RNA–Protein interactions for RNA: ENST00000376619.6

HDAC6-203, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,179 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-203ENST00000376619 M0R2T5 61 aa5.85□□□□□ -1.47
HDAC6-203ENST00000376619 RPS29P62273 56 aaKnown RBP5.85□□□□□ -1.47
HDAC6-203ENST00000376619 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
HDAC6-203ENST00000376619 A6NN06 94 aa5.84□□□□□ -1.47
HDAC6-203ENST00000376619 VPS13BQ7Z7G8 4022 aa5.84□□□□□ -1.48
HDAC6-203ENST00000376619 R4GN34 69 aa5.83□□□□□ -1.48
HDAC6-203ENST00000376619 LRP1Q07954 4544 aaKnown RBP5.82□□□□□ -1.48
HDAC6-203ENST00000376619 BIRC6Q9NR09 4857 aa5.81□□□□□ -1.48
HDAC6-203ENST00000376619 M0QZ58 72 aa5.81□□□□□ -1.48
HDAC6-203ENST00000376619 RYR1P21817 5038 aa5.8□□□□□ -1.48
HDAC6-203ENST00000376619 KRTAP10-8P60410 259 aa5.77□□□□□ -1.49
HDAC6-203ENST00000376619 SEC61BP60468 96 aaKnown RBP5.77□□□□□ -1.49
HDAC6-203ENST00000376619 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
HDAC6-203ENST00000376619 KRTAP3-1Q9BYR8 98 aa5.76□□□□□ -1.49
HDAC6-203ENST00000376619 HECTD4Q9Y4D8 3996 aa5.76□□□□□ -1.49
HDAC6-203ENST00000376619 H0YAA0 97 aa5.75□□□□□ -1.49
HDAC6-203ENST00000376619 KRTAP17-1Q9BYP8 105 aa5.75□□□□□ -1.49
HDAC6-203ENST00000376619 P0C880 135 aa5.74□□□□□ -1.49
HDAC6-203ENST00000376619 APOBP04114 4563 aaKnown RBP5.72□□□□□ -1.49
HDAC6-203ENST00000376619 HERC2O95714 4834 aa5.72□□□□□ -1.49
HDAC6-203ENST00000376619 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
HDAC6-203ENST00000376619 C10orf95Q9H7T3 257 aa5.67□□□□□ -1.5
HDAC6-203ENST00000376619 FAT2Q9NYQ8 4349 aa5.67□□□□□ -1.5
HDAC6-203ENST00000376619 ROMO1P60602 79 aa5.63□□□□□ -1.51
HDAC6-203ENST00000376619 MT1HL1P0DM35 61 aa5.62□□□□□ -1.51
HDAC6-203ENST00000376619 PKD1P98161 4303 aa5.59□□□□□ -1.51
HDAC6-203ENST00000376619 HSPG2P98160 4391 aa5.58□□□□□ -1.52
HDAC6-203ENST00000376619 ABCA13Q86UQ4 5058 aa5.57□□□□□ -1.52
HDAC6-203ENST00000376619 TPRXLQ17RH7 258 aa5.55□□□□□ -1.52
HDAC6-203ENST00000376619 LRP2P98164 4655 aa5.54□□□□□ -1.52
HDAC6-203ENST00000376619 KRTAP25-1Q3LHN0 102 aa5.52□□□□□ -1.53
HDAC6-203ENST00000376619 KRTAP13-4Q3LI77 160 aa5.52□□□□□ -1.53
HDAC6-203ENST00000376619 PCLOQ9Y6V0 5065 aa5.48□□□□□ -1.53
HDAC6-203ENST00000376619 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
HDAC6-203ENST00000376619 KRTAP10-6P60371 365 aaPredicted RBP5.44□□□□□ -1.54
HDAC6-203ENST00000376619 HERC1Q15751 4861 aa5.43□□□□□ -1.54
HDAC6-203ENST00000376619 KRTAP3-3Q9BYR6 98 aa5.42□□□□□ -1.54
HDAC6-203ENST00000376619 LPAP08519 4548 aa5.36□□□□□ -1.55
HDAC6-203ENST00000376619 KRTAP3-2Q9BYR7 98 aa5.33□□□□□ -1.56
HDAC6-203ENST00000376619 PLAC4Q8WY50 150 aa5.31□□□□□ -1.56
HDAC6-203ENST00000376619 MUC2Q02817 5179 aa5.31□□□□□ -1.56
HDAC6-203ENST00000376619 KRTAP12-1P59990 96 aa5.31□□□□□ -1.56
HDAC6-203ENST00000376619 LUZP6Q538Z0 58 aa5.3□□□□□ -1.56
HDAC6-203ENST00000376619 NDUFAF8A1L188 74 aa5.3□□□□□ -1.56
HDAC6-203ENST00000376619 KRTAP10-10P60014 251 aa5.29□□□□□ -1.56
HDAC6-203ENST00000376619 LORP23490 312 aaPredicted RBP5.27□□□□□ -1.57
HDAC6-203ENST00000376619 KRTAP4-1Q9BYQ7 146 aa5.24□□□□□ -1.57
HDAC6-203ENST00000376619 RNF213Q63HN8 5207 aa5.19□□□□□ -1.58
HDAC6-203ENST00000376619 UBR4Q5T4S7 5183 aa5.19□□□□□ -1.58
HDAC6-203ENST00000376619 TNP1P09430 55 aa5.15□□□□□ -1.58
HDAC6-203ENST00000376619 PKHD1L1Q86WI1 4243 aa5.13□□□□□ -1.59
HDAC6-203ENST00000376619 FAT4Q6V0I7 4981 aa5.08□□□□□ -1.6
HDAC6-203ENST00000376619 HMCN2Q8NDA2 5059 aa5.04□□□□□ -1.6
HDAC6-203ENST00000376619 TNXBP22105 4242 aa5.04□□□□□ -1.6
HDAC6-203ENST00000376619 FSIP2Q5CZC0 6907 aa5.02□□□□□ -1.61
HDAC6-203ENST00000376619 PP632Q6XCG6 107 aa4.85□□□□□ -1.63
HDAC6-203ENST00000376619 MT1HP80294 61 aa4.79□□□□□ -1.64
HDAC6-203ENST00000376619 KRTAP23-1A1A580 65 aa4.77□□□□□ -1.65
HDAC6-203ENST00000376619 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
HDAC6-203ENST00000376619 MT1FP04733 61 aa4.7□□□□□ -1.66
HDAC6-203ENST00000376619 PRO2289Q9P1D8 64 aa4.69□□□□□ -1.66
HDAC6-203ENST00000376619 MT2AP02795 61 aa4.68□□□□□ -1.66
HDAC6-203ENST00000376619 LCE3AQ5TA76 89 aa4.67□□□□□ -1.66
HDAC6-203ENST00000376619 LCE2CQ5TA81 110 aa4.67□□□□□ -1.66
HDAC6-203ENST00000376619 MUC17Q685J3 4493 aa4.64□□□□□ -1.67
HDAC6-203ENST00000376619 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
HDAC6-203ENST00000376619 USH2AO75445 5202 aa4.62□□□□□ -1.67
HDAC6-203ENST00000376619 KRTAP19-2Q3LHN2 52 aa4.6□□□□□ -1.67
HDAC6-203ENST00000376619 LCE2AQ5TA79 106 aaPredicted RBP4.59□□□□□ -1.67
HDAC6-203ENST00000376619 KRTAP10-12P60413 245 aa4.58□□□□□ -1.68
HDAC6-203ENST00000376619 KRTAP19-1Q8IUB9 90 aa4.57□□□□□ -1.68
HDAC6-203ENST00000376619 KRTAP9-2Q9BYQ4 174 aa4.56□□□□□ -1.68
HDAC6-203ENST00000376619 FLGP20930 4061 aaPredicted RBP4.55□□□□□ -1.68
HDAC6-203ENST00000376619 SPRR2GQ9BYE4 73 aa4.51□□□□□ -1.69
HDAC6-203ENST00000376619 KRTAP12-3P60328 96 aa4.5□□□□□ -1.69
HDAC6-203ENST00000376619 CRCT1Q9UGL9 99 aa4.49□□□□□ -1.69
HDAC6-203ENST00000376619 KRTAP9-8Q9BYQ0 159 aa4.46□□□□□ -1.7
HDAC6-203ENST00000376619 KMT2DO14686 5537 aa4.42□□□□□ -1.7
HDAC6-203ENST00000376619 KRTAP10-7P60409 375 aaPredicted RBP4.4□□□□□ -1.7
HDAC6-203ENST00000376619 DSTQ03001 7570 aaKnown RBP4.39□□□□□ -1.71
HDAC6-203ENST00000376619 SYNE1Q8NF91 8797 aaKnown RBP4.38□□□□□ -1.71
HDAC6-203ENST00000376619 MT1BP07438 61 aa4.35□□□□□ -1.71
HDAC6-203ENST00000376619 KRTAP4-8A0A0G2JLE6 195 aa4.34□□□□□ -1.71
HDAC6-203ENST00000376619 KRTAP4-8Q9BYQ9 185 aa4.34□□□□□ -1.71
HDAC6-203ENST00000376619 KRTAP9-6A0A140TA67 174 aa4.33□□□□□ -1.72
HDAC6-203ENST00000376619 MT1XP80297 61 aa4.32□□□□□ -1.72
HDAC6-203ENST00000376619 LCE2BO14633 110 aa4.31□□□□□ -1.72
HDAC6-203ENST00000376619 KRTAP9-3Q9BYQ3 159 aa4.31□□□□□ -1.72
HDAC6-203ENST00000376619 KRTAP10-5P60370 271 aa4.29□□□□□ -1.72
HDAC6-203ENST00000376619 KRTAP19-5Q3LI72 72 aa4.28□□□□□ -1.73
HDAC6-203ENST00000376619 LCE2DQ5TA82 110 aaPredicted RBP4.26□□□□□ -1.73
HDAC6-203ENST00000376619 FCGBPQ9Y6R7 5405 aaPredicted RBP4.25□□□□□ -1.73
HDAC6-203ENST00000376619 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
HDAC6-203ENST00000376619 KRTAP8-1Q8IUC2 63 aa4.19□□□□□ -1.74
HDAC6-203ENST00000376619 KRTAP4-7Q9BYR0 210 aa4.14□□□□□ -1.75
HDAC6-203ENST00000376619 SSPOA2VEC9 5147 aa4.09□□□□□ -1.75
HDAC6-203ENST00000376619 SPRR2FQ96RM1 72 aa4.05□□□□□ -1.76
HDAC6-203ENST00000376619 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
HDAC6-203ENST00000376619 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
HDAC6-203ENST00000376619 SYNE2Q8WXH0 6885 aaKnown RBP4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms