RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 C10orf95Q9H7T3 257 aa8.55□□□□□ -1.04
SEMA6C-202ENST00000368912 VPS13BQ7Z7G8 4022 aa8.53□□□□□ -1.04
SEMA6C-202ENST00000368912 PKD1P98161 4303 aa8.52□□□□□ -1.05
SEMA6C-202ENST00000368912 H1FX-AS1Q4G0G2 97 aa8.51□□□□□ -1.05
SEMA6C-202ENST00000368912 APOBP04114 4563 aaKnown RBP8.5□□□□□ -1.05
SEMA6C-202ENST00000368912 KRTAP15-1Q3LI76 137 aa8.49□□□□□ -1.05
SEMA6C-202ENST00000368912 TPRXLQ17RH7 258 aa8.47□□□□□ -1.05
SEMA6C-202ENST00000368912 EPPK1P58107 5090 aaKnown RBP8.46□□□□□ -1.06
SEMA6C-202ENST00000368912 J3QL48 77 aa8.45□□□□□ -1.06
SEMA6C-202ENST00000368912 A0A0D9SG42 100 aa8.45□□□□□ -1.06
SEMA6C-202ENST00000368912 LRP1Q07954 4544 aaKnown RBP8.43□□□□□ -1.06
SEMA6C-202ENST00000368912 KRTAP4-5Q9BYR2 181 aa8.42□□□□□ -1.06
SEMA6C-202ENST00000368912 KRTAP17-1Q9BYP8 105 aa8.39□□□□□ -1.07
SEMA6C-202ENST00000368912 RYR1P21817 5038 aa8.39□□□□□ -1.07
SEMA6C-202ENST00000368912 MYCBP2O75592 4640 aa8.38□□□□□ -1.07
SEMA6C-202ENST00000368912 RPL37P61927 97 aaKnown RBP8.32□□□□□ -1.08
SEMA6C-202ENST00000368912 KRTAP10-4P60372 401 aaPredicted RBP8.31□□□□□ -1.08
SEMA6C-202ENST00000368912 COX6B2Q6YFQ2 88 aa8.29□□□□□ -1.08
SEMA6C-202ENST00000368912 SEC61BP60468 96 aaKnown RBP8.27□□□□□ -1.08
SEMA6C-202ENST00000368912 FAT3Q8TDW7 4589 aa8.27□□□□□ -1.09
SEMA6C-202ENST00000368912 HSPG2P98160 4391 aa8.22□□□□□ -1.09
SEMA6C-202ENST00000368912 KRTAP10-8P60410 259 aa8.13□□□□□ -1.11
SEMA6C-202ENST00000368912 HERC2O95714 4834 aa8.06□□□□□ -1.12
SEMA6C-202ENST00000368912 MT1HL1P0DM35 61 aa8.06□□□□□ -1.12
SEMA6C-202ENST00000368912 ABCA13Q86UQ4 5058 aa8.01□□□□□ -1.13
SEMA6C-202ENST00000368912 RPS29P62273 56 aaKnown RBP7.96□□□□□ -1.14
SEMA6C-202ENST00000368912 S4R3F8 94 aa7.96□□□□□ -1.14
SEMA6C-202ENST00000368912 KRTAP13-4Q3LI77 160 aa7.93□□□□□ -1.14
SEMA6C-202ENST00000368912 XP32Q5T750 250 aa7.92□□□□□ -1.14
SEMA6C-202ENST00000368912 KRTAP3-1Q9BYR8 98 aa7.91□□□□□ -1.14
SEMA6C-202ENST00000368912 PKHD1L1Q86WI1 4243 aa7.9□□□□□ -1.14
SEMA6C-202ENST00000368912 PLAC4Q8WY50 150 aa7.9□□□□□ -1.14
SEMA6C-202ENST00000368912 BIRC6Q9NR09 4857 aa7.89□□□□□ -1.15
SEMA6C-202ENST00000368912 LRP2P98164 4655 aa7.88□□□□□ -1.15
SEMA6C-202ENST00000368912 LPAP08519 4548 aa7.84□□□□□ -1.15
SEMA6C-202ENST00000368912 KRTAP12-2P59991 146 aa7.82□□□□□ -1.16
SEMA6C-202ENST00000368912 HERC1Q15751 4861 aa7.8□□□□□ -1.16
SEMA6C-202ENST00000368912 KRTAP10-6P60371 365 aaPredicted RBP7.75□□□□□ -1.17
SEMA6C-202ENST00000368912 PCLOQ9Y6V0 5065 aa7.74□□□□□ -1.17
SEMA6C-202ENST00000368912 TNXBP22105 4242 aa7.73□□□□□ -1.17
SEMA6C-202ENST00000368912 CAMK2N1Q7Z7J9 78 aa7.7□□□□□ -1.18
SEMA6C-202ENST00000368912 MUC2Q02817 5179 aa7.62□□□□□ -1.19
SEMA6C-202ENST00000368912 KRTAP12-1P59990 96 aa7.62□□□□□ -1.19
SEMA6C-202ENST00000368912 KRTAP3-2Q9BYR7 98 aa7.62□□□□□ -1.19
SEMA6C-202ENST00000368912 RNF213Q63HN8 5207 aa7.53□□□□□ -1.2
SEMA6C-202ENST00000368912 M0R2T5 61 aa7.5□□□□□ -1.21
SEMA6C-202ENST00000368912 UBR4Q5T4S7 5183 aa7.45□□□□□ -1.22
SEMA6C-202ENST00000368912 KRTAP4-1Q9BYQ7 146 aa7.45□□□□□ -1.22
SEMA6C-202ENST00000368912 KRTAP3-3Q9BYR6 98 aa7.44□□□□□ -1.22
SEMA6C-202ENST00000368912 PRO2289Q9P1D8 64 aa7.34□□□□□ -1.23
SEMA6C-202ENST00000368912 M0QZ58 72 aa7.32□□□□□ -1.24
SEMA6C-202ENST00000368912 FAT4Q6V0I7 4981 aa7.3□□□□□ -1.24
SEMA6C-202ENST00000368912 R4GN34 69 aa7.28□□□□□ -1.24
SEMA6C-202ENST00000368912 HMCN2Q8NDA2 5059 aa7.26□□□□□ -1.25
SEMA6C-202ENST00000368912 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
SEMA6C-202ENST00000368912 LORP23490 312 aaPredicted RBP6.97□□□□□ -1.29
SEMA6C-202ENST00000368912 KRTAP10-10P60014 251 aa6.96□□□□□ -1.3
SEMA6C-202ENST00000368912 INE1O15225 51 aa6.95□□□□□ -1.3
SEMA6C-202ENST00000368912 MUC17Q685J3 4493 aa6.94□□□□□ -1.3
SEMA6C-202ENST00000368912 MT1HP80294 61 aa6.83□□□□□ -1.32
SEMA6C-202ENST00000368912 FSIP2Q5CZC0 6907 aa6.81□□□□□ -1.32
SEMA6C-202ENST00000368912 LCE2CQ5TA81 110 aa6.8□□□□□ -1.32
SEMA6C-202ENST00000368912 KRTAP19-2Q3LHN2 52 aa6.8□□□□□ -1.32
SEMA6C-202ENST00000368912 TNP1P09430 55 aa6.75□□□□□ -1.33
SEMA6C-202ENST00000368912 SPRR5A0A1B0GTR4 108 aa6.72□□□□□ -1.33
SEMA6C-202ENST00000368912 FLGP20930 4061 aaPredicted RBP6.71□□□□□ -1.34
SEMA6C-202ENST00000368912 MT1FP04733 61 aa6.62□□□□□ -1.35
SEMA6C-202ENST00000368912 MT2AP02795 61 aa6.6□□□□□ -1.35
SEMA6C-202ENST00000368912 USH2AO75445 5202 aa6.52□□□□□ -1.37
SEMA6C-202ENST00000368912 KRTAP9-8Q9BYQ0 159 aa6.47□□□□□ -1.37
SEMA6C-202ENST00000368912 KRTAP19-1Q8IUB9 90 aa6.39□□□□□ -1.39
SEMA6C-202ENST00000368912 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
SEMA6C-202ENST00000368912 SPRR2GQ9BYE4 73 aa6.26□□□□□ -1.41
SEMA6C-202ENST00000368912 LCE2AQ5TA79 106 aaPredicted RBP6.26□□□□□ -1.41
SEMA6C-202ENST00000368912 KRTAP9-3Q9BYQ3 159 aa6.21□□□□□ -1.41
SEMA6C-202ENST00000368912 LCE2BO14633 110 aa6.19□□□□□ -1.42
SEMA6C-202ENST00000368912 LCE3AQ5TA76 89 aa6.18□□□□□ -1.42
SEMA6C-202ENST00000368912 MT1BP07438 61 aa6.14□□□□□ -1.43
SEMA6C-202ENST00000368912 KMT2DO14686 5537 aa6.05□□□□□ -1.44
SEMA6C-202ENST00000368912 KRTAP19-8Q3LI54 63 aa6.01□□□□□ -1.45
SEMA6C-202ENST00000368912 MT1XP80297 61 aa5.97□□□□□ -1.45
SEMA6C-202ENST00000368912 KRTAP10-5P60370 271 aa5.95□□□□□ -1.46
SEMA6C-202ENST00000368912 KRTAP10-7P60409 375 aaPredicted RBP5.94□□□□□ -1.46
SEMA6C-202ENST00000368912 SSPOA2VEC9 5147 aa5.93□□□□□ -1.46
SEMA6C-202ENST00000368912 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
SEMA6C-202ENST00000368912 KRTAP4-8A0A0G2JLE6 195 aa5.87□□□□□ -1.47
SEMA6C-202ENST00000368912 KRTAP4-8Q9BYQ9 185 aa5.87□□□□□ -1.47
SEMA6C-202ENST00000368912 KRTAP12-3P60328 96 aa5.85□□□□□ -1.47
SEMA6C-202ENST00000368912 KRTAP8-1Q8IUC2 63 aa5.79□□□□□ -1.48
SEMA6C-202ENST00000368912 KRTAP9-2Q9BYQ4 174 aa5.76□□□□□ -1.49
SEMA6C-202ENST00000368912 FCGBPQ9Y6R7 5405 aaPredicted RBP5.68□□□□□ -1.5
SEMA6C-202ENST00000368912 KRTAP19-5Q3LI72 72 aa5.63□□□□□ -1.51
SEMA6C-202ENST00000368912 DSTQ03001 7570 aaKnown RBP5.59□□□□□ -1.51
SEMA6C-202ENST00000368912 MUC12Q9UKN1 5478 aa5.58□□□□□ -1.52
SEMA6C-202ENST00000368912 SYNE2Q8WXH0 6885 aaKnown RBP5.58□□□□□ -1.52
SEMA6C-202ENST00000368912 MACF1Q9UPN3 7388 aaKnown RBP5.56□□□□□ -1.52
SEMA6C-202ENST00000368912 CRCT1Q9UGL9 99 aa5.56□□□□□ -1.52
SEMA6C-202ENST00000368912 KRTAP19-6Q3LI70 58 aa5.52□□□□□ -1.53
SEMA6C-202ENST00000368912 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
SEMA6C-202ENST00000368912 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms