RNA–Protein interactions for RNA: ENST00000375859.3

SPIN1-201, Transcript of spindlin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPIN1, Length 4,484 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN1-201ENST00000375859 PMAIP1Q13794 54 aa6.46□□□□□ -1.37
SPIN1-201ENST00000375859 TPRXLQ17RH7 258 aa6.46□□□□□ -1.37
SPIN1-201ENST00000375859 SVIPQ8NHG7 77 aa6.45□□□□□ -1.38
SPIN1-201ENST00000375859 CDC42SE1Q9NRR8 79 aa6.43□□□□□ -1.38
SPIN1-201ENST00000375859 UQCR11O14957 56 aa6.42□□□□□ -1.38
SPIN1-201ENST00000375859 MIR22HGQ0VDD5 57 aa6.4□□□□□ -1.38
SPIN1-201ENST00000375859 S4R3F8 94 aa6.4□□□□□ -1.39
SPIN1-201ENST00000375859 RBM12B-AS1Q9P1G2 102 aa6.4□□□□□ -1.39
SPIN1-201ENST00000375859 BIRC6Q9NR09 4857 aa6.37□□□□□ -1.39
SPIN1-201ENST00000375859 SEC61BP60468 96 aaKnown RBP6.35□□□□□ -1.39
SPIN1-201ENST00000375859 A0A1B0GU33 70 aa6.33□□□□□ -1.4
SPIN1-201ENST00000375859 H1FX-AS1Q4G0G2 97 aa6.32□□□□□ -1.4
SPIN1-201ENST00000375859 SPATA8Q6RVD6 105 aa6.31□□□□□ -1.4
SPIN1-201ENST00000375859 A0A0D9SG42 100 aa6.25□□□□□ -1.41
SPIN1-201ENST00000375859 KRTAP3-3Q9BYR6 98 aa6.25□□□□□ -1.41
SPIN1-201ENST00000375859 CSAG1Q6PB30 78 aa6.24□□□□□ -1.41
SPIN1-201ENST00000375859 HERC1Q15751 4861 aa6.23□□□□□ -1.41
SPIN1-201ENST00000375859 ADM2Q7Z4H4 148 aa6.21□□□□□ -1.42
SPIN1-201ENST00000375859 H0YAA0 97 aa6.21□□□□□ -1.42
SPIN1-201ENST00000375859 PCLOQ9Y6V0 5065 aa6.19□□□□□ -1.42
SPIN1-201ENST00000375859 KRTAP4-1Q9BYQ7 146 aa6.18□□□□□ -1.42
SPIN1-201ENST00000375859 P0C880 135 aa6.18□□□□□ -1.42
SPIN1-201ENST00000375859 A6NN06 94 aa6.17□□□□□ -1.42
SPIN1-201ENST00000375859 MUC2Q02817 5179 aa6.16□□□□□ -1.42
SPIN1-201ENST00000375859 K7ERS5 55 aa6.13□□□□□ -1.43
SPIN1-201ENST00000375859 KRTAP10-6P60371 365 aaPredicted RBP6.12□□□□□ -1.43
SPIN1-201ENST00000375859 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
SPIN1-201ENST00000375859 KTN1-AS1Q86SY8 53 aa6.11□□□□□ -1.43
SPIN1-201ENST00000375859 PRAC1Q96KF2 57 aa6.08□□□□□ -1.44
SPIN1-201ENST00000375859 KRTAP3-2Q9BYR7 98 aa6.08□□□□□ -1.44
SPIN1-201ENST00000375859 KRTAP13-4Q3LI77 160 aa6.07□□□□□ -1.44
SPIN1-201ENST00000375859 SPINT4Q6UDR6 99 aa6.06□□□□□ -1.44
SPIN1-201ENST00000375859 M0QZ58 72 aa6.01□□□□□ -1.45
SPIN1-201ENST00000375859 MUC17Q685J3 4493 aa6.01□□□□□ -1.45
SPIN1-201ENST00000375859 R4GN34 69 aa6□□□□□ -1.45
SPIN1-201ENST00000375859 HMCN2Q8NDA2 5059 aa5.99□□□□□ -1.45
SPIN1-201ENST00000375859 CRIPTQ9P021 101 aa5.97□□□□□ -1.45
SPIN1-201ENST00000375859 M0R2T5 61 aa5.95□□□□□ -1.46
SPIN1-201ENST00000375859 RNF213Q63HN8 5207 aa5.92□□□□□ -1.46
SPIN1-201ENST00000375859 FAT4Q6V0I7 4981 aa5.89□□□□□ -1.47
SPIN1-201ENST00000375859 UBR4Q5T4S7 5183 aa5.89□□□□□ -1.47
SPIN1-201ENST00000375859 LORP23490 312 aaPredicted RBP5.88□□□□□ -1.47
SPIN1-201ENST00000375859 KRTAP12-2P59991 146 aa5.88□□□□□ -1.47
SPIN1-201ENST00000375859 KRTAP19-2Q3LHN2 52 aa5.84□□□□□ -1.48
SPIN1-201ENST00000375859 ROMO1P60602 79 aa5.82□□□□□ -1.48
SPIN1-201ENST00000375859 KRTAP12-1P59990 96 aa5.81□□□□□ -1.48
SPIN1-201ENST00000375859 FLGP20930 4061 aaPredicted RBP5.77□□□□□ -1.49
SPIN1-201ENST00000375859 CAMK2N1Q7Z7J9 78 aa5.73□□□□□ -1.49
SPIN1-201ENST00000375859 C10orf95Q9H7T3 257 aa5.71□□□□□ -1.5
SPIN1-201ENST00000375859 LCE2CQ5TA81 110 aa5.69□□□□□ -1.5
SPIN1-201ENST00000375859 KRTAP25-1Q3LHN0 102 aa5.69□□□□□ -1.5
SPIN1-201ENST00000375859 MT1HP80294 61 aa5.65□□□□□ -1.51
SPIN1-201ENST00000375859 KRTAP10-10P60014 251 aa5.64□□□□□ -1.51
SPIN1-201ENST00000375859 PLAC4Q8WY50 150 aa5.52□□□□□ -1.53
SPIN1-201ENST00000375859 MT1FP04733 61 aa5.49□□□□□ -1.53
SPIN1-201ENST00000375859 MT2AP02795 61 aa5.48□□□□□ -1.53
SPIN1-201ENST00000375859 KRTAP9-8Q9BYQ0 159 aa5.42□□□□□ -1.54
SPIN1-201ENST00000375859 KRTAP19-1Q8IUB9 90 aa5.41□□□□□ -1.54
SPIN1-201ENST00000375859 SPRR2GQ9BYE4 73 aa5.38□□□□□ -1.55
SPIN1-201ENST00000375859 TNP1P09430 55 aa5.35□□□□□ -1.55
SPIN1-201ENST00000375859 KRTAP9-3Q9BYQ3 159 aa5.2□□□□□ -1.58
SPIN1-201ENST00000375859 MT1BP07438 61 aa5.18□□□□□ -1.58
SPIN1-201ENST00000375859 PP632Q6XCG6 107 aa5.18□□□□□ -1.58
SPIN1-201ENST00000375859 USH2AO75445 5202 aa5.18□□□□□ -1.58
SPIN1-201ENST00000375859 KRTAP19-8Q3LI54 63 aa5.16□□□□□ -1.58
SPIN1-201ENST00000375859 LCE2AQ5TA79 106 aaPredicted RBP5.13□□□□□ -1.59
SPIN1-201ENST00000375859 FSIP2Q5CZC0 6907 aa5.12□□□□□ -1.59
SPIN1-201ENST00000375859 LCE2BO14633 110 aa5.09□□□□□ -1.59
SPIN1-201ENST00000375859 MT1XP80297 61 aa5.08□□□□□ -1.6
SPIN1-201ENST00000375859 LCE3AQ5TA76 89 aa5.08□□□□□ -1.6
SPIN1-201ENST00000375859 PRO2289Q9P1D8 64 aa5.07□□□□□ -1.6
SPIN1-201ENST00000375859 KRTAP10-5P60370 271 aa5.07□□□□□ -1.6
SPIN1-201ENST00000375859 KRTAP15-1Q3LI76 137 aa5.03□□□□□ -1.6
SPIN1-201ENST00000375859 NDUFAF8A1L188 74 aa5□□□□□ -1.61
SPIN1-201ENST00000375859 KRTAP10-12P60413 245 aa4.99□□□□□ -1.61
SPIN1-201ENST00000375859 KRTAP10-7P60409 375 aaPredicted RBP4.99□□□□□ -1.61
SPIN1-201ENST00000375859 KRTAP23-1A1A580 65 aa4.92□□□□□ -1.62
SPIN1-201ENST00000375859 KMT2DO14686 5537 aa4.92□□□□□ -1.62
SPIN1-201ENST00000375859 LUZP6Q538Z0 58 aa4.91□□□□□ -1.62
SPIN1-201ENST00000375859 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
SPIN1-201ENST00000375859 KRTAP4-8A0A0G2JLE6 195 aa4.82□□□□□ -1.64
SPIN1-201ENST00000375859 H3BS24 57 aa4.82□□□□□ -1.64
SPIN1-201ENST00000375859 KRTAP4-8Q9BYQ9 185 aa4.82□□□□□ -1.64
SPIN1-201ENST00000375859 KRTAP8-1Q8IUC2 63 aa4.8□□□□□ -1.64
SPIN1-201ENST00000375859 SSPOA2VEC9 5147 aa4.78□□□□□ -1.64
SPIN1-201ENST00000375859 KRTAP19-5Q3LI72 72 aa4.75□□□□□ -1.65
SPIN1-201ENST00000375859 KRTAP19-6Q3LI70 58 aa4.59□□□□□ -1.68
SPIN1-201ENST00000375859 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
SPIN1-201ENST00000375859 FCGBPQ9Y6R7 5405 aaPredicted RBP4.54□□□□□ -1.68
SPIN1-201ENST00000375859 KRTAP19-7Q3SYF9 63 aa4.5□□□□□ -1.69
SPIN1-201ENST00000375859 LCE2DQ5TA82 110 aaPredicted RBP4.49□□□□□ -1.69
SPIN1-201ENST00000375859 LCE3CQ5T5A8 94 aa4.49□□□□□ -1.69
SPIN1-201ENST00000375859 KRTAP4-7Q9BYR0 210 aa4.49□□□□□ -1.69
SPIN1-201ENST00000375859 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
SPIN1-201ENST00000375859 KRTAP9-2Q9BYQ4 174 aa4.42□□□□□ -1.7
SPIN1-201ENST00000375859 MT1EP04732 61 aa4.42□□□□□ -1.7
SPIN1-201ENST00000375859 MACF1Q9UPN3 7388 aaKnown RBP4.41□□□□□ -1.7
SPIN1-201ENST00000375859 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
SPIN1-201ENST00000375859 SYNE2Q8WXH0 6885 aaKnown RBP4.38□□□□□ -1.71
SPIN1-201ENST00000375859 MT1LQ93083 61 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms