RNA–Protein interactions for RNA: ENST00000369442.3

GDAP2-201, Transcript of ganglioside induced differentiation associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene GDAP2, Length 2,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDAP2-201ENST00000369442 LCA10Q71F78 164 aa7.09□□□□□ -1.27
GDAP2-201ENST00000369442 PCLOQ9Y6V0 5065 aa7.01□□□□□ -1.29
GDAP2-201ENST00000369442 SPTSSBQ8NFR3 76 aa7□□□□□ -1.29
GDAP2-201ENST00000369442 LCE2DQ5TA82 110 aaPredicted RBP6.98□□□□□ -1.29
GDAP2-201ENST00000369442 KRTAP3-3Q9BYR6 98 aa6.97□□□□□ -1.29
GDAP2-201ENST00000369442 CDC42SE1Q9NRR8 79 aa6.97□□□□□ -1.29
GDAP2-201ENST00000369442 HERC1Q15751 4861 aa6.97□□□□□ -1.29
GDAP2-201ENST00000369442 S4R3F8 94 aa6.93□□□□□ -1.3
GDAP2-201ENST00000369442 SEC61GP60059 68 aa6.93□□□□□ -1.3
GDAP2-201ENST00000369442 KRTAP4-1Q9BYQ7 146 aa6.93□□□□□ -1.3
GDAP2-201ENST00000369442 MUC17Q685J3 4493 aa6.91□□□□□ -1.3
GDAP2-201ENST00000369442 UQCR11O14957 56 aa6.89□□□□□ -1.31
GDAP2-201ENST00000369442 MIR22HGQ0VDD5 57 aa6.88□□□□□ -1.31
GDAP2-201ENST00000369442 MUC2Q02817 5179 aa6.88□□□□□ -1.31
GDAP2-201ENST00000369442 H1FX-AS1Q4G0G2 97 aa6.88□□□□□ -1.31
GDAP2-201ENST00000369442 RBM12B-AS1Q9P1G2 102 aa6.86□□□□□ -1.31
GDAP2-201ENST00000369442 SEC61BP60468 96 aaKnown RBP6.85□□□□□ -1.31
GDAP2-201ENST00000369442 PMAIP1Q13794 54 aa6.85□□□□□ -1.31
GDAP2-201ENST00000369442 SPATA8Q6RVD6 105 aa6.84□□□□□ -1.31
GDAP2-201ENST00000369442 H0YAA0 97 aa6.82□□□□□ -1.32
GDAP2-201ENST00000369442 A0A1B0GU33 70 aa6.81□□□□□ -1.32
GDAP2-201ENST00000369442 HMCN2Q8NDA2 5059 aa6.8□□□□□ -1.32
GDAP2-201ENST00000369442 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
GDAP2-201ENST00000369442 KRTAP3-2Q9BYR7 98 aa6.78□□□□□ -1.32
GDAP2-201ENST00000369442 P0C880 135 aa6.77□□□□□ -1.33
GDAP2-201ENST00000369442 A6NN06 94 aa6.76□□□□□ -1.33
GDAP2-201ENST00000369442 KRTAP13-4Q3LI77 160 aa6.73□□□□□ -1.33
GDAP2-201ENST00000369442 ADM2Q7Z4H4 148 aa6.72□□□□□ -1.33
GDAP2-201ENST00000369442 CSAG1Q6PB30 78 aa6.69□□□□□ -1.34
GDAP2-201ENST00000369442 KRTAP19-2Q3LHN2 52 aa6.67□□□□□ -1.34
GDAP2-201ENST00000369442 A0A0D9SG42 100 aa6.66□□□□□ -1.34
GDAP2-201ENST00000369442 UBR4Q5T4S7 5183 aa6.59□□□□□ -1.35
GDAP2-201ENST00000369442 KTN1-AS1Q86SY8 53 aa6.58□□□□□ -1.36
GDAP2-201ENST00000369442 RNF213Q63HN8 5207 aa6.58□□□□□ -1.36
GDAP2-201ENST00000369442 FLGP20930 4061 aaPredicted RBP6.55□□□□□ -1.36
GDAP2-201ENST00000369442 PRAC1Q96KF2 57 aa6.55□□□□□ -1.36
GDAP2-201ENST00000369442 FAT4Q6V0I7 4981 aa6.54□□□□□ -1.36
GDAP2-201ENST00000369442 LORP23490 312 aaPredicted RBP6.54□□□□□ -1.36
GDAP2-201ENST00000369442 LINC01554Q52M75 96 aa6.46□□□□□ -1.38
GDAP2-201ENST00000369442 KRTAP12-2P59991 146 aa6.46□□□□□ -1.38
GDAP2-201ENST00000369442 M0QZ58 72 aa6.45□□□□□ -1.38
GDAP2-201ENST00000369442 LCE2CQ5TA81 110 aa6.44□□□□□ -1.38
GDAP2-201ENST00000369442 SPINT4Q6UDR6 99 aa6.44□□□□□ -1.38
GDAP2-201ENST00000369442 K7ERS5 55 aa6.41□□□□□ -1.38
GDAP2-201ENST00000369442 R4GN34 69 aa6.41□□□□□ -1.38
GDAP2-201ENST00000369442 KRTAP12-1P59990 96 aa6.39□□□□□ -1.39
GDAP2-201ENST00000369442 CRIPTQ9P021 101 aa6.37□□□□□ -1.39
GDAP2-201ENST00000369442 M0R2T5 61 aa6.3□□□□□ -1.4
GDAP2-201ENST00000369442 MT1HP80294 61 aa6.29□□□□□ -1.4
GDAP2-201ENST00000369442 ROMO1P60602 79 aa6.27□□□□□ -1.41
GDAP2-201ENST00000369442 C10orf95Q9H7T3 257 aa6.18□□□□□ -1.42
GDAP2-201ENST00000369442 KRTAP25-1Q3LHN0 102 aa6.16□□□□□ -1.42
GDAP2-201ENST00000369442 MT1FP04733 61 aa6.11□□□□□ -1.43
GDAP2-201ENST00000369442 MT2AP02795 61 aa6.1□□□□□ -1.43
GDAP2-201ENST00000369442 KRTAP9-8Q9BYQ0 159 aa6.08□□□□□ -1.44
GDAP2-201ENST00000369442 KRTAP10-10P60014 251 aa6.08□□□□□ -1.44
GDAP2-201ENST00000369442 KRTAP19-1Q8IUB9 90 aa6.06□□□□□ -1.44
GDAP2-201ENST00000369442 CAMK2N1Q7Z7J9 78 aa6.05□□□□□ -1.44
GDAP2-201ENST00000369442 SPRR2GQ9BYE4 73 aa6□□□□□ -1.45
GDAP2-201ENST00000369442 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
GDAP2-201ENST00000369442 PLAC4Q8WY50 150 aa5.88□□□□□ -1.47
GDAP2-201ENST00000369442 KRTAP4-6Q9BYQ5 205 aa5.88□□□□□ -1.47
GDAP2-201ENST00000369442 KRTAP9-3Q9BYQ3 159 aa5.84□□□□□ -1.48
GDAP2-201ENST00000369442 MT1BP07438 61 aa5.8□□□□□ -1.48
GDAP2-201ENST00000369442 LCE2AQ5TA79 106 aaPredicted RBP5.8□□□□□ -1.48
GDAP2-201ENST00000369442 KRTAP19-8Q3LI54 63 aa5.79□□□□□ -1.48
GDAP2-201ENST00000369442 USH2AO75445 5202 aa5.73□□□□□ -1.49
GDAP2-201ENST00000369442 TNP1P09430 55 aa5.73□□□□□ -1.49
GDAP2-201ENST00000369442 LCE2BO14633 110 aa5.71□□□□□ -1.5
GDAP2-201ENST00000369442 MT1XP80297 61 aa5.68□□□□□ -1.5
GDAP2-201ENST00000369442 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
GDAP2-201ENST00000369442 PP632Q6XCG6 107 aa5.57□□□□□ -1.52
GDAP2-201ENST00000369442 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
GDAP2-201ENST00000369442 KRTAP10-7P60409 375 aaPredicted RBP5.54□□□□□ -1.52
GDAP2-201ENST00000369442 KRTAP15-1Q3LI76 137 aa5.53□□□□□ -1.52
GDAP2-201ENST00000369442 KMT2DO14686 5537 aa5.47□□□□□ -1.53
GDAP2-201ENST00000369442 KRTAP23-1A1A580 65 aa5.44□□□□□ -1.54
GDAP2-201ENST00000369442 KRTAP10-12P60413 245 aa5.44□□□□□ -1.54
GDAP2-201ENST00000369442 PRO2289Q9P1D8 64 aa5.43□□□□□ -1.54
GDAP2-201ENST00000369442 FSIP2Q5CZC0 6907 aa5.41□□□□□ -1.54
GDAP2-201ENST00000369442 SSPOA2VEC9 5147 aa5.37□□□□□ -1.55
GDAP2-201ENST00000369442 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
GDAP2-201ENST00000369442 KRTAP8-1Q8IUC2 63 aa5.32□□□□□ -1.56
GDAP2-201ENST00000369442 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
GDAP2-201ENST00000369442 H3BS24 57 aa5.31□□□□□ -1.56
GDAP2-201ENST00000369442 NDUFAF8A1L188 74 aa5.3□□□□□ -1.56
GDAP2-201ENST00000369442 KRTAP12-3P60328 96 aa5.26□□□□□ -1.57
GDAP2-201ENST00000369442 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
GDAP2-201ENST00000369442 KRTAP19-6Q3LI70 58 aa5.15□□□□□ -1.59
GDAP2-201ENST00000369442 SPRR5A0A1B0GTR4 108 aa5.11□□□□□ -1.59
GDAP2-201ENST00000369442 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.6
GDAP2-201ENST00000369442 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.08□□□□□ -1.6
GDAP2-201ENST00000369442 LUZP6Q538Z0 58 aa5.07□□□□□ -1.6
GDAP2-201ENST00000369442 KRTAP9-2Q9BYQ4 174 aa5.07□□□□□ -1.6
GDAP2-201ENST00000369442 KRTAP19-7Q3SYF9 63 aa5.06□□□□□ -1.6
GDAP2-201ENST00000369442 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
GDAP2-201ENST00000369442 KRTAP4-7Q9BYR0 210 aa4.96□□□□□ -1.62
GDAP2-201ENST00000369442 MT1EP04732 61 aa4.93□□□□□ -1.62
GDAP2-201ENST00000369442 LCE3BQ5TA77 95 aa4.93□□□□□ -1.62
GDAP2-201ENST00000369442 LCE3CQ5T5A8 94 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms