RNA–Protein interactions for RNA: ENST00000371242.6

RAE1-201, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAE1, Length 2,362 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-201ENST00000371242 LCA10Q71F78 164 aa5.93□□□□□ -1.46
RAE1-201ENST00000371242 PCLOQ9Y6V0 5065 aa5.93□□□□□ -1.46
RAE1-201ENST00000371242 CDC42SE1Q9NRR8 79 aa5.92□□□□□ -1.46
RAE1-201ENST00000371242 DMBT1Q9UGM3 2413 aaPredicted RBP5.92□□□□□ -1.46
RAE1-201ENST00000371242 A0A1B0GU69 56 aa5.92□□□□□ -1.46
RAE1-201ENST00000371242 MT1HL1P0DM35 61 aa5.91□□□□□ -1.46
RAE1-201ENST00000371242 LCE2CQ5TA81 110 aa5.9□□□□□ -1.46
RAE1-201ENST00000371242 KRTAP3-1Q9BYR8 98 aa5.89□□□□□ -1.47
RAE1-201ENST00000371242 H3BS24 57 aa5.88□□□□□ -1.47
RAE1-201ENST00000371242 RPL37P61927 97 aaKnown RBP5.88□□□□□ -1.47
RAE1-201ENST00000371242 XP32Q5T750 250 aa5.86□□□□□ -1.47
RAE1-201ENST00000371242 COX6B2Q6YFQ2 88 aa5.85□□□□□ -1.47
RAE1-201ENST00000371242 LCE2AQ5TA79 106 aaPredicted RBP5.81□□□□□ -1.48
RAE1-201ENST00000371242 HERC1Q15751 4861 aa5.81□□□□□ -1.48
RAE1-201ENST00000371242 UQCR11O14957 56 aa5.79□□□□□ -1.48
RAE1-201ENST00000371242 SPATA8Q6RVD6 105 aa5.78□□□□□ -1.48
RAE1-201ENST00000371242 LPAP08519 4548 aa5.76□□□□□ -1.49
RAE1-201ENST00000371242 MIR22HGQ0VDD5 57 aa5.75□□□□□ -1.49
RAE1-201ENST00000371242 TPRXLQ17RH7 258 aa5.75□□□□□ -1.49
RAE1-201ENST00000371242 PRAC1Q96KF2 57 aa5.73□□□□□ -1.49
RAE1-201ENST00000371242 LRP2P98164 4655 aa5.71□□□□□ -1.5
RAE1-201ENST00000371242 LINC01554Q52M75 96 aa5.71□□□□□ -1.5
RAE1-201ENST00000371242 ADM2Q7Z4H4 148 aa5.67□□□□□ -1.5
RAE1-201ENST00000371242 LORP23490 312 aaPredicted RBP5.66□□□□□ -1.5
RAE1-201ENST00000371242 A0A1B0GU33 70 aa5.65□□□□□ -1.51
RAE1-201ENST00000371242 S4R3F8 94 aa5.64□□□□□ -1.51
RAE1-201ENST00000371242 H1FX-AS1Q4G0G2 97 aa5.63□□□□□ -1.51
RAE1-201ENST00000371242 HMCN2Q8NDA2 5059 aa5.63□□□□□ -1.51
RAE1-201ENST00000371242 H0YAA0 97 aa5.63□□□□□ -1.51
RAE1-201ENST00000371242 KRTAP10-6P60371 365 aaPredicted RBP5.56□□□□□ -1.52
RAE1-201ENST00000371242 SEC61BP60468 96 aaKnown RBP5.52□□□□□ -1.53
RAE1-201ENST00000371242 MUC2Q02817 5179 aa5.52□□□□□ -1.53
RAE1-201ENST00000371242 MUC17Q685J3 4493 aa5.52□□□□□ -1.53
RAE1-201ENST00000371242 UBR4Q5T4S7 5183 aa5.48□□□□□ -1.53
RAE1-201ENST00000371242 CSAG1Q6PB30 78 aa5.48□□□□□ -1.53
RAE1-201ENST00000371242 P0C880 135 aa5.45□□□□□ -1.54
RAE1-201ENST00000371242 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
RAE1-201ENST00000371242 RNF213Q63HN8 5207 aa5.43□□□□□ -1.54
RAE1-201ENST00000371242 K7ERS5 55 aa5.42□□□□□ -1.54
RAE1-201ENST00000371242 KRTAP4-1Q9BYQ7 146 aa5.41□□□□□ -1.54
RAE1-201ENST00000371242 A0A0D9SG42 100 aa5.36□□□□□ -1.55
RAE1-201ENST00000371242 ROMO1P60602 79 aa5.34□□□□□ -1.56
RAE1-201ENST00000371242 KRTAP19-2Q3LHN2 52 aa5.33□□□□□ -1.56
RAE1-201ENST00000371242 M0QZ58 72 aa5.33□□□□□ -1.56
RAE1-201ENST00000371242 FAT4Q6V0I7 4981 aa5.27□□□□□ -1.57
RAE1-201ENST00000371242 KRTAP25-1Q3LHN0 102 aa5.27□□□□□ -1.57
RAE1-201ENST00000371242 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
RAE1-201ENST00000371242 KRTAP12-1P59990 96 aa5.25□□□□□ -1.57
RAE1-201ENST00000371242 A0A0A0MQY5 61 aa5.22□□□□□ -1.57
RAE1-201ENST00000371242 R4GN34 69 aa5.22□□□□□ -1.57
RAE1-201ENST00000371242 SPINT4Q6UDR6 99 aa5.21□□□□□ -1.57
RAE1-201ENST00000371242 FLGP20930 4061 aaPredicted RBP5.2□□□□□ -1.58
RAE1-201ENST00000371242 CRIPTQ9P021 101 aa5.14□□□□□ -1.59
RAE1-201ENST00000371242 C10orf95Q9H7T3 257 aa5.02□□□□□ -1.61
RAE1-201ENST00000371242 NDUFAF8A1L188 74 aa5□□□□□ -1.61
RAE1-201ENST00000371242 MT1HP80294 61 aa4.95□□□□□ -1.62
RAE1-201ENST00000371242 KRTAP15-1Q3LI76 137 aa4.94□□□□□ -1.62
RAE1-201ENST00000371242 M0R2T5 61 aa4.92□□□□□ -1.62
RAE1-201ENST00000371242 CAMK2N1Q7Z7J9 78 aa4.92□□□□□ -1.62
RAE1-201ENST00000371242 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
RAE1-201ENST00000371242 KRTAP19-1Q8IUB9 90 aa4.84□□□□□ -1.63
RAE1-201ENST00000371242 MT2AP02795 61 aa4.82□□□□□ -1.64
RAE1-201ENST00000371242 KRTAP9-8Q9BYQ0 159 aa4.82□□□□□ -1.64
RAE1-201ENST00000371242 MT1FP04733 61 aa4.8□□□□□ -1.64
RAE1-201ENST00000371242 KRTAP10-10P60014 251 aa4.79□□□□□ -1.64
RAE1-201ENST00000371242 PLAC4Q8WY50 150 aa4.77□□□□□ -1.65
RAE1-201ENST00000371242 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
RAE1-201ENST00000371242 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
RAE1-201ENST00000371242 TNP1P09430 55 aa4.73□□□□□ -1.65
RAE1-201ENST00000371242 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
RAE1-201ENST00000371242 KRTAP23-1A1A580 65 aa4.68□□□□□ -1.66
RAE1-201ENST00000371242 USH2AO75445 5202 aa4.63□□□□□ -1.67
RAE1-201ENST00000371242 MT1BP07438 61 aa4.62□□□□□ -1.67
RAE1-201ENST00000371242 KRTAP9-3Q9BYQ3 159 aa4.62□□□□□ -1.67
RAE1-201ENST00000371242 FSIP2Q5CZC0 6907 aa4.58□□□□□ -1.68
RAE1-201ENST00000371242 KRTAP10-5P60370 271 aa4.54□□□□□ -1.68
RAE1-201ENST00000371242 MT1XP80297 61 aa4.54□□□□□ -1.68
RAE1-201ENST00000371242 LCE3AQ5TA76 89 aa4.48□□□□□ -1.69
RAE1-201ENST00000371242 SSPOA2VEC9 5147 aa4.44□□□□□ -1.7
RAE1-201ENST00000371242 PRO2289Q9P1D8 64 aa4.43□□□□□ -1.7
RAE1-201ENST00000371242 KRTAP8-1Q8IUC2 63 aa4.41□□□□□ -1.7
RAE1-201ENST00000371242 KRTAP10-12P60413 245 aa4.39□□□□□ -1.71
RAE1-201ENST00000371242 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
RAE1-201ENST00000371242 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
RAE1-201ENST00000371242 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
RAE1-201ENST00000371242 KRTAP12-3P60328 96 aa4.29□□□□□ -1.72
RAE1-201ENST00000371242 KRTAP9-2Q9BYQ4 174 aa4.28□□□□□ -1.72
RAE1-201ENST00000371242 KMT2DO14686 5537 aa4.25□□□□□ -1.73
RAE1-201ENST00000371242 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
RAE1-201ENST00000371242 LOC100996750A0A140TA64 210 aa4.16□□□□□ -1.74
RAE1-201ENST00000371242 KRTAP19-6Q3LI70 58 aa4.16□□□□□ -1.74
RAE1-201ENST00000371242 KRTAP19-5Q3LI72 72 aa4.16□□□□□ -1.74
RAE1-201ENST00000371242 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
RAE1-201ENST00000371242 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
RAE1-201ENST00000371242 KRTAP4-8A0A0G2JLE6 195 aa4.14□□□□□ -1.75
RAE1-201ENST00000371242 KRTAP4-8Q9BYQ9 185 aa4.14□□□□□ -1.75
RAE1-201ENST00000371242 KRTAP9-6A0A140TA67 174 aa4.12□□□□□ -1.75
RAE1-201ENST00000371242 KRTAP9-7A8MTY7 169 aa4.12□□□□□ -1.75
RAE1-201ENST00000371242 MACF1Q9UPN3 7388 aaKnown RBP4.1□□□□□ -1.75
RAE1-201ENST00000371242 CRCT1Q9UGL9 99 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms