RNA–Protein interactions for RNA: ENST00000376745.8

PPP1CA-203, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP1CA, Length 1,476 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-203ENST00000376745 A8MUN3 132 aa15.54■□□□□ 0.08
PPP1CA-203ENST00000376745 CRCT1Q9UGL9 99 aa15.52■□□□□ 0.07
PPP1CA-203ENST00000376745 LCE2BO14633 110 aa15.44■□□□□ 0.06
PPP1CA-203ENST00000376745 USH2AO75445 5202 aa15.33■□□□□ 0.04
PPP1CA-203ENST00000376745 NDUFC1O43677 76 aa15.31■□□□□ 0.04
PPP1CA-203ENST00000376745 DMAC1Q96GE9 116 aa15.31■□□□□ 0.04
PPP1CA-203ENST00000376745 SERP2Q8N6R1 65 aa15.27■□□□□ 0.03
PPP1CA-203ENST00000376745 SNURFQ9Y675 71 aa15.19■□□□□ 0.02
PPP1CA-203ENST00000376745 C20orf197Q8N268 126 aa15.12■□□□□ 0.01
PPP1CA-203ENST00000376745 SSPOA2VEC9 5147 aa15.1■□□□□ 0.01
PPP1CA-203ENST00000376745 H0YAA0 97 aa15.09■□□□□ 0.01
PPP1CA-203ENST00000376745 KRTAP19-1Q8IUB9 90 aa15.09■□□□□ 0.01
PPP1CA-203ENST00000376745 ACYP2P14621 99 aa15.01□□□□□ -0.01
PPP1CA-203ENST00000376745 SPRR2GQ9BYE4 73 aa14.98□□□□□ -0.01
PPP1CA-203ENST00000376745 COX7CP15954 63 aa14.95□□□□□ -0.02
PPP1CA-203ENST00000376745 SPANXA2-OT1Q8N9U9 137 aa14.95□□□□□ -0.02
PPP1CA-203ENST00000376745 CRIPTQ9P021 101 aa14.9□□□□□ -0.02
PPP1CA-203ENST00000376745 ADM2Q7Z4H4 148 aa14.89□□□□□ -0.03
PPP1CA-203ENST00000376745 KRTAP19-6Q3LI70 58 aa14.81□□□□□ -0.04
PPP1CA-203ENST00000376745 KRTAP19-8Q3LI54 63 aa14.8□□□□□ -0.04
PPP1CA-203ENST00000376745 MT1BP07438 61 aa14.72□□□□□ -0.05
PPP1CA-203ENST00000376745 SPTSSBQ8NFR3 76 aa14.69□□□□□ -0.06
PPP1CA-203ENST00000376745 CHKB-CPT1BH3BT56 60 aa14.68□□□□□ -0.06
PPP1CA-203ENST00000376745 Q5VV11 94 aa14.68□□□□□ -0.06
PPP1CA-203ENST00000376745 ANAPC13Q9BS18 74 aa14.68□□□□□ -0.06
PPP1CA-203ENST00000376745 KRTAP3-2Q9BYR7 98 aa14.67□□□□□ -0.06
PPP1CA-203ENST00000376745 CYSTM1Q9H1C7 97 aa14.67□□□□□ -0.06
PPP1CA-203ENST00000376745 FCGBPQ9Y6R7 5405 aaPredicted RBP14.67□□□□□ -0.06
PPP1CA-203ENST00000376745 P0C880 135 aa14.65□□□□□ -0.06
PPP1CA-203ENST00000376745 H7BZZ5 65 aa14.62□□□□□ -0.07
PPP1CA-203ENST00000376745 COA5Q86WW8 74 aa14.47□□□□□ -0.09
PPP1CA-203ENST00000376745 R4GN34 69 aa14.46□□□□□ -0.09
PPP1CA-203ENST00000376745 KRTAP9-1A8MXZ3 250 aaPredicted RBP14.42□□□□□ -0.1
PPP1CA-203ENST00000376745 CCDC179H3BU77 68 aa14.4□□□□□ -0.1
PPP1CA-203ENST00000376745 M0QZ58 72 aa14.37□□□□□ -0.11
PPP1CA-203ENST00000376745 A6NN06 94 aa14.27□□□□□ -0.12
PPP1CA-203ENST00000376745 KRTAP10-5P60370 271 aa14.25□□□□□ -0.13
PPP1CA-203ENST00000376745 PLAC4Q8WY50 150 aa14.11□□□□□ -0.15
PPP1CA-203ENST00000376745 LINC01554Q52M75 96 aa14.1□□□□□ -0.15
PPP1CA-203ENST00000376745 MACF1Q9UPN3 7388 aaKnown RBP14.08□□□□□ -0.16
PPP1CA-203ENST00000376745 KRTAP9-7A8MTY7 169 aa14.06□□□□□ -0.16
PPP1CA-203ENST00000376745 ATP5EP56381 51 aaPredicted RBP14.02□□□□□ -0.16
PPP1CA-203ENST00000376745 SEC61GP60059 68 aa13.95□□□□□ -0.18
PPP1CA-203ENST00000376745 MT1XP80297 61 aa13.94□□□□□ -0.18
PPP1CA-203ENST00000376745 KRTAP13-4Q3LI77 160 aa13.93□□□□□ -0.18
PPP1CA-203ENST00000376745 SERP1Q9Y6X1 66 aa13.93□□□□□ -0.18
PPP1CA-203ENST00000376745 PRO2289Q9P1D8 64 aa13.89□□□□□ -0.19
PPP1CA-203ENST00000376745 TMEM258P61165 79 aa13.88□□□□□ -0.19
PPP1CA-203ENST00000376745 SYNE2Q8WXH0 6885 aaKnown RBP13.8□□□□□ -0.2
PPP1CA-203ENST00000376745 A0A1B0GU33 70 aa13.72□□□□□ -0.21
PPP1CA-203ENST00000376745 A0A1B0GU69 56 aa13.7□□□□□ -0.22
PPP1CA-203ENST00000376745 KRTAP6-3Q3LI67 103 aa13.67□□□□□ -0.22
PPP1CA-203ENST00000376745 SPATA8Q6RVD6 105 aa13.61□□□□□ -0.23
PPP1CA-203ENST00000376745 A0A0D9SG42 100 aa13.49□□□□□ -0.25
PPP1CA-203ENST00000376745 LINC01558Q9Y6Z2 57 aa13.49□□□□□ -0.25
PPP1CA-203ENST00000376745 KRTAP12-2P59991 146 aa13.48□□□□□ -0.25
PPP1CA-203ENST00000376745 PRR15LQ9BU68 103 aa13.43□□□□□ -0.26
PPP1CA-203ENST00000376745 CAMK2N1Q7Z7J9 78 aa13.36□□□□□ -0.27
PPP1CA-203ENST00000376745 KRTAP5-9P26371 169 aa13.32□□□□□ -0.28
PPP1CA-203ENST00000376745 SMIM26A0A096LP01 95 aa13.3□□□□□ -0.28
PPP1CA-203ENST00000376745 KRTAP12-1P59990 96 aa13.3□□□□□ -0.28
PPP1CA-203ENST00000376745 KRTAP10-7P60409 375 aaPredicted RBP13.3□□□□□ -0.28
PPP1CA-203ENST00000376745 KMT2DO14686 5537 aa13.28□□□□□ -0.28
PPP1CA-203ENST00000376745 SPINT4Q6UDR6 99 aa13.27□□□□□ -0.29
PPP1CA-203ENST00000376745 KRTAP10-12P60413 245 aa13.24□□□□□ -0.29
PPP1CA-203ENST00000376745 A8MU10 97 aa13.23□□□□□ -0.29
PPP1CA-203ENST00000376745 PCP4P48539 62 aa13.18□□□□□ -0.3
PPP1CA-203ENST00000376745 KRTAP4-8A0A0G2JLE6 195 aa13.15□□□□□ -0.3
PPP1CA-203ENST00000376745 KRTAP4-8Q9BYQ9 185 aa13.15□□□□□ -0.3
PPP1CA-203ENST00000376745 KRTAP8-1Q8IUC2 63 aa13.13□□□□□ -0.31
PPP1CA-203ENST00000376745 MUC12Q9UKN1 5478 aa13.07□□□□□ -0.32
PPP1CA-203ENST00000376745 UQCR11O14957 56 aa13.03□□□□□ -0.32
PPP1CA-203ENST00000376745 V9GYY9 64 aa13□□□□□ -0.33
PPP1CA-203ENST00000376745 Q1T7F1 81 aa12.99□□□□□ -0.33
PPP1CA-203ENST00000376745 SPRR2FQ96RM1 72 aa12.99□□□□□ -0.33
PPP1CA-203ENST00000376745 NEBP20929 6669 aa12.9□□□□□ -0.34
PPP1CA-203ENST00000376745 PSPHP1O15172 72 aa12.85□□□□□ -0.35
PPP1CA-203ENST00000376745 RPS28P62857 69 aaKnown RBP12.82□□□□□ -0.36
PPP1CA-203ENST00000376745 MIR22HGQ0VDD5 57 aa12.78□□□□□ -0.36
PPP1CA-203ENST00000376745 MDN1Q9NU22 5596 aa12.77□□□□□ -0.37
PPP1CA-203ENST00000376745 C10orf95Q9H7T3 257 aa12.68□□□□□ -0.38
PPP1CA-203ENST00000376745 SPRR2EP22531 72 aa12.65□□□□□ -0.38
PPP1CA-203ENST00000376745 SPRR2BP35325 72 aa12.65□□□□□ -0.38
PPP1CA-203ENST00000376745 SPRR2AP35326 72 aa12.65□□□□□ -0.38
PPP1CA-203ENST00000376745 LCE1AQ5T7P2 110 aa12.63□□□□□ -0.39
PPP1CA-203ENST00000376745 TNP1P09430 55 aa12.48□□□□□ -0.41
PPP1CA-203ENST00000376745 KRTAP19-7Q3SYF9 63 aa12.46□□□□□ -0.41
PPP1CA-203ENST00000376745 A6NED7 52 aa12.43□□□□□ -0.42
PPP1CA-203ENST00000376745 K7ERS5 55 aa12.39□□□□□ -0.43
PPP1CA-203ENST00000376745 KRTAP20-1Q3LI63 56 aa12.36□□□□□ -0.43
PPP1CA-203ENST00000376745 MT1EP04732 61 aa12.31□□□□□ -0.44
PPP1CA-203ENST00000376745 KRTAP19-5Q3LI72 72 aa12.26□□□□□ -0.45
PPP1CA-203ENST00000376745 LCE3AQ5TA76 89 aa12.25□□□□□ -0.45
PPP1CA-203ENST00000376745 SPRR2DP22532 72 aa12.22□□□□□ -0.45
PPP1CA-203ENST00000376745 KRTAP2-3P0C7H8 128 aa12.21□□□□□ -0.45
PPP1CA-203ENST00000376745 KRTAP2-4Q9BYR9 128 aa12.21□□□□□ -0.45
PPP1CA-203ENST00000376745 KRTAP19-3Q7Z4W3 81 aa12.08□□□□□ -0.47
PPP1CA-203ENST00000376745 KRTAP25-1Q3LHN0 102 aa12.08□□□□□ -0.48
PPP1CA-203ENST00000376745 LCE5AQ5TCM9 118 aa12.06□□□□□ -0.48
PPP1CA-203ENST00000376745 CDC42SE1Q9NRR8 79 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms