RNA–Protein interactions for RNA: ENST00000369017.5

NSMCE4A-201, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best) BASIC

Gene NSMCE4A, Length 1,224 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-201ENST00000369017 KRTAP10-6P60371 365 aaPredicted RBP12.13□□□□□ -0.47
NSMCE4A-201ENST00000369017 CYSTM1Q9H1C7 97 aa12.07□□□□□ -0.48
NSMCE4A-201ENST00000369017 LORP23490 312 aaPredicted RBP12.06□□□□□ -0.48
NSMCE4A-201ENST00000369017 CHKB-CPT1BH3BT56 60 aa12.03□□□□□ -0.48
NSMCE4A-201ENST00000369017 SPTSSBQ8NFR3 76 aa12.03□□□□□ -0.48
NSMCE4A-201ENST00000369017 KRTAP3-3Q9BYR6 98 aa12□□□□□ -0.49
NSMCE4A-201ENST00000369017 ATP5EP56381 51 aaPredicted RBP11.99□□□□□ -0.49
NSMCE4A-201ENST00000369017 TMEM258P61165 79 aa11.91□□□□□ -0.5
NSMCE4A-201ENST00000369017 KRTAP9-8Q9BYQ0 159 aa11.9□□□□□ -0.5
NSMCE4A-201ENST00000369017 COA5Q86WW8 74 aa11.86□□□□□ -0.51
NSMCE4A-201ENST00000369017 PCP4P48539 62 aa11.85□□□□□ -0.51
NSMCE4A-201ENST00000369017 H0YAA0 97 aa11.81□□□□□ -0.52
NSMCE4A-201ENST00000369017 MT2AP02795 61 aa11.81□□□□□ -0.52
NSMCE4A-201ENST00000369017 KRTAP10-10P60014 251 aa11.81□□□□□ -0.52
NSMCE4A-201ENST00000369017 MT1FP04733 61 aa11.71□□□□□ -0.53
NSMCE4A-201ENST00000369017 ADM2Q7Z4H4 148 aa11.65□□□□□ -0.54
NSMCE4A-201ENST00000369017 LCE2DQ5TA82 110 aaPredicted RBP11.61□□□□□ -0.55
NSMCE4A-201ENST00000369017 CRIPTQ9P021 101 aa11.59□□□□□ -0.55
NSMCE4A-201ENST00000369017 SEC61GP60059 68 aa11.54□□□□□ -0.56
NSMCE4A-201ENST00000369017 SERP1Q9Y6X1 66 aa11.52□□□□□ -0.57
NSMCE4A-201ENST00000369017 KRTAP9-3Q9BYQ3 159 aa11.5□□□□□ -0.57
NSMCE4A-201ENST00000369017 KRTAP9-2Q9BYQ4 174 aa11.42□□□□□ -0.58
NSMCE4A-201ENST00000369017 KRTAP3-2Q9BYR7 98 aa11.41□□□□□ -0.58
NSMCE4A-201ENST00000369017 P0C880 135 aa11.4□□□□□ -0.58
NSMCE4A-201ENST00000369017 R4GN34 69 aa11.37□□□□□ -0.59
NSMCE4A-201ENST00000369017 SPRR2GQ9BYE4 73 aa11.35□□□□□ -0.59
NSMCE4A-201ENST00000369017 A0A1B0GU69 56 aa11.32□□□□□ -0.6
NSMCE4A-201ENST00000369017 PRR15LQ9BU68 103 aa11.3□□□□□ -0.6
NSMCE4A-201ENST00000369017 KRTAP19-1Q8IUB9 90 aa11.28□□□□□ -0.6
NSMCE4A-201ENST00000369017 M0QZ58 72 aa11.26□□□□□ -0.61
NSMCE4A-201ENST00000369017 LCE2BO14633 110 aa11.24□□□□□ -0.61
NSMCE4A-201ENST00000369017 RPS28P62857 69 aaKnown RBP11.24□□□□□ -0.61
NSMCE4A-201ENST00000369017 LINC01558Q9Y6Z2 57 aa11.23□□□□□ -0.61
NSMCE4A-201ENST00000369017 V9GYY9 64 aa11.2□□□□□ -0.62
NSMCE4A-201ENST00000369017 SMIM26A0A096LP01 95 aa11.15□□□□□ -0.62
NSMCE4A-201ENST00000369017 A0A1B0GU33 70 aa11.15□□□□□ -0.62
NSMCE4A-201ENST00000369017 Q5VV11 94 aa11.15□□□□□ -0.62
NSMCE4A-201ENST00000369017 KRTAP19-8Q3LI54 63 aa11.12□□□□□ -0.63
NSMCE4A-201ENST00000369017 Q1T7F1 81 aa11.06□□□□□ -0.64
NSMCE4A-201ENST00000369017 LINC01554Q52M75 96 aa11.04□□□□□ -0.64
NSMCE4A-201ENST00000369017 PLAC4Q8WY50 150 aa10.97□□□□□ -0.65
NSMCE4A-201ENST00000369017 CRCT1Q9UGL9 99 aa10.96□□□□□ -0.65
NSMCE4A-201ENST00000369017 MT1BP07438 61 aa10.94□□□□□ -0.66
NSMCE4A-201ENST00000369017 KRTAP13-4Q3LI77 160 aa10.92□□□□□ -0.66
NSMCE4A-201ENST00000369017 A6NN06 94 aa10.91□□□□□ -0.66
NSMCE4A-201ENST00000369017 UQCR11O14957 56 aa10.89□□□□□ -0.67
NSMCE4A-201ENST00000369017 USH2AO75445 5202 aa10.88□□□□□ -0.67
NSMCE4A-201ENST00000369017 SPATA8Q6RVD6 105 aa10.88□□□□□ -0.67
NSMCE4A-201ENST00000369017 PSPHP1O15172 72 aa10.84□□□□□ -0.67
NSMCE4A-201ENST00000369017 FSIP2Q5CZC0 6907 aa10.84□□□□□ -0.67
NSMCE4A-201ENST00000369017 KRTAP9-6A0A140TA67 174 aa10.81□□□□□ -0.68
NSMCE4A-201ENST00000369017 KRTAP19-6Q3LI70 58 aa10.8□□□□□ -0.68
NSMCE4A-201ENST00000369017 A0A0D9SG42 100 aa10.77□□□□□ -0.69
NSMCE4A-201ENST00000369017 PRO2289Q9P1D8 64 aa10.69□□□□□ -0.7
NSMCE4A-201ENST00000369017 MIR22HGQ0VDD5 57 aa10.66□□□□□ -0.7
NSMCE4A-201ENST00000369017 SPINT4Q6UDR6 99 aa10.62□□□□□ -0.71
NSMCE4A-201ENST00000369017 SSPOA2VEC9 5147 aa10.61□□□□□ -0.71
NSMCE4A-201ENST00000369017 A6NED7 52 aa10.61□□□□□ -0.71
NSMCE4A-201ENST00000369017 KRTAP10-5P60370 271 aa10.61□□□□□ -0.71
NSMCE4A-201ENST00000369017 A8MU10 97 aa10.6□□□□□ -0.71
NSMCE4A-201ENST00000369017 CAMK2N1Q7Z7J9 78 aa10.59□□□□□ -0.71
NSMCE4A-201ENST00000369017 KRTAP12-1P59990 96 aa10.55□□□□□ -0.72
NSMCE4A-201ENST00000369017 KRTAP12-2P59991 146 aa10.47□□□□□ -0.73
NSMCE4A-201ENST00000369017 K7ERS5 55 aa10.46□□□□□ -0.73
NSMCE4A-201ENST00000369017 MT1XP80297 61 aa10.46□□□□□ -0.73
NSMCE4A-201ENST00000369017 FCGBPQ9Y6R7 5405 aaPredicted RBP10.33□□□□□ -0.76
NSMCE4A-201ENST00000369017 CDC42SE1Q9NRR8 79 aa10.3□□□□□ -0.76
NSMCE4A-201ENST00000369017 KRTAP9-1A8MXZ3 250 aaPredicted RBP10.12□□□□□ -0.79
NSMCE4A-201ENST00000369017 KRTAP10-12P60413 245 aa9.99□□□□□ -0.81
NSMCE4A-201ENST00000369017 BRK1Q8WUW1 75 aa9.99□□□□□ -0.81
NSMCE4A-201ENST00000369017 C10orf95Q9H7T3 257 aa9.99□□□□□ -0.81
NSMCE4A-201ENST00000369017 TNP1P09430 55 aa9.98□□□□□ -0.81
NSMCE4A-201ENST00000369017 KRTAP10-7P60409 375 aaPredicted RBP9.98□□□□□ -0.81
NSMCE4A-201ENST00000369017 MACF1Q9UPN3 7388 aaKnown RBP9.95□□□□□ -0.82
NSMCE4A-201ENST00000369017 KRTAP25-1Q3LHN0 102 aa9.81□□□□□ -0.84
NSMCE4A-201ENST00000369017 KRTAP9-7A8MTY7 169 aa9.8□□□□□ -0.84
NSMCE4A-201ENST00000369017 KRTAP8-1Q8IUC2 63 aa9.8□□□□□ -0.84
NSMCE4A-201ENST00000369017 KRTAP6-3Q3LI67 103 aa9.78□□□□□ -0.84
NSMCE4A-201ENST00000369017 ROMO1P60602 79 aa9.77□□□□□ -0.85
NSMCE4A-201ENST00000369017 KRTAP4-8A0A0G2JLE6 195 aa9.72□□□□□ -0.85
NSMCE4A-201ENST00000369017 KRTAP4-8Q9BYQ9 185 aa9.72□□□□□ -0.85
NSMCE4A-201ENST00000369017 KRTAP5-9P26371 169 aa9.63□□□□□ -0.87
NSMCE4A-201ENST00000369017 SYNE2Q8WXH0 6885 aaKnown RBP9.62□□□□□ -0.87
NSMCE4A-201ENST00000369017 KMT2DO14686 5537 aa9.56□□□□□ -0.88
NSMCE4A-201ENST00000369017 SPRR2FQ96RM1 72 aa9.55□□□□□ -0.88
NSMCE4A-201ENST00000369017 KRTAP23-1A1A580 65 aa9.51□□□□□ -0.89
NSMCE4A-201ENST00000369017 LCE3AQ5TA76 89 aa9.51□□□□□ -0.89
NSMCE4A-201ENST00000369017 PMAIP1Q13794 54 aa9.47□□□□□ -0.89
NSMCE4A-201ENST00000369017 PRO0628Q9UI54 55 aa9.47□□□□□ -0.89
NSMCE4A-201ENST00000369017 PP632Q6XCG6 107 aa9.39□□□□□ -0.91
NSMCE4A-201ENST00000369017 KRTAP19-5Q3LI72 72 aa9.33□□□□□ -0.92
NSMCE4A-201ENST00000369017 KRTAP19-7Q3SYF9 63 aa9.33□□□□□ -0.92
NSMCE4A-201ENST00000369017 MT1EP04732 61 aa9.24□□□□□ -0.93
NSMCE4A-201ENST00000369017 SPRR2EP22531 72 aa9.22□□□□□ -0.93
NSMCE4A-201ENST00000369017 SPRR2BP35325 72 aa9.22□□□□□ -0.93
NSMCE4A-201ENST00000369017 SPRR2AP35326 72 aa9.22□□□□□ -0.93
NSMCE4A-201ENST00000369017 KRTAP12-3P60328 96 aa9.22□□□□□ -0.93
NSMCE4A-201ENST00000369017 LCE1AQ5T7P2 110 aa9.16□□□□□ -0.94
NSMCE4A-201ENST00000369017 MUC12Q9UKN1 5478 aa9.12□□□□□ -0.95
NSMCE4A-201ENST00000369017 KRTAP19-3Q7Z4W3 81 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms