RNA–Protein interactions for RNA: ENST00000371601.4

NPDC1-202, Transcript of neural proliferation, differentiation and control 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NPDC1, Length 1,494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-202ENST00000371601 SSPOA2VEC9 5147 aa9.52□□□□□ -0.88
NPDC1-202ENST00000371601 KRTAP3-3Q9BYR6 98 aa9.49□□□□□ -0.89
NPDC1-202ENST00000371601 TRAV7A0A075B6U4 112 aa9.47□□□□□ -0.89
NPDC1-202ENST00000371601 H3BPC8 53 aa9.46□□□□□ -0.9
NPDC1-202ENST00000371601 A8MUN3 132 aa9.43□□□□□ -0.9
NPDC1-202ENST00000371601 NDUFC1O43677 76 aa9.43□□□□□ -0.9
NPDC1-202ENST00000371601 KRTAP19-1Q8IUB9 90 aa9.42□□□□□ -0.9
NPDC1-202ENST00000371601 SERP2Q8N6R1 65 aa9.34□□□□□ -0.91
NPDC1-202ENST00000371601 FCGBPQ9Y6R7 5405 aaPredicted RBP9.31□□□□□ -0.92
NPDC1-202ENST00000371601 PCP4P48539 62 aa9.3□□□□□ -0.92
NPDC1-202ENST00000371601 KRTAP19-6Q3LI70 58 aa9.26□□□□□ -0.93
NPDC1-202ENST00000371601 COX7CP15954 63 aa9.22□□□□□ -0.93
NPDC1-202ENST00000371601 C20orf197Q8N268 126 aa9.22□□□□□ -0.93
NPDC1-202ENST00000371601 DMAC1Q96GE9 116 aa9.22□□□□□ -0.93
NPDC1-202ENST00000371601 SPRR2GQ9BYE4 73 aa9.22□□□□□ -0.93
NPDC1-202ENST00000371601 SNURFQ9Y675 71 aa9.21□□□□□ -0.93
NPDC1-202ENST00000371601 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.2□□□□□ -0.94
NPDC1-202ENST00000371601 ADM2Q7Z4H4 148 aa9.19□□□□□ -0.94
NPDC1-202ENST00000371601 ANAPC13Q9BS18 74 aa9.19□□□□□ -0.94
NPDC1-202ENST00000371601 H0YAA0 97 aa9.18□□□□□ -0.94
NPDC1-202ENST00000371601 CRIPTQ9P021 101 aa9.18□□□□□ -0.94
NPDC1-202ENST00000371601 Q5VV11 94 aa9.17□□□□□ -0.94
NPDC1-202ENST00000371601 SVIPQ8NHG7 77 aa9.15□□□□□ -0.95
NPDC1-202ENST00000371601 ACYP2P14621 99 aa9.12□□□□□ -0.95
NPDC1-202ENST00000371601 KRTAP19-8Q3LI54 63 aa9.11□□□□□ -0.95
NPDC1-202ENST00000371601 MT1BP07438 61 aa9.09□□□□□ -0.95
NPDC1-202ENST00000371601 KRTAP9-7A8MTY7 169 aa9.03□□□□□ -0.96
NPDC1-202ENST00000371601 CCDC179H3BU77 68 aa9.02□□□□□ -0.96
NPDC1-202ENST00000371601 SPANXA2-OT1Q8N9U9 137 aa9.02□□□□□ -0.96
NPDC1-202ENST00000371601 CYSTM1Q9H1C7 97 aa9.02□□□□□ -0.97
NPDC1-202ENST00000371601 MACF1Q9UPN3 7388 aaKnown RBP8.99□□□□□ -0.97
NPDC1-202ENST00000371601 A6NN06 94 aa8.99□□□□□ -0.97
NPDC1-202ENST00000371601 CHKB-CPT1BH3BT56 60 aa8.98□□□□□ -0.97
NPDC1-202ENST00000371601 P0C880 135 aa8.97□□□□□ -0.97
NPDC1-202ENST00000371601 H7BZZ5 65 aa8.96□□□□□ -0.97
NPDC1-202ENST00000371601 SPTSSBQ8NFR3 76 aa8.96□□□□□ -0.97
NPDC1-202ENST00000371601 R4GN34 69 aa8.95□□□□□ -0.98
NPDC1-202ENST00000371601 KRTAP3-2Q9BYR7 98 aa8.9□□□□□ -0.98
NPDC1-202ENST00000371601 SYNE2Q8WXH0 6885 aaKnown RBP8.9□□□□□ -0.99
NPDC1-202ENST00000371601 M0QZ58 72 aa8.87□□□□□ -0.99
NPDC1-202ENST00000371601 KRTAP10-5P60370 271 aa8.86□□□□□ -0.99
NPDC1-202ENST00000371601 PLAC4Q8WY50 150 aa8.82□□□□□ -1
NPDC1-202ENST00000371601 LINC01554Q52M75 96 aa8.79□□□□□ -1
NPDC1-202ENST00000371601 COA5Q86WW8 74 aa8.74□□□□□ -1.01
NPDC1-202ENST00000371601 TMEM258P61165 79 aa8.73□□□□□ -1.01
NPDC1-202ENST00000371601 ATP5EP56381 51 aaPredicted RBP8.7□□□□□ -1.02
NPDC1-202ENST00000371601 KRTAP6-3Q3LI67 103 aa8.67□□□□□ -1.02
NPDC1-202ENST00000371601 PRO2289Q9P1D8 64 aa8.67□□□□□ -1.02
NPDC1-202ENST00000371601 MT1XP80297 61 aa8.59□□□□□ -1.03
NPDC1-202ENST00000371601 SEC61GP60059 68 aa8.54□□□□□ -1.04
NPDC1-202ENST00000371601 SERP1Q9Y6X1 66 aa8.51□□□□□ -1.05
NPDC1-202ENST00000371601 KRTAP13-4Q3LI77 160 aa8.45□□□□□ -1.06
NPDC1-202ENST00000371601 RPS28P62857 69 aaKnown RBP8.38□□□□□ -1.07
NPDC1-202ENST00000371601 KMT2DO14686 5537 aa8.38□□□□□ -1.07
NPDC1-202ENST00000371601 MUC12Q9UKN1 5478 aa8.36□□□□□ -1.07
NPDC1-202ENST00000371601 A0A1B0GU33 70 aa8.33□□□□□ -1.08
NPDC1-202ENST00000371601 KRTAP5-9P26371 169 aa8.32□□□□□ -1.08
NPDC1-202ENST00000371601 KRTAP12-2P59991 146 aa8.32□□□□□ -1.08
NPDC1-202ENST00000371601 A0A0D9SG42 100 aa8.31□□□□□ -1.08
NPDC1-202ENST00000371601 A0A1B0GU69 56 aa8.31□□□□□ -1.08
NPDC1-202ENST00000371601 SPATA8Q6RVD6 105 aa8.31□□□□□ -1.08
NPDC1-202ENST00000371601 CAMK2N1Q7Z7J9 78 aa8.28□□□□□ -1.08
NPDC1-202ENST00000371601 KRTAP8-1Q8IUC2 63 aa8.26□□□□□ -1.09
NPDC1-202ENST00000371601 NEBP20929 6669 aa8.25□□□□□ -1.09
NPDC1-202ENST00000371601 KRTAP10-7P60409 375 aaPredicted RBP8.24□□□□□ -1.09
NPDC1-202ENST00000371601 PRR15LQ9BU68 103 aa8.22□□□□□ -1.09
NPDC1-202ENST00000371601 LINC01558Q9Y6Z2 57 aa8.22□□□□□ -1.09
NPDC1-202ENST00000371601 KRTAP4-8A0A0G2JLE6 195 aa8.21□□□□□ -1.09
NPDC1-202ENST00000371601 SPRR2FQ96RM1 72 aa8.21□□□□□ -1.09
NPDC1-202ENST00000371601 KRTAP4-8Q9BYQ9 185 aa8.21□□□□□ -1.09
NPDC1-202ENST00000371601 MDN1Q9NU22 5596 aa8.19□□□□□ -1.1
NPDC1-202ENST00000371601 SPINT4Q6UDR6 99 aa8.19□□□□□ -1.1
NPDC1-202ENST00000371601 SMIM26A0A096LP01 95 aa8.17□□□□□ -1.1
NPDC1-202ENST00000371601 KRTAP10-12P60413 245 aa8.15□□□□□ -1.1
NPDC1-202ENST00000371601 Q1T7F1 81 aa8.13□□□□□ -1.11
NPDC1-202ENST00000371601 V9GYY9 64 aa8.09□□□□□ -1.11
NPDC1-202ENST00000371601 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
NPDC1-202ENST00000371601 SPRR2EP22531 72 aa8.04□□□□□ -1.12
NPDC1-202ENST00000371601 SPRR2BP35325 72 aa8.04□□□□□ -1.12
NPDC1-202ENST00000371601 SPRR2AP35326 72 aa8.04□□□□□ -1.12
NPDC1-202ENST00000371601 A8MU10 97 aa8.03□□□□□ -1.12
NPDC1-202ENST00000371601 UQCR11O14957 56 aa7.95□□□□□ -1.14
NPDC1-202ENST00000371601 KRTAP20-1Q3LI63 56 aa7.95□□□□□ -1.14
NPDC1-202ENST00000371601 PSPHP1O15172 72 aa7.94□□□□□ -1.14
NPDC1-202ENST00000371601 LCE1AQ5T7P2 110 aa7.93□□□□□ -1.14
NPDC1-202ENST00000371601 KRTAP2-3P0C7H8 128 aa7.81□□□□□ -1.16
NPDC1-202ENST00000371601 KRTAP2-4Q9BYR9 128 aa7.81□□□□□ -1.16
NPDC1-202ENST00000371601 MIR22HGQ0VDD5 57 aa7.81□□□□□ -1.16
NPDC1-202ENST00000371601 SPRR2DP22532 72 aa7.76□□□□□ -1.17
NPDC1-202ENST00000371601 A6NED7 52 aa7.73□□□□□ -1.17
NPDC1-202ENST00000371601 C10orf95Q9H7T3 257 aa7.69□□□□□ -1.18
NPDC1-202ENST00000371601 TNP1P09430 55 aa7.67□□□□□ -1.18
NPDC1-202ENST00000371601 KRTAP19-7Q3SYF9 63 aa7.67□□□□□ -1.18
NPDC1-202ENST00000371601 K7ERS5 55 aa7.6□□□□□ -1.19
NPDC1-202ENST00000371601 MT1EP04732 61 aa7.6□□□□□ -1.19
NPDC1-202ENST00000371601 KRTAP19-5Q3LI72 72 aa7.59□□□□□ -1.19
NPDC1-202ENST00000371601 KRTAP2-2Q9BYT5 123 aa7.58□□□□□ -1.2
NPDC1-202ENST00000371601 KRTAP2-1Q9BYU5 128 aa7.58□□□□□ -1.2
NPDC1-202ENST00000371601 BRK1Q8WUW1 75 aa7.57□□□□□ -1.2
NPDC1-202ENST00000371601 CDC42SE1Q9NRR8 79 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 103.1 ms