RNA–Protein interactions for RNA: ENST00000369660.8

UBL4A-202, Transcript of ubiquitin like 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL4A, Length 2,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4A-202ENST00000369660 RNF213Q63HN8 5207 aa9.6□□□□□ -0.87
UBL4A-202ENST00000369660 LCA10Q71F78 164 aa9.58□□□□□ -0.88
UBL4A-202ENST00000369660 PRR15LQ9BU68 103 aa9.58□□□□□ -0.88
UBL4A-202ENST00000369660 H1FX-AS1Q4G0G2 97 aa9.53□□□□□ -0.88
UBL4A-202ENST00000369660 S4R3F8 94 aa9.52□□□□□ -0.88
UBL4A-202ENST00000369660 KRTAP3-3Q9BYR6 98 aa9.51□□□□□ -0.89
UBL4A-202ENST00000369660 LINC01558Q9Y6Z2 57 aa9.51□□□□□ -0.89
UBL4A-202ENST00000369660 V9GYY9 64 aa9.51□□□□□ -0.89
UBL4A-202ENST00000369660 Q5VV11 94 aa9.46□□□□□ -0.89
UBL4A-202ENST00000369660 SPTSSBQ8NFR3 76 aa9.44□□□□□ -0.9
UBL4A-202ENST00000369660 A0A1B0GU69 56 aa9.44□□□□□ -0.9
UBL4A-202ENST00000369660 FAT4Q6V0I7 4981 aa9.4□□□□□ -0.9
UBL4A-202ENST00000369660 KRTAP19-2Q3LHN2 52 aa9.39□□□□□ -0.91
UBL4A-202ENST00000369660 SEC61GP60059 68 aa9.31□□□□□ -0.92
UBL4A-202ENST00000369660 A6NED7 52 aa9.29□□□□□ -0.92
UBL4A-202ENST00000369660 A8MU10 97 aa9.29□□□□□ -0.92
UBL4A-202ENST00000369660 BRK1Q8WUW1 75 aa9.29□□□□□ -0.92
UBL4A-202ENST00000369660 FLGP20930 4061 aaPredicted RBP9.27□□□□□ -0.93
UBL4A-202ENST00000369660 CSAG1Q6PB30 78 aa9.27□□□□□ -0.93
UBL4A-202ENST00000369660 LCE2CQ5TA81 110 aa9.18□□□□□ -0.94
UBL4A-202ENST00000369660 ADM2Q7Z4H4 148 aa9.18□□□□□ -0.94
UBL4A-202ENST00000369660 P0C880 135 aa9.17□□□□□ -0.94
UBL4A-202ENST00000369660 KRTAP3-2Q9BYR7 98 aa9.17□□□□□ -0.94
UBL4A-202ENST00000369660 KRTAP10-6P60371 365 aaPredicted RBP9.16□□□□□ -0.94
UBL4A-202ENST00000369660 A0A1B0GU33 70 aa9.12□□□□□ -0.95
UBL4A-202ENST00000369660 UQCR11O14957 56 aa9.11□□□□□ -0.95
UBL4A-202ENST00000369660 SPATA8Q6RVD6 105 aa9.11□□□□□ -0.95
UBL4A-202ENST00000369660 MIR22HGQ0VDD5 57 aa9.06□□□□□ -0.96
UBL4A-202ENST00000369660 H0YAA0 97 aa9.04□□□□□ -0.96
UBL4A-202ENST00000369660 M0R2T5 61 aa9.02□□□□□ -0.96
UBL4A-202ENST00000369660 CDC42SE1Q9NRR8 79 aa9.02□□□□□ -0.96
UBL4A-202ENST00000369660 KRTAP13-4Q3LI77 160 aa9.01□□□□□ -0.97
UBL4A-202ENST00000369660 MT1HP80294 61 aa9.01□□□□□ -0.97
UBL4A-202ENST00000369660 LORP23490 312 aaPredicted RBP8.96□□□□□ -0.98
UBL4A-202ENST00000369660 PRO0628Q9UI54 55 aa8.96□□□□□ -0.98
UBL4A-202ENST00000369660 A0A0D9SG42 100 aa8.93□□□□□ -0.98
UBL4A-202ENST00000369660 M0QZ58 72 aa8.84□□□□□ -0.99
UBL4A-202ENST00000369660 LINC01554Q52M75 96 aa8.83□□□□□ -1
UBL4A-202ENST00000369660 R4GN34 69 aa8.83□□□□□ -1
UBL4A-202ENST00000369660 PMAIP1Q13794 54 aa8.73□□□□□ -1.01
UBL4A-202ENST00000369660 KRTAP9-8Q9BYQ0 159 aa8.67□□□□□ -1.02
UBL4A-202ENST00000369660 SPINT4Q6UDR6 99 aa8.66□□□□□ -1.02
UBL4A-202ENST00000369660 MT2AP02795 61 aa8.66□□□□□ -1.02
UBL4A-202ENST00000369660 MT1FP04733 61 aa8.65□□□□□ -1.02
UBL4A-202ENST00000369660 KRTAP12-2P59991 146 aa8.65□□□□□ -1.02
UBL4A-202ENST00000369660 KRTAP10-10P60014 251 aa8.65□□□□□ -1.02
UBL4A-202ENST00000369660 A6NN06 94 aa8.61□□□□□ -1.03
UBL4A-202ENST00000369660 KRTAP12-1P59990 96 aa8.59□□□□□ -1.03
UBL4A-202ENST00000369660 K7ERS5 55 aa8.55□□□□□ -1.04
UBL4A-202ENST00000369660 LCE2AQ5TA79 106 aaPredicted RBP8.55□□□□□ -1.04
UBL4A-202ENST00000369660 CRIPTQ9P021 101 aa8.49□□□□□ -1.05
UBL4A-202ENST00000369660 KRTAP19-1Q8IUB9 90 aa8.49□□□□□ -1.05
UBL4A-202ENST00000369660 SPRR2GQ9BYE4 73 aa8.42□□□□□ -1.06
UBL4A-202ENST00000369660 KRTAP9-3Q9BYQ3 159 aa8.33□□□□□ -1.08
UBL4A-202ENST00000369660 KTN1-AS1Q86SY8 53 aa8.3□□□□□ -1.08
UBL4A-202ENST00000369660 PRAC1Q96KF2 57 aa8.3□□□□□ -1.08
UBL4A-202ENST00000369660 CAMK2N1Q7Z7J9 78 aa8.29□□□□□ -1.08
UBL4A-202ENST00000369660 USH2AO75445 5202 aa8.25□□□□□ -1.09
UBL4A-202ENST00000369660 ROMO1P60602 79 aa8.25□□□□□ -1.09
UBL4A-202ENST00000369660 PLAC4Q8WY50 150 aa8.21□□□□□ -1.09
UBL4A-202ENST00000369660 LCE2BO14633 110 aa8.17□□□□□ -1.1
UBL4A-202ENST00000369660 MT1BP07438 61 aa8.16□□□□□ -1.1
UBL4A-202ENST00000369660 KRTAP19-8Q3LI54 63 aa8.15□□□□□ -1.1
UBL4A-202ENST00000369660 C10orf95Q9H7T3 257 aa8.15□□□□□ -1.1
UBL4A-202ENST00000369660 FSIP2Q5CZC0 6907 aa8.1□□□□□ -1.11
UBL4A-202ENST00000369660 MT1XP80297 61 aa7.92□□□□□ -1.14
UBL4A-202ENST00000369660 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
UBL4A-202ENST00000369660 KRTAP10-5P60370 271 aa7.91□□□□□ -1.14
UBL4A-202ENST00000369660 TNP1P09430 55 aa7.81□□□□□ -1.16
UBL4A-202ENST00000369660 SSPOA2VEC9 5147 aa7.79□□□□□ -1.16
UBL4A-202ENST00000369660 PRO2289Q9P1D8 64 aa7.71□□□□□ -1.17
UBL4A-202ENST00000369660 KMT2DO14686 5537 aa7.69□□□□□ -1.18
UBL4A-202ENST00000369660 KRTAP10-7P60409 375 aaPredicted RBP7.69□□□□□ -1.18
UBL4A-202ENST00000369660 LCE2DQ5TA82 110 aaPredicted RBP7.62□□□□□ -1.19
UBL4A-202ENST00000369660 LCE3AQ5TA76 89 aa7.58□□□□□ -1.2
UBL4A-202ENST00000369660 KRTAP10-12P60413 245 aa7.53□□□□□ -1.2
UBL4A-202ENST00000369660 KRTAP19-6Q3LI70 58 aa7.5□□□□□ -1.21
UBL4A-202ENST00000369660 PP632Q6XCG6 107 aa7.49□□□□□ -1.21
UBL4A-202ENST00000369660 KRTAP9-2Q9BYQ4 174 aa7.48□□□□□ -1.21
UBL4A-202ENST00000369660 FCGBPQ9Y6R7 5405 aaPredicted RBP7.45□□□□□ -1.22
UBL4A-202ENST00000369660 KRTAP4-8A0A0G2JLE6 195 aa7.44□□□□□ -1.22
UBL4A-202ENST00000369660 KRTAP4-8Q9BYQ9 185 aa7.44□□□□□ -1.22
UBL4A-202ENST00000369660 KRTAP23-1A1A580 65 aa7.38□□□□□ -1.23
UBL4A-202ENST00000369660 KRTAP8-1Q8IUC2 63 aa7.27□□□□□ -1.24
UBL4A-202ENST00000369660 KRTAP12-3P60328 96 aa7.22□□□□□ -1.25
UBL4A-202ENST00000369660 KRTAP19-5Q3LI72 72 aa7.22□□□□□ -1.25
UBL4A-202ENST00000369660 MACF1Q9UPN3 7388 aaKnown RBP7.2□□□□□ -1.26
UBL4A-202ENST00000369660 H3BS24 57 aa7.2□□□□□ -1.26
UBL4A-202ENST00000369660 CRCT1Q9UGL9 99 aa7.19□□□□□ -1.26
UBL4A-202ENST00000369660 SYNE2Q8WXH0 6885 aaKnown RBP7.08□□□□□ -1.28
UBL4A-202ENST00000369660 KRTAP19-7Q3SYF9 63 aa7.06□□□□□ -1.28
UBL4A-202ENST00000369660 KRTAP15-1Q3LI76 137 aa7.05□□□□□ -1.28
UBL4A-202ENST00000369660 MUC12Q9UKN1 5478 aa7.02□□□□□ -1.29
UBL4A-202ENST00000369660 MT1EP04732 61 aa6.91□□□□□ -1.3
UBL4A-202ENST00000369660 SPRR2FQ96RM1 72 aa6.83□□□□□ -1.32
UBL4A-202ENST00000369660 KRTAP9-6A0A140TA67 174 aa6.81□□□□□ -1.32
UBL4A-202ENST00000369660 KRTAP4-7Q9BYR0 210 aa6.79□□□□□ -1.32
UBL4A-202ENST00000369660 MT1LQ93083 61 aa6.79□□□□□ -1.32
UBL4A-202ENST00000369660 MDN1Q9NU22 5596 aa6.74□□□□□ -1.33
UBL4A-202ENST00000369660 LCE3CQ5T5A8 94 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms