RNA–Protein interactions for RNA: ENST00000369509.1

VANGL1-203, Transcript of VANGL planar cell polarity protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VANGL1, Length 2,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VANGL1-203ENST00000369509 A8MUU9 505 aa6.02□□□□□ -1.45
VANGL1-203ENST00000369509 SPTSSBQ8NFR3 76 aa6.02□□□□□ -1.45
VANGL1-203ENST00000369509 CDC42SE1Q9NRR8 79 aa6.02□□□□□ -1.45
VANGL1-203ENST00000369509 IGKV2D-30A0A075B6S6 120 aa6□□□□□ -1.45
VANGL1-203ENST00000369509 A8MU10 97 aa6□□□□□ -1.45
VANGL1-203ENST00000369509 J3QL48 77 aa6□□□□□ -1.45
VANGL1-203ENST00000369509 LINC01554Q52M75 96 aa5.99□□□□□ -1.45
VANGL1-203ENST00000369509 LPAP08519 4548 aa5.97□□□□□ -1.45
VANGL1-203ENST00000369509 XP32Q5T750 250 aa5.96□□□□□ -1.46
VANGL1-203ENST00000369509 TPRXLQ17RH7 258 aa5.95□□□□□ -1.46
VANGL1-203ENST00000369509 LCE2BO14633 110 aa5.95□□□□□ -1.46
VANGL1-203ENST00000369509 LRP2P98164 4655 aa5.93□□□□□ -1.46
VANGL1-203ENST00000369509 A0A1B0GU69 56 aa5.93□□□□□ -1.46
VANGL1-203ENST00000369509 SPINK7P58062 85 aa5.93□□□□□ -1.46
VANGL1-203ENST00000369509 RPL37P61927 97 aaKnown RBP5.92□□□□□ -1.46
VANGL1-203ENST00000369509 HERC1Q15751 4861 aa5.91□□□□□ -1.46
VANGL1-203ENST00000369509 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
VANGL1-203ENST00000369509 UQCR11O14957 56 aa5.81□□□□□ -1.48
VANGL1-203ENST00000369509 SPATA8Q6RVD6 105 aa5.79□□□□□ -1.48
VANGL1-203ENST00000369509 MUC17Q685J3 4493 aa5.79□□□□□ -1.48
VANGL1-203ENST00000369509 MIR22HGQ0VDD5 57 aa5.78□□□□□ -1.48
VANGL1-203ENST00000369509 LCE2AQ5TA79 106 aaPredicted RBP5.77□□□□□ -1.49
VANGL1-203ENST00000369509 PRAC1Q96KF2 57 aa5.75□□□□□ -1.49
VANGL1-203ENST00000369509 SEC61BP60468 96 aaKnown RBP5.71□□□□□ -1.5
VANGL1-203ENST00000369509 A0A0A0MQY5 61 aa5.68□□□□□ -1.5
VANGL1-203ENST00000369509 KRTAP3-1Q9BYR8 98 aa5.68□□□□□ -1.5
VANGL1-203ENST00000369509 COX6B2Q6YFQ2 88 aa5.68□□□□□ -1.5
VANGL1-203ENST00000369509 KRTAP4-1Q9BYQ7 146 aa5.66□□□□□ -1.5
VANGL1-203ENST00000369509 ADM2Q7Z4H4 148 aa5.65□□□□□ -1.5
VANGL1-203ENST00000369509 A0A1B0GU33 70 aa5.6□□□□□ -1.51
VANGL1-203ENST00000369509 MUC2Q02817 5179 aa5.59□□□□□ -1.51
VANGL1-203ENST00000369509 H1FX-AS1Q4G0G2 97 aa5.59□□□□□ -1.52
VANGL1-203ENST00000369509 ROMO1P60602 79 aa5.58□□□□□ -1.52
VANGL1-203ENST00000369509 UBR4Q5T4S7 5183 aa5.57□□□□□ -1.52
VANGL1-203ENST00000369509 CSAG1Q6PB30 78 aa5.57□□□□□ -1.52
VANGL1-203ENST00000369509 H0YAA0 97 aa5.55□□□□□ -1.52
VANGL1-203ENST00000369509 KRTAP19-2Q3LHN2 52 aa5.54□□□□□ -1.52
VANGL1-203ENST00000369509 RNF213Q63HN8 5207 aa5.52□□□□□ -1.53
VANGL1-203ENST00000369509 K7ERS5 55 aa5.49□□□□□ -1.53
VANGL1-203ENST00000369509 S4R3F8 94 aa5.49□□□□□ -1.53
VANGL1-203ENST00000369509 FLGP20930 4061 aaPredicted RBP5.46□□□□□ -1.54
VANGL1-203ENST00000369509 KRTAP4-8Q9BYQ9 185 aa5.42□□□□□ -1.54
VANGL1-203ENST00000369509 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
VANGL1-203ENST00000369509 KRTAP10-6P60371 365 aaPredicted RBP5.39□□□□□ -1.55
VANGL1-203ENST00000369509 LCE2CQ5TA81 110 aa5.39□□□□□ -1.55
VANGL1-203ENST00000369509 FAT4Q6V0I7 4981 aa5.38□□□□□ -1.55
VANGL1-203ENST00000369509 P0C880 135 aa5.36□□□□□ -1.55
VANGL1-203ENST00000369509 LORP23490 312 aaPredicted RBP5.32□□□□□ -1.56
VANGL1-203ENST00000369509 A0A0D9SG42 100 aa5.31□□□□□ -1.56
VANGL1-203ENST00000369509 KRTAP13-4Q3LI77 160 aa5.3□□□□□ -1.56
VANGL1-203ENST00000369509 MT1HP80294 61 aa5.26□□□□□ -1.57
VANGL1-203ENST00000369509 KRTAP9-2Q9BYQ4 174 aa5.25□□□□□ -1.57
VANGL1-203ENST00000369509 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.24□□□□□ -1.57
VANGL1-203ENST00000369509 KRTAP9-6A0A140TA67 174 aa5.23□□□□□ -1.57
VANGL1-203ENST00000369509 M0QZ58 72 aa5.22□□□□□ -1.57
VANGL1-203ENST00000369509 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
VANGL1-203ENST00000369509 SPINT4Q6UDR6 99 aa5.16□□□□□ -1.58
VANGL1-203ENST00000369509 CRIPTQ9P021 101 aa5.16□□□□□ -1.58
VANGL1-203ENST00000369509 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
VANGL1-203ENST00000369509 KRTAP12-2P59991 146 aa5.16□□□□□ -1.58
VANGL1-203ENST00000369509 M0R2T5 61 aa5.14□□□□□ -1.59
VANGL1-203ENST00000369509 KRTAP12-1P59990 96 aa5.14□□□□□ -1.59
VANGL1-203ENST00000369509 LUZP6Q538Z0 58 aa5.13□□□□□ -1.59
VANGL1-203ENST00000369509 KRTAP15-1Q3LI76 137 aa5.09□□□□□ -1.59
VANGL1-203ENST00000369509 R4GN34 69 aa5.09□□□□□ -1.59
VANGL1-203ENST00000369509 KRTAP9-8Q9BYQ0 159 aa5.08□□□□□ -1.6
VANGL1-203ENST00000369509 MT2AP02795 61 aa5.05□□□□□ -1.6
VANGL1-203ENST00000369509 KRTAP4-8A0A0G2JLE6 195 aa5.04□□□□□ -1.6
VANGL1-203ENST00000369509 MT1FP04733 61 aa5.03□□□□□ -1.6
VANGL1-203ENST00000369509 KRTAP4-12Q9BQ66 201 aa5.02□□□□□ -1.61
VANGL1-203ENST00000369509 C10orf95Q9H7T3 257 aa5.01□□□□□ -1.61
VANGL1-203ENST00000369509 KRTAP9-9Q9BYP9 154 aa4.98□□□□□ -1.61
VANGL1-203ENST00000369509 KRTAP9-4Q9BYQ2 154 aa4.98□□□□□ -1.61
VANGL1-203ENST00000369509 KRTAP10-10P60014 251 aa4.96□□□□□ -1.61
VANGL1-203ENST00000369509 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
VANGL1-203ENST00000369509 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
VANGL1-203ENST00000369509 KRTAP4-7Q9BYR0 210 aa4.92□□□□□ -1.62
VANGL1-203ENST00000369509 KRTAP9-3Q9BYQ3 159 aa4.89□□□□□ -1.63
VANGL1-203ENST00000369509 LCE1DQ5T752 114 aa4.84□□□□□ -1.63
VANGL1-203ENST00000369509 CAMK2N1Q7Z7J9 78 aa4.84□□□□□ -1.64
VANGL1-203ENST00000369509 KRTAP19-8Q3LI54 63 aa4.82□□□□□ -1.64
VANGL1-203ENST00000369509 MT1BP07438 61 aa4.77□□□□□ -1.65
VANGL1-203ENST00000369509 PP632Q6XCG6 107 aa4.76□□□□□ -1.65
VANGL1-203ENST00000369509 KRTAP4-9Q9BYQ8 210 aa4.73□□□□□ -1.65
VANGL1-203ENST00000369509 PLAC4Q8WY50 150 aa4.71□□□□□ -1.65
VANGL1-203ENST00000369509 USH2AO75445 5202 aa4.69□□□□□ -1.66
VANGL1-203ENST00000369509 TNP1P09430 55 aa4.66□□□□□ -1.66
VANGL1-203ENST00000369509 KRTAP4-2Q9BYR5 136 aa4.65□□□□□ -1.67
VANGL1-203ENST00000369509 KRTAP23-1A1A580 65 aa4.61□□□□□ -1.67
VANGL1-203ENST00000369509 MT1XP80297 61 aa4.61□□□□□ -1.67
VANGL1-203ENST00000369509 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
VANGL1-203ENST00000369509 SSPOA2VEC9 5147 aa4.55□□□□□ -1.68
VANGL1-203ENST00000369509 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
VANGL1-203ENST00000369509 KRTAP4-11Q9BYQ6 195 aa4.48□□□□□ -1.69
VANGL1-203ENST00000369509 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.7
VANGL1-203ENST00000369509 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
VANGL1-203ENST00000369509 KRTAP10-7P60409 375 aaPredicted RBP4.42□□□□□ -1.7
VANGL1-203ENST00000369509 KRTAP5-3Q6L8H2 238 aa4.42□□□□□ -1.7
VANGL1-203ENST00000369509 KRTAP10-12P60413 245 aa4.36□□□□□ -1.71
VANGL1-203ENST00000369509 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms