RNA–Protein interactions for RNA: ENST00000369023.7

NSMCE4A-202, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,394 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-202ENST00000369023 LCE2DQ5TA82 110 aaPredicted RBP11.52□□□□□ -0.57
NSMCE4A-202ENST00000369023 CCDC179H3BU77 68 aa11.48□□□□□ -0.57
NSMCE4A-202ENST00000369023 NDUFC1O43677 76 aa11.48□□□□□ -0.57
NSMCE4A-202ENST00000369023 KRTAP10-10P60014 251 aa11.47□□□□□ -0.57
NSMCE4A-202ENST00000369023 KRTAP9-2Q9BYQ4 174 aa11.47□□□□□ -0.57
NSMCE4A-202ENST00000369023 KRTAP3-3Q9BYR6 98 aa11.46□□□□□ -0.57
NSMCE4A-202ENST00000369023 MT1FP04733 61 aa11.43□□□□□ -0.58
NSMCE4A-202ENST00000369023 SPANXA2-OT1Q8N9U9 137 aa11.41□□□□□ -0.58
NSMCE4A-202ENST00000369023 ACYP2P14621 99 aa11.41□□□□□ -0.58
NSMCE4A-202ENST00000369023 CYSTM1Q9H1C7 97 aa11.37□□□□□ -0.59
NSMCE4A-202ENST00000369023 H7BZZ5 65 aa11.28□□□□□ -0.6
NSMCE4A-202ENST00000369023 KRTAP9-3Q9BYQ3 159 aa11.26□□□□□ -0.61
NSMCE4A-202ENST00000369023 H0YAA0 97 aa11.21□□□□□ -0.61
NSMCE4A-202ENST00000369023 CHKB-CPT1BH3BT56 60 aa11.21□□□□□ -0.61
NSMCE4A-202ENST00000369023 SPTSSBQ8NFR3 76 aa11.2□□□□□ -0.62
NSMCE4A-202ENST00000369023 TMEM258P61165 79 aa11.1□□□□□ -0.63
NSMCE4A-202ENST00000369023 ADM2Q7Z4H4 148 aa11.07□□□□□ -0.64
NSMCE4A-202ENST00000369023 CRIPTQ9P021 101 aa11.05□□□□□ -0.64
NSMCE4A-202ENST00000369023 LCE2BO14633 110 aa11.04□□□□□ -0.64
NSMCE4A-202ENST00000369023 COA5Q86WW8 74 aa11.03□□□□□ -0.64
NSMCE4A-202ENST00000369023 ATP5EP56381 51 aaPredicted RBP11.02□□□□□ -0.65
NSMCE4A-202ENST00000369023 CRCT1Q9UGL9 99 aa10.96□□□□□ -0.65
NSMCE4A-202ENST00000369023 KRTAP19-1Q8IUB9 90 aa10.94□□□□□ -0.66
NSMCE4A-202ENST00000369023 SPRR2GQ9BYE4 73 aa10.94□□□□□ -0.66
NSMCE4A-202ENST00000369023 FSIP2Q5CZC0 6907 aa10.94□□□□□ -0.66
NSMCE4A-202ENST00000369023 USH2AO75445 5202 aa10.92□□□□□ -0.66
NSMCE4A-202ENST00000369023 KRTAP9-6A0A140TA67 174 aa10.9□□□□□ -0.66
NSMCE4A-202ENST00000369023 P0C880 135 aa10.86□□□□□ -0.67
NSMCE4A-202ENST00000369023 KRTAP3-2Q9BYR7 98 aa10.85□□□□□ -0.67
NSMCE4A-202ENST00000369023 R4GN34 69 aa10.78□□□□□ -0.68
NSMCE4A-202ENST00000369023 KRTAP19-8Q3LI54 63 aa10.77□□□□□ -0.69
NSMCE4A-202ENST00000369023 Q5VV11 94 aa10.77□□□□□ -0.69
NSMCE4A-202ENST00000369023 SERP1Q9Y6X1 66 aa10.75□□□□□ -0.69
NSMCE4A-202ENST00000369023 M0QZ58 72 aa10.7□□□□□ -0.7
NSMCE4A-202ENST00000369023 SEC61GP60059 68 aa10.7□□□□□ -0.7
NSMCE4A-202ENST00000369023 SSPOA2VEC9 5147 aa10.69□□□□□ -0.7
NSMCE4A-202ENST00000369023 RPS28P62857 69 aaKnown RBP10.67□□□□□ -0.7
NSMCE4A-202ENST00000369023 MT1BP07438 61 aa10.65□□□□□ -0.7
NSMCE4A-202ENST00000369023 KRTAP19-6Q3LI70 58 aa10.62□□□□□ -0.71
NSMCE4A-202ENST00000369023 LINC01554Q52M75 96 aa10.51□□□□□ -0.73
NSMCE4A-202ENST00000369023 A0A1B0GU69 56 aa10.49□□□□□ -0.73
NSMCE4A-202ENST00000369023 PLAC4Q8WY50 150 aa10.47□□□□□ -0.73
NSMCE4A-202ENST00000369023 SMIM26A0A096LP01 95 aa10.42□□□□□ -0.74
NSMCE4A-202ENST00000369023 A0A1B0GU33 70 aa10.4□□□□□ -0.74
NSMCE4A-202ENST00000369023 FCGBPQ9Y6R7 5405 aaPredicted RBP10.4□□□□□ -0.75
NSMCE4A-202ENST00000369023 A6NN06 94 aa10.39□□□□□ -0.75
NSMCE4A-202ENST00000369023 PRR15LQ9BU68 103 aa10.39□□□□□ -0.75
NSMCE4A-202ENST00000369023 LINC01558Q9Y6Z2 57 aa10.36□□□□□ -0.75
NSMCE4A-202ENST00000369023 KRTAP13-4Q3LI77 160 aa10.35□□□□□ -0.75
NSMCE4A-202ENST00000369023 KRTAP10-5P60370 271 aa10.32□□□□□ -0.76
NSMCE4A-202ENST00000369023 Q1T7F1 81 aa10.31□□□□□ -0.76
NSMCE4A-202ENST00000369023 V9GYY9 64 aa10.26□□□□□ -0.77
NSMCE4A-202ENST00000369023 PRO2289Q9P1D8 64 aa10.26□□□□□ -0.77
NSMCE4A-202ENST00000369023 SPATA8Q6RVD6 105 aa10.23□□□□□ -0.77
NSMCE4A-202ENST00000369023 A0A0D9SG42 100 aa10.15□□□□□ -0.78
NSMCE4A-202ENST00000369023 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.15□□□□□ -0.78
NSMCE4A-202ENST00000369023 MT1XP80297 61 aa10.14□□□□□ -0.79
NSMCE4A-202ENST00000369023 UQCR11O14957 56 aa10.03□□□□□ -0.8
NSMCE4A-202ENST00000369023 PSPHP1O15172 72 aa10.02□□□□□ -0.8
NSMCE4A-202ENST00000369023 CAMK2N1Q7Z7J9 78 aa10.02□□□□□ -0.8
NSMCE4A-202ENST00000369023 SPINT4Q6UDR6 99 aa10□□□□□ -0.81
NSMCE4A-202ENST00000369023 MACF1Q9UPN3 7388 aaKnown RBP9.96□□□□□ -0.82
NSMCE4A-202ENST00000369023 A8MU10 97 aa9.95□□□□□ -0.82
NSMCE4A-202ENST00000369023 KRTAP12-1P59990 96 aa9.95□□□□□ -0.82
NSMCE4A-202ENST00000369023 KRTAP9-7A8MTY7 169 aa9.88□□□□□ -0.83
NSMCE4A-202ENST00000369023 KRTAP12-2P59991 146 aa9.88□□□□□ -0.83
NSMCE4A-202ENST00000369023 MIR22HGQ0VDD5 57 aa9.83□□□□□ -0.84
NSMCE4A-202ENST00000369023 SYNE2Q8WXH0 6885 aaKnown RBP9.75□□□□□ -0.85
NSMCE4A-202ENST00000369023 KRTAP6-3Q3LI67 103 aa9.73□□□□□ -0.85
NSMCE4A-202ENST00000369023 A6NED7 52 aa9.72□□□□□ -0.85
NSMCE4A-202ENST00000369023 KRTAP10-7P60409 375 aaPredicted RBP9.67□□□□□ -0.86
NSMCE4A-202ENST00000369023 KRTAP10-12P60413 245 aa9.65□□□□□ -0.86
NSMCE4A-202ENST00000369023 K7ERS5 55 aa9.62□□□□□ -0.87
NSMCE4A-202ENST00000369023 CDC42SE1Q9NRR8 79 aa9.61□□□□□ -0.87
NSMCE4A-202ENST00000369023 KRTAP8-1Q8IUC2 63 aa9.54□□□□□ -0.88
NSMCE4A-202ENST00000369023 KRTAP5-9P26371 169 aa9.5□□□□□ -0.89
NSMCE4A-202ENST00000369023 KMT2DO14686 5537 aa9.49□□□□□ -0.89
NSMCE4A-202ENST00000369023 KRTAP4-8A0A0G2JLE6 195 aa9.49□□□□□ -0.89
NSMCE4A-202ENST00000369023 KRTAP4-8Q9BYQ9 185 aa9.49□□□□□ -0.89
NSMCE4A-202ENST00000369023 BRK1Q8WUW1 75 aa9.45□□□□□ -0.9
NSMCE4A-202ENST00000369023 C10orf95Q9H7T3 257 aa9.45□□□□□ -0.9
NSMCE4A-202ENST00000369023 TNP1P09430 55 aa9.39□□□□□ -0.91
NSMCE4A-202ENST00000369023 SPRR2FQ96RM1 72 aa9.37□□□□□ -0.91
NSMCE4A-202ENST00000369023 MUC12Q9UKN1 5478 aa9.25□□□□□ -0.93
NSMCE4A-202ENST00000369023 PRO0628Q9UI54 55 aa9.22□□□□□ -0.93
NSMCE4A-202ENST00000369023 KRTAP25-1Q3LHN0 102 aa9.16□□□□□ -0.94
NSMCE4A-202ENST00000369023 NEBP20929 6669 aa9.14□□□□□ -0.95
NSMCE4A-202ENST00000369023 SPRR2EP22531 72 aa9.1□□□□□ -0.95
NSMCE4A-202ENST00000369023 SPRR2BP35325 72 aa9.1□□□□□ -0.95
NSMCE4A-202ENST00000369023 SPRR2AP35326 72 aa9.1□□□□□ -0.95
NSMCE4A-202ENST00000369023 MDN1Q9NU22 5596 aa9.08□□□□□ -0.96
NSMCE4A-202ENST00000369023 LCE3AQ5TA76 89 aa9.07□□□□□ -0.96
NSMCE4A-202ENST00000369023 KRTAP19-7Q3SYF9 63 aa9.04□□□□□ -0.96
NSMCE4A-202ENST00000369023 LCE1AQ5T7P2 110 aa9.02□□□□□ -0.97
NSMCE4A-202ENST00000369023 ROMO1P60602 79 aa9□□□□□ -0.97
NSMCE4A-202ENST00000369023 KRTAP19-5Q3LI72 72 aa8.99□□□□□ -0.97
NSMCE4A-202ENST00000369023 MT1EP04732 61 aa8.96□□□□□ -0.98
NSMCE4A-202ENST00000369023 PMAIP1Q13794 54 aa8.94□□□□□ -0.98
NSMCE4A-202ENST00000369023 KRTAP23-1A1A580 65 aa8.86□□□□□ -0.99
NSMCE4A-202ENST00000369023 SPRR2DP22532 72 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms