RNA–Protein interactions for RNA: ENST00000373956.7

PCDH15-204, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,931 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-204ENST00000373956 COL6A5A8TX70 2615 aa3.32□□□□□ -1.88
PCDH15-204ENST00000373956 DYNC1H1Q14204 4646 aaKnown RBP3.31□□□□□ -1.88
PCDH15-204ENST00000373956 ALMS1Q8TCU4 4167 aa3.31□□□□□ -1.88
PCDH15-204ENST00000373956 PKD1P98161 4303 aa3.31□□□□□ -1.88
PCDH15-204ENST00000373956 DNAH5Q8TE73 4624 aa3.31□□□□□ -1.88
PCDH15-204ENST00000373956 TEX15Q9BXT5 2789 aa3.31□□□□□ -1.88
PCDH15-204ENST00000373956 HECTD4Q9Y4D8 3996 aa3.3□□□□□ -1.88
PCDH15-204ENST00000373956 RYR1P21817 5038 aa3.29□□□□□ -1.88
PCDH15-204ENST00000373956 KRTAP12-1P59990 96 aa3.27□□□□□ -1.89
PCDH15-204ENST00000373956 PKHD1L1Q86WI1 4243 aa3.26□□□□□ -1.89
PCDH15-204ENST00000373956 PKHD1P08F94 4074 aa3.26□□□□□ -1.89
PCDH15-204ENST00000373956 COL7A1Q02388 2944 aa3.26□□□□□ -1.89
PCDH15-204ENST00000373956 PKD1L1Q8TDX9 2849 aa3.25□□□□□ -1.89
PCDH15-204ENST00000373956 FAT3Q8TDW7 4589 aa3.24□□□□□ -1.89
PCDH15-204ENST00000373956 MAP1AP78559 2803 aaPredicted RBP3.23□□□□□ -1.89
PCDH15-204ENST00000373956 NBEAL1Q6ZS30 2694 aa3.22□□□□□ -1.89
PCDH15-204ENST00000373956 KMT2CQ8NEZ4 4911 aaKnown RBP3.21□□□□□ -1.9
PCDH15-204ENST00000373956 KMT2AQ03164 3969 aa3.21□□□□□ -1.9
PCDH15-204ENST00000373956 HERC2O95714 4834 aa3.2□□□□□ -1.9
PCDH15-204ENST00000373956 INE1O15225 51 aa3.2□□□□□ -1.9
PCDH15-204ENST00000373956 NOTCH1P46531 2555 aa3.2□□□□□ -1.9
PCDH15-204ENST00000373956 APOBP04114 4563 aaKnown RBP3.19□□□□□ -1.9
PCDH15-204ENST00000373956 DMBT1Q9UGM3 2413 aaPredicted RBP3.18□□□□□ -1.9
PCDH15-204ENST00000373956 LRP1BQ9NZR2 4599 aa3.18□□□□□ -1.9
PCDH15-204ENST00000373956 EPPK1P58107 5090 aaKnown RBP3.17□□□□□ -1.9
PCDH15-204ENST00000373956 FLG2Q5D862 2391 aaPredicted RBP3.15□□□□□ -1.91
PCDH15-204ENST00000373956 ABCA13Q86UQ4 5058 aa3.14□□□□□ -1.91
PCDH15-204ENST00000373956 TENM3Q9P273 2699 aa3.14□□□□□ -1.91
PCDH15-204ENST00000373956 BIRC6Q9NR09 4857 aa3.13□□□□□ -1.91
PCDH15-204ENST00000373956 STAB2Q8WWQ8 2551 aa3.13□□□□□ -1.91
PCDH15-204ENST00000373956 VPS13BQ7Z7G8 4022 aa3.12□□□□□ -1.91
PCDH15-204ENST00000373956 KRTAP10-12P60413 245 aa3.12□□□□□ -1.91
PCDH15-204ENST00000373956 KRTAP3-1Q9BYR8 98 aa3.1□□□□□ -1.91
PCDH15-204ENST00000373956 FAT1Q14517 4588 aa3.1□□□□□ -1.91
PCDH15-204ENST00000373956 HSPG2P98160 4391 aa3.09□□□□□ -1.91
PCDH15-204ENST00000373956 PCLOQ9Y6V0 5065 aa3.07□□□□□ -1.92
PCDH15-204ENST00000373956 KIAA1109Q2LD37 5005 aa3.06□□□□□ -1.92
PCDH15-204ENST00000373956 KRTAP10-6P60371 365 aaPredicted RBP3.04□□□□□ -1.92
PCDH15-204ENST00000373956 HMCN2Q8NDA2 5059 aa3.02□□□□□ -1.93
PCDH15-204ENST00000373956 KRTAP10-5P60370 271 aa3.01□□□□□ -1.93
PCDH15-204ENST00000373956 LCE3AQ5TA76 89 aa3□□□□□ -1.93
PCDH15-204ENST00000373956 TNXBP22105 4242 aa3□□□□□ -1.93
PCDH15-204ENST00000373956 KRTAP10-4P60372 401 aaPredicted RBP3□□□□□ -1.93
PCDH15-204ENST00000373956 KRTAP12-3P60328 96 aa2.99□□□□□ -1.93
PCDH15-204ENST00000373956 TENM2Q9NT68 2774 aa2.92□□□□□ -1.94
PCDH15-204ENST00000373956 KRTAP8-1Q8IUC2 63 aa2.9□□□□□ -1.94
PCDH15-204ENST00000373956 HERC1Q15751 4861 aa2.89□□□□□ -1.95
PCDH15-204ENST00000373956 MUC17Q685J3 4493 aa2.89□□□□□ -1.95
PCDH15-204ENST00000373956 MYCBP2O75592 4640 aa2.89□□□□□ -1.95
PCDH15-204ENST00000373956 NBEAL2Q6ZNJ1 2754 aa2.89□□□□□ -1.95
PCDH15-204ENST00000373956 KRTAP17-1Q9BYP8 105 aa2.88□□□□□ -1.95
PCDH15-204ENST00000373956 KRTAP3-2Q9BYR7 98 aa2.88□□□□□ -1.95
PCDH15-204ENST00000373956 KRTAP3-3Q9BYR6 98 aa2.88□□□□□ -1.95
PCDH15-204ENST00000373956 LRP1Q07954 4544 aaKnown RBP2.87□□□□□ -1.95
PCDH15-204ENST00000373956 LORP23490 312 aaPredicted RBP2.86□□□□□ -1.95
PCDH15-204ENST00000373956 KRTAP23-1A1A580 65 aa2.83□□□□□ -1.96
PCDH15-204ENST00000373956 MT1HL1P0DM35 61 aa2.82□□□□□ -1.96
PCDH15-204ENST00000373956 TGP01266 2768 aa2.81□□□□□ -1.96
PCDH15-204ENST00000373956 KRTAP4-5Q9BYR2 181 aa2.79□□□□□ -1.96
PCDH15-204ENST00000373956 RNF213Q63HN8 5207 aa2.77□□□□□ -1.97
PCDH15-204ENST00000373956 UBR4Q5T4S7 5183 aa2.77□□□□□ -1.97
PCDH15-204ENST00000373956 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
PCDH15-204ENST00000373956 KRTAP19-2Q3LHN2 52 aa2.7□□□□□ -1.98
PCDH15-204ENST00000373956 LRP2P98164 4655 aa2.69□□□□□ -1.98
PCDH15-204ENST00000373956 SRRM2Q9UQ35 2752 aaKnown RBP2.69□□□□□ -1.98
PCDH15-204ENST00000373956 SPRR2FQ96RM1 72 aa2.67□□□□□ -1.98
PCDH15-204ENST00000373956 LPAP08519 4548 aa2.65□□□□□ -1.99
PCDH15-204ENST00000373956 KRTAP19-5Q3LI72 72 aa2.64□□□□□ -1.99
PCDH15-204ENST00000373956 FAT4Q6V0I7 4981 aa2.62□□□□□ -1.99
PCDH15-204ENST00000373956 MT1HP80294 61 aa2.61□□□□□ -1.99
PCDH15-204ENST00000373956 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
PCDH15-204ENST00000373956 SPRR2EP22531 72 aa2.59□□□□□ -2
PCDH15-204ENST00000373956 SPRR2BP35325 72 aa2.59□□□□□ -2
PCDH15-204ENST00000373956 SPRR2AP35326 72 aa2.59□□□□□ -2
PCDH15-204ENST00000373956 FLGP20930 4061 aaPredicted RBP2.58□□□□□ -2
PCDH15-204ENST00000373956 LCE3BQ5TA77 95 aa2.56□□□□□ -2
PCDH15-204ENST00000373956 KRTAP4-1Q9BYQ7 146 aa2.53□□□□□ -2
PCDH15-204ENST00000373956 MT2AP02795 61 aa2.53□□□□□ -2.01
PCDH15-204ENST00000373956 SPRR2DP22532 72 aa2.51□□□□□ -2.01
PCDH15-204ENST00000373956 SPRR2GQ9BYE4 73 aa2.48□□□□□ -2.01
PCDH15-204ENST00000373956 MT1FP04733 61 aa2.48□□□□□ -2.01
PCDH15-204ENST00000373956 MT1GP13640 62 aa2.45□□□□□ -2.02
PCDH15-204ENST00000373956 LCE2CQ5TA81 110 aa2.44□□□□□ -2.02
PCDH15-204ENST00000373956 LCE2BO14633 110 aa2.43□□□□□ -2.02
PCDH15-204ENST00000373956 MUC2Q02817 5179 aa2.42□□□□□ -2.02
PCDH15-204ENST00000373956 KRTAP12-4P60329 112 aa2.41□□□□□ -2.02
PCDH15-204ENST00000373956 USH2AO75445 5202 aa2.37□□□□□ -2.03
PCDH15-204ENST00000373956 KRTAP19-4Q3LI73 84 aa2.35□□□□□ -2.03
PCDH15-204ENST00000373956 LCE3DQ9BYE3 92 aa2.34□□□□□ -2.04
PCDH15-204ENST00000373956 SSPOA2VEC9 5147 aa2.31□□□□□ -2.04
PCDH15-204ENST00000373956 LCE2AQ5TA79 106 aaPredicted RBP2.3□□□□□ -2.04
PCDH15-204ENST00000373956 LCE3EQ5T5B0 92 aa2.28□□□□□ -2.04
PCDH15-204ENST00000373956 LCE2DQ5TA82 110 aaPredicted RBP2.27□□□□□ -2.05
PCDH15-204ENST00000373956 MT1XP80297 61 aa2.26□□□□□ -2.05
PCDH15-204ENST00000373956 KRTAP4-8A0A0G2JLE6 195 aa2.24□□□□□ -2.05
PCDH15-204ENST00000373956 MT4P47944 62 aa2.24□□□□□ -2.05
PCDH15-204ENST00000373956 KRTAP4-8Q9BYQ9 185 aa2.24□□□□□ -2.05
PCDH15-204ENST00000373956 KRTAP19-8Q3LI54 63 aa2.22□□□□□ -2.05
PCDH15-204ENST00000373956 KRTAP19-1Q8IUB9 90 aa2.22□□□□□ -2.05
PCDH15-204ENST00000373956 PRM1P04553 51 aa2.21□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms