RNA–Protein interactions for RNA: ENST00000374165.5

C9orf43-202, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,049 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-202ENST00000374165 LCE2CQ5TA81 110 aa8.81□□□□□ -1
C9orf43-202ENST00000374165 V9GYY9 64 aa8.81□□□□□ -1
C9orf43-202ENST00000374165 RBM12B-AS1Q9P1G2 102 aa8.8□□□□□ -1
C9orf43-202ENST00000374165 PSPHP1O15172 72 aa8.77□□□□□ -1.01
C9orf43-202ENST00000374165 LINC01558Q9Y6Z2 57 aa8.74□□□□□ -1.01
C9orf43-202ENST00000374165 PRR15LQ9BU68 103 aa8.71□□□□□ -1.01
C9orf43-202ENST00000374165 FLGP20930 4061 aaPredicted RBP8.7□□□□□ -1.02
C9orf43-202ENST00000374165 Q5VV11 94 aa8.68□□□□□ -1.02
C9orf43-202ENST00000374165 H1FX-AS1Q4G0G2 97 aa8.66□□□□□ -1.02
C9orf43-202ENST00000374165 MT1HP80294 61 aa8.62□□□□□ -1.03
C9orf43-202ENST00000374165 SPTSSBQ8NFR3 76 aa8.62□□□□□ -1.03
C9orf43-202ENST00000374165 A0A1B0GU69 56 aa8.58□□□□□ -1.04
C9orf43-202ENST00000374165 LCA10Q71F78 164 aa8.58□□□□□ -1.04
C9orf43-202ENST00000374165 KRTAP3-3Q9BYR6 98 aa8.56□□□□□ -1.04
C9orf43-202ENST00000374165 S4R3F8 94 aa8.54□□□□□ -1.04
C9orf43-202ENST00000374165 LCE2AQ5TA79 106 aaPredicted RBP8.52□□□□□ -1.05
C9orf43-202ENST00000374165 BRK1Q8WUW1 75 aa8.51□□□□□ -1.05
C9orf43-202ENST00000374165 A6NED7 52 aa8.47□□□□□ -1.05
C9orf43-202ENST00000374165 M0R2T5 61 aa8.47□□□□□ -1.05
C9orf43-202ENST00000374165 SEC61GP60059 68 aa8.45□□□□□ -1.06
C9orf43-202ENST00000374165 A8MU10 97 aa8.4□□□□□ -1.06
C9orf43-202ENST00000374165 CSAG1Q6PB30 78 aa8.36□□□□□ -1.07
C9orf43-202ENST00000374165 PRO0628Q9UI54 55 aa8.36□□□□□ -1.07
C9orf43-202ENST00000374165 KRTAP10-6P60371 365 aaPredicted RBP8.34□□□□□ -1.07
C9orf43-202ENST00000374165 UQCR11O14957 56 aa8.33□□□□□ -1.08
C9orf43-202ENST00000374165 CDC42SE1Q9NRR8 79 aa8.33□□□□□ -1.08
C9orf43-202ENST00000374165 LORP23490 312 aaPredicted RBP8.32□□□□□ -1.08
C9orf43-202ENST00000374165 KRTAP9-8Q9BYQ0 159 aa8.28□□□□□ -1.08
C9orf43-202ENST00000374165 KRTAP3-2Q9BYR7 98 aa8.28□□□□□ -1.08
C9orf43-202ENST00000374165 A0A1B0GU33 70 aa8.27□□□□□ -1.09
C9orf43-202ENST00000374165 MIR22HGQ0VDD5 57 aa8.25□□□□□ -1.09
C9orf43-202ENST00000374165 SPATA8Q6RVD6 105 aa8.25□□□□□ -1.09
C9orf43-202ENST00000374165 P0C880 135 aa8.21□□□□□ -1.1
C9orf43-202ENST00000374165 ADM2Q7Z4H4 148 aa8.2□□□□□ -1.1
C9orf43-202ENST00000374165 H0YAA0 97 aa8.2□□□□□ -1.1
C9orf43-202ENST00000374165 MT2AP02795 61 aa8.2□□□□□ -1.1
C9orf43-202ENST00000374165 MT1FP04733 61 aa8.17□□□□□ -1.1
C9orf43-202ENST00000374165 KRTAP10-10P60014 251 aa8.1□□□□□ -1.11
C9orf43-202ENST00000374165 KRTAP13-4Q3LI77 160 aa8.1□□□□□ -1.11
C9orf43-202ENST00000374165 PMAIP1Q13794 54 aa8.03□□□□□ -1.12
C9orf43-202ENST00000374165 KRTAP9-3Q9BYQ3 159 aa7.98□□□□□ -1.13
C9orf43-202ENST00000374165 SVIPQ8NHG7 77 aa7.97□□□□□ -1.13
C9orf43-202ENST00000374165 A6NN06 94 aa7.96□□□□□ -1.13
C9orf43-202ENST00000374165 A0A0D9SG42 100 aa7.95□□□□□ -1.14
C9orf43-202ENST00000374165 M0QZ58 72 aa7.95□□□□□ -1.14
C9orf43-202ENST00000374165 KRTAP19-1Q8IUB9 90 aa7.91□□□□□ -1.14
C9orf43-202ENST00000374165 R4GN34 69 aa7.9□□□□□ -1.14
C9orf43-202ENST00000374165 SPRR2GQ9BYE4 73 aa7.85□□□□□ -1.15
C9orf43-202ENST00000374165 CRIPTQ9P021 101 aa7.85□□□□□ -1.15
C9orf43-202ENST00000374165 LCE2BO14633 110 aa7.84□□□□□ -1.15
C9orf43-202ENST00000374165 FSIP2Q5CZC0 6907 aa7.83□□□□□ -1.16
C9orf43-202ENST00000374165 K7ERS5 55 aa7.81□□□□□ -1.16
C9orf43-202ENST00000374165 LINC01554Q52M75 96 aa7.79□□□□□ -1.16
C9orf43-202ENST00000374165 USH2AO75445 5202 aa7.78□□□□□ -1.16
C9orf43-202ENST00000374165 KRTAP12-2P59991 146 aa7.78□□□□□ -1.16
C9orf43-202ENST00000374165 LCE2DQ5TA82 110 aaPredicted RBP7.78□□□□□ -1.16
C9orf43-202ENST00000374165 KRTAP12-1P59990 96 aa7.78□□□□□ -1.16
C9orf43-202ENST00000374165 SPINT4Q6UDR6 99 aa7.74□□□□□ -1.17
C9orf43-202ENST00000374165 KTN1-AS1Q86SY8 53 aa7.73□□□□□ -1.17
C9orf43-202ENST00000374165 KRTAP9-2Q9BYQ4 174 aa7.71□□□□□ -1.17
C9orf43-202ENST00000374165 KRTAP19-8Q3LI54 63 aa7.68□□□□□ -1.18
C9orf43-202ENST00000374165 MT1BP07438 61 aa7.66□□□□□ -1.18
C9orf43-202ENST00000374165 SSPOA2VEC9 5147 aa7.59□□□□□ -1.2
C9orf43-202ENST00000374165 ROMO1P60602 79 aa7.55□□□□□ -1.2
C9orf43-202ENST00000374165 PRAC1Q96KF2 57 aa7.54□□□□□ -1.2
C9orf43-202ENST00000374165 PLAC4Q8WY50 150 aa7.47□□□□□ -1.21
C9orf43-202ENST00000374165 CAMK2N1Q7Z7J9 78 aa7.41□□□□□ -1.22
C9orf43-202ENST00000374165 KRTAP19-6Q3LI70 58 aa7.37□□□□□ -1.23
C9orf43-202ENST00000374165 CRCT1Q9UGL9 99 aa7.37□□□□□ -1.23
C9orf43-202ENST00000374165 C10orf95Q9H7T3 257 aa7.35□□□□□ -1.23
C9orf43-202ENST00000374165 MT1XP80297 61 aa7.34□□□□□ -1.23
C9orf43-202ENST00000374165 KRTAP10-5P60370 271 aa7.32□□□□□ -1.24
C9orf43-202ENST00000374165 FCGBPQ9Y6R7 5405 aaPredicted RBP7.3□□□□□ -1.24
C9orf43-202ENST00000374165 KRTAP25-1Q3LHN0 102 aa7.3□□□□□ -1.24
C9orf43-202ENST00000374165 KRTAP9-6A0A140TA67 174 aa7.2□□□□□ -1.26
C9orf43-202ENST00000374165 PRO2289Q9P1D8 64 aa7.19□□□□□ -1.26
C9orf43-202ENST00000374165 TNP1P09430 55 aa7.06□□□□□ -1.28
C9orf43-202ENST00000374165 KRTAP10-7P60409 375 aaPredicted RBP7.05□□□□□ -1.28
C9orf43-202ENST00000374165 MACF1Q9UPN3 7388 aaKnown RBP7.04□□□□□ -1.28
C9orf43-202ENST00000374165 KMT2DO14686 5537 aa7.03□□□□□ -1.28
C9orf43-202ENST00000374165 KRTAP10-12P60413 245 aa6.93□□□□□ -1.3
C9orf43-202ENST00000374165 PP632Q6XCG6 107 aa6.91□□□□□ -1.3
C9orf43-202ENST00000374165 SYNE2Q8WXH0 6885 aaKnown RBP6.9□□□□□ -1.31
C9orf43-202ENST00000374165 KRTAP4-8A0A0G2JLE6 195 aa6.89□□□□□ -1.31
C9orf43-202ENST00000374165 KRTAP4-8Q9BYQ9 185 aa6.89□□□□□ -1.31
C9orf43-202ENST00000374165 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
C9orf43-202ENST00000374165 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.84□□□□□ -1.31
C9orf43-202ENST00000374165 LCE3AQ5TA76 89 aa6.77□□□□□ -1.32
C9orf43-202ENST00000374165 KRTAP8-1Q8IUC2 63 aa6.69□□□□□ -1.34
C9orf43-202ENST00000374165 MUC12Q9UKN1 5478 aa6.58□□□□□ -1.36
C9orf43-202ENST00000374165 KRTAP19-7Q3SYF9 63 aa6.56□□□□□ -1.36
C9orf43-202ENST00000374165 KRTAP9-7A8MTY7 169 aa6.55□□□□□ -1.36
C9orf43-202ENST00000374165 KRTAP19-5Q3LI72 72 aa6.55□□□□□ -1.36
C9orf43-202ENST00000374165 KRTAP5-9P26371 169 aa6.55□□□□□ -1.36
C9orf43-202ENST00000374165 KRTAP6-3Q3LI67 103 aa6.55□□□□□ -1.36
C9orf43-202ENST00000374165 SPRR2FQ96RM1 72 aa6.54□□□□□ -1.36
C9orf43-202ENST00000374165 KRTAP15-1Q3LI76 137 aa6.5□□□□□ -1.37
C9orf43-202ENST00000374165 KRTAP12-3P60328 96 aa6.49□□□□□ -1.37
C9orf43-202ENST00000374165 MDN1Q9NU22 5596 aa6.45□□□□□ -1.38
C9orf43-202ENST00000374165 MT1EP04732 61 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms