RNA–Protein interactions for RNA: ENST00000373956.7

PCDH15-204, Transcript of protocadherin related 15, humanhuman

TSL 5

Gene PCDH15, Length 6,931 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-204ENST00000373956 NISCHQ9Y2I1 1504 aa11.76□□□□□ -0.53
PCDH15-204ENST00000373956 DCAF8L2P0C7V8 631 aa11.43□□□□□ -0.58
PCDH15-204ENST00000373956 PELP1Q8IZL8 1130 aaKnown RBP11.04□□□□□ -0.64
PCDH15-204ENST00000373956 EHMT2Q96KQ7 1210 aa10.86□□□□□ -0.67
PCDH15-204ENST00000373956 ERICH6Q7L0X2 663 aa10.77□□□□□ -0.68
PCDH15-204ENST00000373956 SUPT5HO00267 1087 aaKnown RBP10.75□□□□□ -0.69
PCDH15-204ENST00000373956 APLP2Q06481 763 aa10.57□□□□□ -0.72
PCDH15-204ENST00000373956 CCER1Q8TC90 406 aaPredicted RBP10.55□□□□□ -0.72
PCDH15-204ENST00000373956 CCDC180Q9P1Z9 1646 aa10.54□□□□□ -0.72
PCDH15-204ENST00000373956 TTBK1Q5TCY1 1321 aaPredicted RBP10.51□□□□□ -0.73
PCDH15-204ENST00000373956 SHROOM4Q9ULL8 1493 aa10.49□□□□□ -0.73
PCDH15-204ENST00000373956 FAM9AQ8IZU1 332 aaPredicted RBP10.45□□□□□ -0.74
PCDH15-204ENST00000373956 MYT1Q01538 1121 aa10.43□□□□□ -0.74
PCDH15-204ENST00000373956 CENPBP07199 599 aaPredicted RBP10.34□□□□□ -0.75
PCDH15-204ENST00000373956 RANGAP1P46060 587 aaPredicted RBP10.32□□□□□ -0.76
PCDH15-204ENST00000373956 PCGF6Q9BYE7 350 aa10.28□□□□□ -0.76
PCDH15-204ENST00000373956 ATP1B4Q9UN42 357 aaPredicted RBP10.28□□□□□ -0.76
PCDH15-204ENST00000373956 NEFLP07196 543 aa10.27□□□□□ -0.77
PCDH15-204ENST00000373956 YTHDC1Q96MU7 727 aaKnown RBP10.24□□□□□ -0.77
PCDH15-204ENST00000373956 DCAF1Q9Y4B6 1507 aa10.21□□□□□ -0.77
PCDH15-204ENST00000373956 DAXXQ9UER7 740 aaPredicted RBP10.18□□□□□ -0.78
PCDH15-204ENST00000373956 MYO15BQ96JP2 1530 aa10.17□□□□□ -0.78
PCDH15-204ENST00000373956 ZEB1P37275 1124 aaPredicted RBP10.07□□□□□ -0.8
PCDH15-204ENST00000373956 ZCCHC6Q5VYS8 1495 aaKnown RBP10.06□□□□□ -0.8
PCDH15-204ENST00000373956 POLR3GLQ9BT43 218 aa10.03□□□□□ -0.8
PCDH15-204ENST00000373956 MYT1LQ9UL68 1186 aa10□□□□□ -0.81
PCDH15-204ENST00000373956 ZNF316A6NFI3 1004 aaPredicted RBP9.95□□□□□ -0.82
PCDH15-204ENST00000373956 CHIC1Q5VXU3 224 aa9.94□□□□□ -0.82
PCDH15-204ENST00000373956 CNGB1Q14028 1251 aaPredicted RBP9.93□□□□□ -0.82
PCDH15-204ENST00000373956 UBTFP17480 764 aaKnown RBP9.93□□□□□ -0.82
PCDH15-204ENST00000373956 SLC4A1APQ9BWU0 796 aaKnown RBP9.92□□□□□ -0.82
PCDH15-204ENST00000373956 TRIM41Q8WV44 630 aa9.88□□□□□ -0.83
PCDH15-204ENST00000373956 PPARGC1BQ86YN6 1023 aaKnown RBP9.87□□□□□ -0.83
PCDH15-204ENST00000373956 RTL5Q5HYW3 569 aaPredicted RBP9.86□□□□□ -0.83
PCDH15-204ENST00000373956 CLSPNQ9HAW4 1339 aa9.85□□□□□ -0.83
PCDH15-204ENST00000373956 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.8□□□□□ -0.84
PCDH15-204ENST00000373956 ITGAEP38570 1179 aa9.8□□□□□ -0.84
PCDH15-204ENST00000373956 HNRNPUL2Q1KMD3 747 aaKnown RBP9.8□□□□□ -0.84
PCDH15-204ENST00000373956 BCL11AQ9H165 835 aa9.67□□□□□ -0.86
PCDH15-204ENST00000373956 SLC24A1O60721 1099 aa9.66□□□□□ -0.86
PCDH15-204ENST00000373956 ZBTB47Q9UFB7 747 aaPredicted RBP9.65□□□□□ -0.86
PCDH15-204ENST00000373956 BCANQ96GW7 911 aa9.6□□□□□ -0.87
PCDH15-204ENST00000373956 TRIM26Q12899 539 aaPredicted RBP9.58□□□□□ -0.88
PCDH15-204ENST00000373956 HRCP23327 699 aa9.57□□□□□ -0.88
PCDH15-204ENST00000373956 NACADO15069 1562 aa9.55□□□□□ -0.88
PCDH15-204ENST00000373956 CANXP27824 592 aaKnown RBP9.55□□□□□ -0.88
PCDH15-204ENST00000373956 TRIM52Q96A61 297 aa9.5□□□□□ -0.89
PCDH15-204ENST00000373956 CDK11AQ9UQ88 783 aaPredicted RBP9.5□□□□□ -0.89
PCDH15-204ENST00000373956 FAM50AQ14320 339 aaKnown RBP9.48□□□□□ -0.89
PCDH15-204ENST00000373956 NEUROD1Q13562 356 aa9.46□□□□□ -0.89
PCDH15-204ENST00000373956 ZNF326Q5BKZ1 582 aaKnown RBP9.46□□□□□ -0.9
PCDH15-204ENST00000373956 DIEXFQ68CQ4 756 aaKnown RBP9.45□□□□□ -0.9
PCDH15-204ENST00000373956 NPM2Q86SE8 214 aaKnown RBP9.44□□□□□ -0.9
PCDH15-204ENST00000373956 EIF5BO60841 1220 aaKnown RBP9.44□□□□□ -0.9
PCDH15-204ENST00000373956 ANP32BQ92688 251 aaKnown RBP9.42□□□□□ -0.9
PCDH15-204ENST00000373956 ABCC9O60706 1549 aa9.41□□□□□ -0.9
PCDH15-204ENST00000373956 NEFMP07197 916 aa9.4□□□□□ -0.9
PCDH15-204ENST00000373956 ANP32CO43423 234 aa9.39□□□□□ -0.91
PCDH15-204ENST00000373956 ANP32AP39687 249 aaKnown RBP9.39□□□□□ -0.91
PCDH15-204ENST00000373956 BICRAQ9NZM4 1560 aa9.38□□□□□ -0.91
PCDH15-204ENST00000373956 PEG3Q9GZU2 1588 aa9.36□□□□□ -0.91
PCDH15-204ENST00000373956 HSP90AA1P07900 732 aaKnown RBP9.35□□□□□ -0.91
PCDH15-204ENST00000373956 GTF3C3Q9Y5Q9 886 aa9.35□□□□□ -0.91
PCDH15-204ENST00000373956 UNC13AQ9UPW8 1703 aa9.34□□□□□ -0.91
PCDH15-204ENST00000373956 GLIPR1L2Q4G1C9 344 aa9.33□□□□□ -0.92
PCDH15-204ENST00000373956 LOC105371045A0A1W2PR82 267 aa9.32□□□□□ -0.92
PCDH15-204ENST00000373956 EIF4G1Q04637 1599 aaKnown RBP9.32□□□□□ -0.92
PCDH15-204ENST00000373956 CDK11BP21127 795 aaKnown RBP9.31□□□□□ -0.92
PCDH15-204ENST00000373956 ARXQ96QS3 562 aa9.3□□□□□ -0.92
PCDH15-204ENST00000373956 PLPPR3Q6T4P5 718 aa9.28□□□□□ -0.92
PCDH15-204ENST00000373956 RB1CC1Q8TDY2 1594 aa9.27□□□□□ -0.93
PCDH15-204ENST00000373956 UPF2Q9HAU5 1272 aaKnown RBP9.23□□□□□ -0.93
PCDH15-204ENST00000373956 NBR1Q14596 966 aa9.21□□□□□ -0.94
PCDH15-204ENST00000373956 FBLN2P98095 1184 aa9.21□□□□□ -0.94
PCDH15-204ENST00000373956 TULP1O00294 542 aaPredicted RBP9.19□□□□□ -0.94
PCDH15-204ENST00000373956 SCAF1Q9H7N4 1312 aaKnown RBP9.18□□□□□ -0.94
PCDH15-204ENST00000373956 A0A0G2JS52 829 aa9.18□□□□□ -0.94
PCDH15-204ENST00000373956 ARID3CA6NKF2 412 aa9.18□□□□□ -0.94
PCDH15-204ENST00000373956 STAG3Q9UJ98 1225 aa9.16□□□□□ -0.94
PCDH15-204ENST00000373956 ESF1Q9H501 851 aaKnown RBP9.15□□□□□ -0.94
PCDH15-204ENST00000373956 CHGAP10645 457 aaKnown RBP9.14□□□□□ -0.95
PCDH15-204ENST00000373956 FKBP8Q14318 412 aa9.14□□□□□ -0.95
PCDH15-204ENST00000373956 ZNF777Q9ULD5 760 aaPredicted RBP9.13□□□□□ -0.95
PCDH15-204ENST00000373956 ZBTB7CA1YPR0 619 aa9.12□□□□□ -0.95
PCDH15-204ENST00000373956 SALL2Q9Y467 1007 aaPredicted RBP9.12□□□□□ -0.95
PCDH15-204ENST00000373956 TPRNQ4KMQ1 711 aa9.1□□□□□ -0.95
PCDH15-204ENST00000373956 FAM9BQ8IZU0 186 aa9.08□□□□□ -0.96
PCDH15-204ENST00000373956 PLEKHG5O94827 1062 aa9.07□□□□□ -0.96
PCDH15-204ENST00000373956 NCLP19338 710 aaKnown RBP9.07□□□□□ -0.96
PCDH15-204ENST00000373956 MYH16Q9H6N6 1097 aa9.07□□□□□ -0.96
PCDH15-204ENST00000373956 P3H3Q8IVL6 736 aa9.06□□□□□ -0.96
PCDH15-204ENST00000373956 BAZ1AQ9NRL2 1556 aaPredicted RBP9.06□□□□□ -0.96
PCDH15-204ENST00000373956 ACIN1Q9UKV3 1341 aaKnown RBP9.05□□□□□ -0.96
PCDH15-204ENST00000373956 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.05□□□□□ -0.96
PCDH15-204ENST00000373956 TNNT2P45379 298 aaPredicted RBP9.05□□□□□ -0.96
PCDH15-204ENST00000373956 TRIM44Q96DX7 344 aaPredicted RBP9.04□□□□□ -0.96
PCDH15-204ENST00000373956 NCBP3Q53F19 620 aaKnown RBP9.04□□□□□ -0.96
PCDH15-204ENST00000373956 HNRNPUQ00839 825 aaKnown RBP eCLIP9.03□□□□□ -0.96
PCDH15-204ENST00000373956 WDR43Q15061 677 aaKnown RBP eCLIP9.03□□□□□ -0.96
PCDH15-204ENST00000373956 PTMAP06454 111 aaKnown RBP9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms