RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 ACYP2P14621 99 aa6.85□□□□□ -1.31
TRIM40-206ENST00000376724 DMAC1Q96GE9 116 aa6.85□□□□□ -1.31
TRIM40-206ENST00000376724 PRAC1Q96KF2 57 aa6.84□□□□□ -1.31
TRIM40-206ENST00000376724 LINC01554Q52M75 96 aa6.82□□□□□ -1.32
TRIM40-206ENST00000376724 TPRXLQ17RH7 258 aa6.81□□□□□ -1.32
TRIM40-206ENST00000376724 ADM2Q7Z4H4 148 aa6.79□□□□□ -1.32
TRIM40-206ENST00000376724 LPAP08519 4548 aa6.78□□□□□ -1.32
TRIM40-206ENST00000376724 H3BS24 57 aa6.77□□□□□ -1.32
TRIM40-206ENST00000376724 SPATA8Q6RVD6 105 aa6.76□□□□□ -1.33
TRIM40-206ENST00000376724 LRP2P98164 4655 aa6.73□□□□□ -1.33
TRIM40-206ENST00000376724 A0A1B0GU69 56 aa6.72□□□□□ -1.33
TRIM40-206ENST00000376724 KRTAP3-1Q9BYR8 98 aa6.71□□□□□ -1.33
TRIM40-206ENST00000376724 MIR22HGQ0VDD5 57 aa6.68□□□□□ -1.34
TRIM40-206ENST00000376724 COX6B2Q6YFQ2 88 aa6.68□□□□□ -1.34
TRIM40-206ENST00000376724 PCLOQ9Y6V0 5065 aa6.68□□□□□ -1.34
TRIM40-206ENST00000376724 UQCR11O14957 56 aa6.67□□□□□ -1.34
TRIM40-206ENST00000376724 CSAG1Q6PB30 78 aa6.62□□□□□ -1.35
TRIM40-206ENST00000376724 SEC61BP60468 96 aaKnown RBP6.59□□□□□ -1.35
TRIM40-206ENST00000376724 HERC1Q15751 4861 aa6.55□□□□□ -1.36
TRIM40-206ENST00000376724 KRTAP4-1Q9BYQ7 146 aa6.49□□□□□ -1.37
TRIM40-206ENST00000376724 H1FX-AS1Q4G0G2 97 aa6.49□□□□□ -1.37
TRIM40-206ENST00000376724 S4R3F8 94 aa6.49□□□□□ -1.37
TRIM40-206ENST00000376724 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.38
TRIM40-206ENST00000376724 KRTAP3-3Q9BYR6 98 aa6.45□□□□□ -1.38
TRIM40-206ENST00000376724 MUC17Q685J3 4493 aa6.45□□□□□ -1.38
TRIM40-206ENST00000376724 KRTAP25-1Q3LHN0 102 aa6.42□□□□□ -1.38
TRIM40-206ENST00000376724 ROMO1P60602 79 aa6.38□□□□□ -1.39
TRIM40-206ENST00000376724 MUC2Q02817 5179 aa6.36□□□□□ -1.39
TRIM40-206ENST00000376724 H0YAA0 97 aa6.33□□□□□ -1.4
TRIM40-206ENST00000376724 A0A1B0GU33 70 aa6.29□□□□□ -1.4
TRIM40-206ENST00000376724 KRTAP19-2Q3LHN2 52 aa6.28□□□□□ -1.4
TRIM40-206ENST00000376724 A0A0A0MQY5 61 aa6.26□□□□□ -1.41
TRIM40-206ENST00000376724 KRTAP10-6P60371 365 aaPredicted RBP6.26□□□□□ -1.41
TRIM40-206ENST00000376724 KRTAP3-2Q9BYR7 98 aa6.25□□□□□ -1.41
TRIM40-206ENST00000376724 P0C880 135 aa6.23□□□□□ -1.41
TRIM40-206ENST00000376724 UBR4Q5T4S7 5183 aa6.21□□□□□ -1.41
TRIM40-206ENST00000376724 K7ERS5 55 aa6.18□□□□□ -1.42
TRIM40-206ENST00000376724 RNF213Q63HN8 5207 aa6.16□□□□□ -1.42
TRIM40-206ENST00000376724 CRIPTQ9P021 101 aa6.15□□□□□ -1.43
TRIM40-206ENST00000376724 KRTAP13-4Q3LI77 160 aa6.14□□□□□ -1.43
TRIM40-206ENST00000376724 FLGP20930 4061 aaPredicted RBP6.11□□□□□ -1.43
TRIM40-206ENST00000376724 LCE2CQ5TA81 110 aa6.1□□□□□ -1.43
TRIM40-206ENST00000376724 A0A0D9SG42 100 aa6.09□□□□□ -1.43
TRIM40-206ENST00000376724 FAT4Q6V0I7 4981 aa6.08□□□□□ -1.44
TRIM40-206ENST00000376724 SPINT4Q6UDR6 99 aa6.03□□□□□ -1.44
TRIM40-206ENST00000376724 M0QZ58 72 aa6.01□□□□□ -1.45
TRIM40-206ENST00000376724 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
TRIM40-206ENST00000376724 M0R2T5 61 aa6.01□□□□□ -1.45
TRIM40-206ENST00000376724 R4GN34 69 aa6□□□□□ -1.45
TRIM40-206ENST00000376724 MT1HP80294 61 aa5.98□□□□□ -1.45
TRIM40-206ENST00000376724 KRTAP15-1Q3LI76 137 aa5.95□□□□□ -1.46
TRIM40-206ENST00000376724 NDUFAF8A1L188 74 aa5.92□□□□□ -1.46
TRIM40-206ENST00000376724 KRTAP12-2P59991 146 aa5.91□□□□□ -1.46
TRIM40-206ENST00000376724 KRTAP12-1P59990 96 aa5.89□□□□□ -1.47
TRIM40-206ENST00000376724 C10orf95Q9H7T3 257 aa5.87□□□□□ -1.47
TRIM40-206ENST00000376724 MT2AP02795 61 aa5.77□□□□□ -1.49
TRIM40-206ENST00000376724 KRTAP10-10P60014 251 aa5.77□□□□□ -1.49
TRIM40-206ENST00000376724 KRTAP9-8Q9BYQ0 159 aa5.77□□□□□ -1.49
TRIM40-206ENST00000376724 MT1FP04733 61 aa5.76□□□□□ -1.49
TRIM40-206ENST00000376724 LCE2DQ5TA82 110 aaPredicted RBP5.76□□□□□ -1.49
TRIM40-206ENST00000376724 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
TRIM40-206ENST00000376724 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
TRIM40-206ENST00000376724 CAMK2N1Q7Z7J9 78 aa5.65□□□□□ -1.5
TRIM40-206ENST00000376724 LCE2AQ5TA79 106 aaPredicted RBP5.62□□□□□ -1.51
TRIM40-206ENST00000376724 PLAC4Q8WY50 150 aa5.58□□□□□ -1.52
TRIM40-206ENST00000376724 KRTAP9-3Q9BYQ3 159 aa5.55□□□□□ -1.52
TRIM40-206ENST00000376724 LUZP6Q538Z0 58 aa5.51□□□□□ -1.53
TRIM40-206ENST00000376724 KRTAP19-8Q3LI54 63 aa5.5□□□□□ -1.53
TRIM40-206ENST00000376724 MT1BP07438 61 aa5.46□□□□□ -1.54
TRIM40-206ENST00000376724 LCE2BO14633 110 aa5.4□□□□□ -1.54
TRIM40-206ENST00000376724 TNP1P09430 55 aa5.36□□□□□ -1.55
TRIM40-206ENST00000376724 MT1XP80297 61 aa5.32□□□□□ -1.56
TRIM40-206ENST00000376724 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
TRIM40-206ENST00000376724 USH2AO75445 5202 aa5.29□□□□□ -1.56
TRIM40-206ENST00000376724 PP632Q6XCG6 107 aa5.28□□□□□ -1.56
TRIM40-206ENST00000376724 PRO2289Q9P1D8 64 aa5.23□□□□□ -1.57
TRIM40-206ENST00000376724 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.58
TRIM40-206ENST00000376724 KRTAP23-1A1A580 65 aa5.14□□□□□ -1.59
TRIM40-206ENST00000376724 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
TRIM40-206ENST00000376724 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
TRIM40-206ENST00000376724 FSIP2Q5CZC0 6907 aa5.1□□□□□ -1.59
TRIM40-206ENST00000376724 KRTAP10-12P60413 245 aa5.09□□□□□ -1.59
TRIM40-206ENST00000376724 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
TRIM40-206ENST00000376724 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
TRIM40-206ENST00000376724 KRTAP19-6Q3LI70 58 aa4.99□□□□□ -1.61
TRIM40-206ENST00000376724 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
TRIM40-206ENST00000376724 KMT2DO14686 5537 aa4.97□□□□□ -1.61
TRIM40-206ENST00000376724 KRTAP4-8A0A0G2JLE6 195 aa4.94□□□□□ -1.62
TRIM40-206ENST00000376724 KRTAP4-8Q9BYQ9 185 aa4.94□□□□□ -1.62
TRIM40-206ENST00000376724 KRTAP9-6A0A140TA67 174 aa4.91□□□□□ -1.62
TRIM40-206ENST00000376724 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
TRIM40-206ENST00000376724 CRCT1Q9UGL9 99 aa4.87□□□□□ -1.63
TRIM40-206ENST00000376724 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
TRIM40-206ENST00000376724 FCGBPQ9Y6R7 5405 aaPredicted RBP4.82□□□□□ -1.64
TRIM40-206ENST00000376724 INE1O15225 51 aa4.8□□□□□ -1.64
TRIM40-206ENST00000376724 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
TRIM40-206ENST00000376724 MACF1Q9UPN3 7388 aaKnown RBP4.65□□□□□ -1.67
TRIM40-206ENST00000376724 MT1EP04732 61 aa4.64□□□□□ -1.67
TRIM40-206ENST00000376724 LCE3CQ5T5A8 94 aa4.59□□□□□ -1.67
TRIM40-206ENST00000376724 MT1LQ93083 61 aa4.57□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms