□□□□ -2.12
PKHD1L1-201ENST00000378402 VWFP04275 2813 aa1.79□□□□□ -2.12
PKHD1L1-201ENST00000378402 KRTAP10-11P60412 298 aa1.79□□□□□ -2.12
PKHD1L1-201ENST00000378402 TPRXLQ17RH7 258 aa1.78□□□□□ -2.12
PKHD1L1-201ENST00000378402 LRP1Q07954 4544 aaKnown RBP1.78□□□□□ -2.12
PKHD1L1-201ENST00000378402 OBSCNQ5VST9 7968 aa1.77□□□□□ -2.13
PKHD1L1-201ENST00000378402 HERC1Q15751 4861 aa1.77□□□□□ -2.13
PKHD1L1-201ENST00000378402 RYR2Q92736 4967 aa1.77□□□□□ -2.13
PKHD1L1-201ENST00000378402 KRTAP7-1Q8IUC3 87 aa1.77□□□□□ -2.13
PKHD1L1-201ENST00000378402 DNAH3Q8TD57 4116 aa1.76□□□□□ -2.13
PKHD1L1-201ENST00000378402 C10orf95Q9H7T3 257 aa1.76□□□□□ -2.13
PKHD1L1-201ENST00000378402 CSMD3Q7Z407 3707 aa1.75□□□□□ -2.13
PKHD1L1-201ENST00000378402 STARD9Q9P2P6 4700 aa1.75□□□□□ -2.13
PKHD1L1-201ENST00000378402 BIRC6Q9NR09 4857 aa1.74□□□□□ -2.13
PKHD1L1-201ENST00000378402 KRTAP13-2Q52LG2 175 aa1.73□□□□□ -2.13
PKHD1L1-201ENST00000378402 ABCA13Q86UQ4 5058 aa1.73□□□□□ -2.13
PKHD1L1-201ENST00000378402 M0R2T5 61 aa1.72□□□□□ -2.13
PKHD1L1-201ENST00000378402 DSTQ03001 7570 aaKnown RBP1.72□□□□□ -2.13
PKHD1L1-201ENST00000378402 KRTAP12-1P59990 96 aa1.71□□□□□ -2.14
PKHD1L1-201ENST00000378402 COL7A1Q02388 2944 aa1.71□□□□□ -2.14
PKHD1L1-201ENST00000378402 PKHD1L1Q86WI1 4243 aa1.71□□□□□ -2.14
PKHD1L1-201ENST00000378402 DNAH6Q9C0G6 4158 aa1.71□□□□□ -2.14
PKHD1L1-201ENST00000378402 LPAP08519 4548 aa1.7□□□□□ -2.14
PKHD1L1-201ENST00000378402 MT3P25713 68 aa1.7□□□□□ -2.14
PKHD1L1-201ENST00000378402 FSIP2Q5CZC0 6907 aa1.7□□□□□ -2.14
PKHD1L1-201ENST00000378402 FBN3Q75N90 2809 aa1.7□□□□□ -2.14
PKHD1L1-201ENST00000378402 UBR4Q5T4S7 5183 aa1.69□□□□□ -2.14
PKHD1L1-201ENST00000378402 PCLOQ9Y6V0 5065 aa1.69□□□□□ -2.14
PKHD1L1-201ENST00000378402 KMT2AQ03164 3969 aa1.69□□□□□ -2.14
PKHD1L1-201ENST00000378402 LRP2P98164 4655 aa1.68□□□□□ -2.14
PKHD1L1-201ENST00000378402 PKHD1P08F94 4074 aa1.68□□□□□ -2.14
PKHD1L1-201ENST00000378402 ALMS1Q8TCU4 4167 aa1.68□□□□□ -2.14
PKHD1L1-201ENST00000378402 KRTAP10-6P60371 365 aaPredicted RBP1.67□□□□□ -2.14
PKHD1L1-201ENST00000378402 KRTAP1-5Q9BYS1 174 aa1.66□□□□□ -2.14
PKHD1L1-201ENST00000378402 KRTAP1-4P0C5Y4 121 aa1.66□□□□□ -2.14
PKHD1L1-201ENST00000378402 ANK2Q01484 3957 aa1.66□□□□□ -2.14
PKHD1L1-201ENST00000378402 FRAS1Q86XX4 4008 aa1.64□□□□□ -2.15
PKHD1L1-201ENST00000378402 PKD1P98161 4303 aa1.63□□□□□ -2.15
PKHD1L1-201ENST00000378402 KRTAP17-1Q9BYP8 105 aa1.62□□□□□ -2.15
PKHD1L1-201ENST00000378402 RNF213Q63HN8 5207 aa1.62□□□□□ -2.15
PKHD1L1-201ENST00000378402 SPRR5A0A1B0GTR4 108 aa1.61□□□□□ -2.15
PKHD1L1-201ENST00000378402 KRTAP4-5Q9BYR2 181 aa1.61□□□□□ -2.15
PKHD1L1-201ENST00000378402 MEGF8Q7Z7M0 2845 aa1.61□□□□□ -2.15
PKHD1L1-201ENST00000378402 KRTAP10-8P60410 259 aa1.61□□□□□ -2.15
PKHD1L1-201ENST00000378402 KRTAP10-2P60368 255 aa1.61□□□□□ -2.15
PKHD1L1-201ENST00000378402 DNAH7Q8WXX0 4024 aa1.6□□□□□ -2.15
PKHD1L1-201ENST00000378402 MACF1Q9UPN3 7388 aaKnown RBP1.59□□□□□ -2.15
PKHD1L1-201ENST00000378402 LYSTQ99698 3801 aa1.59□□□□□ -2.15
PKHD1L1-201ENST00000378402 KRTAP3-1Q9BYR8 98 aa1.59□□□□□ -2.15
PKHD1L1-201ENST00000378402 KRTAP10-1P60331 282 aa1.59□□□□□ -2.15
PKHD1L1-201ENST00000378402 VPS13BQ7Z7G8 4022 aa1.58□□□□□ -2.16
PKHD1L1-201ENST00000378402 KRTAP3-2Q9BYR7 98 aa1.57□□□□□ -2.16
PKHD1L1-201ENST00000378402 FAT4Q6V0I7 4981 aa1.57□□□□□ -2.16
PKHD1L1-201ENST00000378402 HMCN2Q8NDA2 5059 aa1.57□□□□□ -2.16
PKHD1L1-201ENST00000378402 MUC17Q685J3 4493 aa1.55□□□□□ -2.16
PKHD1L1-201ENST00000378402 A0A1B0GVY2 172 aa1.55□□□□□ -2.16
PKHD1L1-201ENST00000378402 KRTAP3-3Q9BYR6 98 aa1.53□□□□□ -2.16
PKHD1L1-201ENST00000378402 TNXBP22105 4242 aa1.53□□□□□ -2.17
PKHD1L1-201ENST00000378402 KRTAP8-1Q8IUC2 63 aa1.46□□□□□ -2.18
PKHD1L1-201ENST00000378402 SYNE2Q8WXH0 6885 aaKnown RBP1.46□□□□□ -2.18
PKHD1L1-201ENST00000378402 MUC2Q02817 5179 aa1.45□□□□□ -2.18
PKHD1L1-201ENST00000378402 FLGP20930 4061 aaPredicted RBP1.45□□□□□ -2.18
PKHD1L1-201ENST00000378402 HECTD4Q9Y4D8 3996 aa1.44□□□□□ -2.18
PKHD1L1-201ENST00000378402 KRTAP12-3P60328 96 aa1.43□□□□□ -2.18
PKHD1L1-201ENST00000378402 LORP23490 312 aaPredicted RBP1.43□□□□□ -2.18
PKHD1L1-201ENST00000378402 KRTAP10-12P60413 245 aa1.42□□□□□ -2.18
PKHD1L1-201ENST00000378402 KRTAP10-10P60014 251 aa1.41□□□□□ -2.18
PKHD1L1-201ENST00000378402 SPRR2GQ9BYE4 73 aa1.38□□□□□ -2.19
PKHD1L1-201ENST00000378402 USH2AO75445 5202 aa1.37□□□□□ -2.19
PKHD1L1-201ENST00000378402 MT1HL1P0DM35 61 aa1.33□□□□□ -2.2
PKHD1L1-201ENST00000378402 KRTAP4-1Q9BYQ7 146 aa1.32□□□□□ -2.2
PKHD1L1-201ENST00000378402 LCE3CQ5T5A8 94 aa1.32□□□□□ -2.2
PKHD1L1-201ENST00000378402 LCE2DQ5TA82 110 aaPredicted RBP1.32□□□□□ -2.2
PKHD1L1-201ENST00000378402 SYNE1Q8NF91 8797 aaKnown RBP1.32□□□□□ -2.2
PKHD1L1-201ENST00000378402 KMT2DO14686 5537 aa1.31□□□□□ -2.2
PKHD1L1-201ENST00000378402 LCE2CQ5TA81 110 aa1.3□□□□□ -2.2
PKHD1L1-201ENST00000378402 FCGBPQ9Y6R7 5405 aaPredicted RBP1.3□□□□□ -2.2
PKHD1L1-201ENST00000378402 LCE3AQ5TA76 89 aa1.3□□□□□ -2.2
PKHD1L1-201ENST00000378402 CRCT1Q9UGL9 99 aa1.29□□□□□ -2.2
PKHD1L1-201ENST00000378402 KRTAP10-4P60372 401 aaPredicted RBP1.29□□□□□ -2.2
PKHD1L1-201ENST00000378402 MUC12Q9UKN1 5478 aa1.27□□□□□ -2.21
PKHD1L1-201ENST00000378402 SSPOA2VEC9 5147 aa1.27□□□□□ -2.21
PKHD1L1-201ENST00000378402 LCE2BO14633 110 aa1.24□□□□□ -2.21
PKHD1L1-201ENST00000378402 LCE2AQ5TA79 106 aaPredicted RBP1.24□□□□□ -2.21
PKHD1L1-201ENST00000378402 KRTAP19-8Q3LI54 63 aa1.23□□□□□ -2.21
PKHD1L1-201ENST00000378402 KRTAP2-3P0C7H8 128 aa1.21□□□□□ -2.22
PKHD1L1-201ENST00000378402 KRTAP2-4Q9BYR9 128 aa1.21□□□□□ -2.22
PKHD1L1-201ENST00000378402 KRTAP2-1Q9BYU5 128 aa1.21□□□□□ -2.22
PKHD1L1-201ENST00000378402 KRTAP12-4P60329 112 aa1.2□□□□□ -2.22
PKHD1L1-201ENST00000378402 SPRR2AP35326 72 aa1.2□□□□□ -2.22
PKHD1L1-201ENST00000378402 MT1AP04731 61 aa1.19□□□□□ -2.22
PKHD1L1-201ENST00000378402 SPRR2BP35325 72 aa1.19□□□□□ -2.22
PKHD1L1-201ENST00000378402 MT1LQ93083 61 aa1.19□□□□□ -2.22
PKHD1L1-201ENST00000378402 MT1EP04732 61 aa1.19□□□□□ -2.22
PKHD1L1-201ENST00000378402 GPR98Q8WXG9 6306 aa1.18□□□□□ -2.22
PKHD1L1-201ENST00000378402 NEBP20929 6669 aa1.18□□□□□ -2.22
PKHD1L1-201ENST00000378402 KRTAP10-5P60370 271 aa1.18□□□□□ -2.22
PKHD1L1-201ENST00000378402 LCE3EQ5T5B0 92 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms