RNA–Protein interactions for RNA: ENST00000376228.9

HLA-C-201, Transcript of major histocompatibility complex, class I, C, humanhuman

APPRIS P2 BASIC

Gene HLA-C, Length 1,536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-201ENST00000376228 V9GYY9 64 aa10.73□□□□□ -0.69
HLA-C-201ENST00000376228 KRTAP19-2Q3LHN2 52 aa10.72□□□□□ -0.69
HLA-C-201ENST00000376228 LCE2CQ5TA81 110 aa10.71□□□□□ -0.69
HLA-C-201ENST00000376228 RBM12B-AS1Q9P1G2 102 aa10.65□□□□□ -0.7
HLA-C-201ENST00000376228 SPTSSBQ8NFR3 76 aa10.63□□□□□ -0.71
HLA-C-201ENST00000376228 LINC01558Q9Y6Z2 57 aa10.63□□□□□ -0.71
HLA-C-201ENST00000376228 H1FX-AS1Q4G0G2 97 aa10.59□□□□□ -0.71
HLA-C-201ENST00000376228 MT1HP80294 61 aa10.58□□□□□ -0.72
HLA-C-201ENST00000376228 KRTAP9-2Q9BYQ4 174 aa10.53□□□□□ -0.72
HLA-C-201ENST00000376228 S4R3F8 94 aa10.49□□□□□ -0.73
HLA-C-201ENST00000376228 LCA10Q71F78 164 aa10.47□□□□□ -0.73
HLA-C-201ENST00000376228 KRTAP3-3Q9BYR6 98 aa10.47□□□□□ -0.73
HLA-C-201ENST00000376228 PRR15LQ9BU68 103 aa10.46□□□□□ -0.74
HLA-C-201ENST00000376228 FLGP20930 4061 aaPredicted RBP10.45□□□□□ -0.74
HLA-C-201ENST00000376228 PSPHP1O15172 72 aa10.45□□□□□ -0.74
HLA-C-201ENST00000376228 Q5VV11 94 aa10.43□□□□□ -0.74
HLA-C-201ENST00000376228 M0R2T5 61 aa10.4□□□□□ -0.74
HLA-C-201ENST00000376228 A0A1B0GU69 56 aa10.38□□□□□ -0.75
HLA-C-201ENST00000376228 KRTAP10-6P60371 365 aaPredicted RBP10.34□□□□□ -0.75
HLA-C-201ENST00000376228 LORP23490 312 aaPredicted RBP10.32□□□□□ -0.76
HLA-C-201ENST00000376228 SEC61GP60059 68 aa10.31□□□□□ -0.76
HLA-C-201ENST00000376228 CSAG1Q6PB30 78 aa10.28□□□□□ -0.76
HLA-C-201ENST00000376228 LCE2DQ5TA82 110 aaPredicted RBP10.24□□□□□ -0.77
HLA-C-201ENST00000376228 A6NED7 52 aa10.16□□□□□ -0.78
HLA-C-201ENST00000376228 H0YAA0 97 aa10.13□□□□□ -0.79
HLA-C-201ENST00000376228 KRTAP3-2Q9BYR7 98 aa10.12□□□□□ -0.79
HLA-C-201ENST00000376228 UQCR11O14957 56 aa10.12□□□□□ -0.79
HLA-C-201ENST00000376228 FSIP2Q5CZC0 6907 aa10.11□□□□□ -0.79
HLA-C-201ENST00000376228 KRTAP9-6A0A140TA67 174 aa10.1□□□□□ -0.79
HLA-C-201ENST00000376228 BRK1Q8WUW1 75 aa10.08□□□□□ -0.8
HLA-C-201ENST00000376228 A0A1B0GU33 70 aa10.07□□□□□ -0.8
HLA-C-201ENST00000376228 CDC42SE1Q9NRR8 79 aa10.05□□□□□ -0.8
HLA-C-201ENST00000376228 SPATA8Q6RVD6 105 aa10.03□□□□□ -0.8
HLA-C-201ENST00000376228 ADM2Q7Z4H4 148 aa10.02□□□□□ -0.81
HLA-C-201ENST00000376228 KRTAP9-8Q9BYQ0 159 aa10.02□□□□□ -0.81
HLA-C-201ENST00000376228 MIR22HGQ0VDD5 57 aa9.98□□□□□ -0.81
HLA-C-201ENST00000376228 P0C880 135 aa9.97□□□□□ -0.81
HLA-C-201ENST00000376228 PRO0628Q9UI54 55 aa9.97□□□□□ -0.81
HLA-C-201ENST00000376228 CRCT1Q9UGL9 99 aa9.95□□□□□ -0.82
HLA-C-201ENST00000376228 A8MU10 97 aa9.92□□□□□ -0.82
HLA-C-201ENST00000376228 MT2AP02795 61 aa9.9□□□□□ -0.82
HLA-C-201ENST00000376228 MT1FP04733 61 aa9.84□□□□□ -0.83
HLA-C-201ENST00000376228 M0QZ58 72 aa9.82□□□□□ -0.84
HLA-C-201ENST00000376228 KRTAP13-4Q3LI77 160 aa9.8□□□□□ -0.84
HLA-C-201ENST00000376228 KRTAP10-10P60014 251 aa9.78□□□□□ -0.84
HLA-C-201ENST00000376228 USH2AO75445 5202 aa9.72□□□□□ -0.85
HLA-C-201ENST00000376228 KRTAP9-3Q9BYQ3 159 aa9.69□□□□□ -0.86
HLA-C-201ENST00000376228 CRIPTQ9P021 101 aa9.66□□□□□ -0.86
HLA-C-201ENST00000376228 R4GN34 69 aa9.66□□□□□ -0.86
HLA-C-201ENST00000376228 LCE2BO14633 110 aa9.64□□□□□ -0.87
HLA-C-201ENST00000376228 SSPOA2VEC9 5147 aa9.64□□□□□ -0.87
HLA-C-201ENST00000376228 A0A0D9SG42 100 aa9.56□□□□□ -0.88
HLA-C-201ENST00000376228 PMAIP1Q13794 54 aa9.56□□□□□ -0.88
HLA-C-201ENST00000376228 A6NN06 94 aa9.54□□□□□ -0.88
HLA-C-201ENST00000376228 K7ERS5 55 aa9.53□□□□□ -0.88
HLA-C-201ENST00000376228 KRTAP12-1P59990 96 aa9.46□□□□□ -0.89
HLA-C-201ENST00000376228 LINC01554Q52M75 96 aa9.41□□□□□ -0.9
HLA-C-201ENST00000376228 KRTAP19-1Q8IUB9 90 aa9.41□□□□□ -0.9
HLA-C-201ENST00000376228 SPRR2GQ9BYE4 73 aa9.41□□□□□ -0.9
HLA-C-201ENST00000376228 KRTAP12-2P59991 146 aa9.41□□□□□ -0.9
HLA-C-201ENST00000376228 SPINT4Q6UDR6 99 aa9.36□□□□□ -0.91
HLA-C-201ENST00000376228 FCGBPQ9Y6R7 5405 aaPredicted RBP9.36□□□□□ -0.91
HLA-C-201ENST00000376228 SVIPQ8NHG7 77 aa9.31□□□□□ -0.92
HLA-C-201ENST00000376228 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.27□□□□□ -0.93
HLA-C-201ENST00000376228 KRTAP19-6Q3LI70 58 aa9.24□□□□□ -0.93
HLA-C-201ENST00000376228 KTN1-AS1Q86SY8 53 aa9.21□□□□□ -0.93
HLA-C-201ENST00000376228 KRTAP19-8Q3LI54 63 aa9.17□□□□□ -0.94
HLA-C-201ENST00000376228 ROMO1P60602 79 aa9.15□□□□□ -0.95
HLA-C-201ENST00000376228 KRTAP9-7A8MTY7 169 aa9.1□□□□□ -0.95
HLA-C-201ENST00000376228 MACF1Q9UPN3 7388 aaKnown RBP9.09□□□□□ -0.95
HLA-C-201ENST00000376228 PLAC4Q8WY50 150 aa9.07□□□□□ -0.96
HLA-C-201ENST00000376228 MT1BP07438 61 aa9.05□□□□□ -0.96
HLA-C-201ENST00000376228 CAMK2N1Q7Z7J9 78 aa9.05□□□□□ -0.96
HLA-C-201ENST00000376228 SYNE2Q8WXH0 6885 aaKnown RBP8.96□□□□□ -0.97
HLA-C-201ENST00000376228 C10orf95Q9H7T3 257 aa8.95□□□□□ -0.98
HLA-C-201ENST00000376228 PRAC1Q96KF2 57 aa8.9□□□□□ -0.99
HLA-C-201ENST00000376228 KRTAP10-5P60370 271 aa8.8□□□□□ -1
HLA-C-201ENST00000376228 KRTAP25-1Q3LHN0 102 aa8.77□□□□□ -1.01
HLA-C-201ENST00000376228 MT1XP80297 61 aa8.71□□□□□ -1.01
HLA-C-201ENST00000376228 TNP1P09430 55 aa8.67□□□□□ -1.02
HLA-C-201ENST00000376228 KRTAP6-3Q3LI67 103 aa8.67□□□□□ -1.02
HLA-C-201ENST00000376228 PRO2289Q9P1D8 64 aa8.63□□□□□ -1.03
HLA-C-201ENST00000376228 KRTAP23-1A1A580 65 aa8.54□□□□□ -1.04
HLA-C-201ENST00000376228 PP632Q6XCG6 107 aa8.51□□□□□ -1.05
HLA-C-201ENST00000376228 MUC12Q9UKN1 5478 aa8.45□□□□□ -1.06
HLA-C-201ENST00000376228 KMT2DO14686 5537 aa8.42□□□□□ -1.06
HLA-C-201ENST00000376228 KRTAP5-9P26371 169 aa8.34□□□□□ -1.08
HLA-C-201ENST00000376228 KRTAP10-7P60409 375 aaPredicted RBP8.33□□□□□ -1.08
HLA-C-201ENST00000376228 NEBP20929 6669 aa8.33□□□□□ -1.08
HLA-C-201ENST00000376228 KRTAP10-12P60413 245 aa8.29□□□□□ -1.08
HLA-C-201ENST00000376228 LCE3AQ5TA76 89 aa8.25□□□□□ -1.09
HLA-C-201ENST00000376228 MDN1Q9NU22 5596 aa8.21□□□□□ -1.09
HLA-C-201ENST00000376228 KRTAP8-1Q8IUC2 63 aa8.18□□□□□ -1.1
HLA-C-201ENST00000376228 SPRR2FQ96RM1 72 aa8.18□□□□□ -1.1
HLA-C-201ENST00000376228 KRTAP4-8A0A0G2JLE6 195 aa8.15□□□□□ -1.1
HLA-C-201ENST00000376228 KRTAP4-8Q9BYQ9 185 aa8.15□□□□□ -1.1
HLA-C-201ENST00000376228 SPRR2EP22531 72 aa8.03□□□□□ -1.12
HLA-C-201ENST00000376228 SPRR2BP35325 72 aa8.03□□□□□ -1.12
HLA-C-201ENST00000376228 SPRR2AP35326 72 aa8.03□□□□□ -1.12
HLA-C-201ENST00000376228 KRTAP20-1Q3LI63 56 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms