RNA–Protein interactions for RNA: ENST00000368838.1

SNX27-201, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best) BASIC

Gene SNX27, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-201ENST00000368838 KRTAP13-3Q3SY46 172 aa4.8□□□□□ -1.64
SNX27-201ENST00000368838 ZCCHC13Q8WW36 166 aaKnown RBP4.8□□□□□ -1.64
SNX27-201ENST00000368838 TRAV22A0A0B4J277 110 aa4.79□□□□□ -1.64
SNX27-201ENST00000368838 MP68P56378 58 aa4.79□□□□□ -1.64
SNX27-201ENST00000368838 KRTAP9-3Q9BYQ3 159 aa4.79□□□□□ -1.64
SNX27-201ENST00000368838 CCDC179H3BU77 68 aa4.78□□□□□ -1.64
SNX27-201ENST00000368838 NDUFS5O43920 106 aa4.77□□□□□ -1.65
SNX27-201ENST00000368838 C20orf197Q8N268 126 aa4.75□□□□□ -1.65
SNX27-201ENST00000368838 KRTAP4-1Q9BYQ7 146 aa4.75□□□□□ -1.65
SNX27-201ENST00000368838 LOC101927531A0A1B0GV80 90 aa4.74□□□□□ -1.65
SNX27-201ENST00000368838 H0Y9P7 68 aa4.74□□□□□ -1.65
SNX27-201ENST00000368838 H7BZZ5 65 aa4.73□□□□□ -1.65
SNX27-201ENST00000368838 PRAC1Q96KF2 57 aa4.73□□□□□ -1.65
SNX27-201ENST00000368838 TMEM258P61165 79 aa4.72□□□□□ -1.65
SNX27-201ENST00000368838 Q5W150 140 aa4.72□□□□□ -1.65
SNX27-201ENST00000368838 SPANXA2-OT1Q8N9U9 137 aa4.72□□□□□ -1.65
SNX27-201ENST00000368838 C1orf64Q8NEQ6 169 aa4.71□□□□□ -1.66
SNX27-201ENST00000368838 LINC00208Q96KT6 92 aa4.71□□□□□ -1.66
SNX27-201ENST00000368838 RBM12B-AS1Q9P1G2 102 aa4.71□□□□□ -1.66
SNX27-201ENST00000368838 ATP5EP56381 51 aaPredicted RBP4.7□□□□□ -1.66
SNX27-201ENST00000368838 RPL37P61927 97 aaKnown RBP4.7□□□□□ -1.66
SNX27-201ENST00000368838 IGKV2-30P06310 120 aa4.69□□□□□ -1.66
SNX27-201ENST00000368838 CYP4F30PQ9H0H9 118 aa4.69□□□□□ -1.66
SNX27-201ENST00000368838 FSIP2Q5CZC0 6907 aa4.68□□□□□ -1.66
SNX27-201ENST00000368838 SMIM26A0A096LP01 95 aa4.68□□□□□ -1.66
SNX27-201ENST00000368838 CYSTM1Q9H1C7 97 aa4.68□□□□□ -1.66
SNX27-201ENST00000368838 SNURFQ9Y675 71 aa4.68□□□□□ -1.66
SNX27-201ENST00000368838 PSPHP1O15172 72 aa4.67□□□□□ -1.66
SNX27-201ENST00000368838 C9orf92A6NGG3 77 aa4.66□□□□□ -1.66
SNX27-201ENST00000368838 C7orf65Q6ZTY9 151 aa4.64□□□□□ -1.67
SNX27-201ENST00000368838 ATP11AUNQ6ZP68 121 aa4.63□□□□□ -1.67
SNX27-201ENST00000368838 PCOTHQ58A44 107 aa4.61□□□□□ -1.67
SNX27-201ENST00000368838 KRTAP19-2Q3LHN2 52 aa4.59□□□□□ -1.67
SNX27-201ENST00000368838 A8MUN3 132 aa4.58□□□□□ -1.68
SNX27-201ENST00000368838 CRCT1Q9UGL9 99 aa4.58□□□□□ -1.68
SNX27-201ENST00000368838 SPINK7P58062 85 aa4.57□□□□□ -1.68
SNX27-201ENST00000368838 MT1HP80294 61 aa4.57□□□□□ -1.68
SNX27-201ENST00000368838 HRES1P13985 223 aa4.56□□□□□ -1.68
SNX27-201ENST00000368838 KTN1-AS1Q86SY8 53 aa4.56□□□□□ -1.68
SNX27-201ENST00000368838 DMAC1Q96GE9 116 aa4.56□□□□□ -1.68
SNX27-201ENST00000368838 SERP1Q9Y6X1 66 aa4.56□□□□□ -1.68
SNX27-201ENST00000368838 IGKV2D-30A0A075B6S6 120 aa4.55□□□□□ -1.68
SNX27-201ENST00000368838 BRK1Q8WUW1 75 aa4.53□□□□□ -1.68
SNX27-201ENST00000368838 FLGP20930 4061 aaPredicted RBP4.52□□□□□ -1.69
SNX27-201ENST00000368838 ACYP2P14621 99 aa4.51□□□□□ -1.69
SNX27-201ENST00000368838 M0R2T5 61 aa4.5□□□□□ -1.69
SNX27-201ENST00000368838 KRTAP10-6P60371 365 aaPredicted RBP4.5□□□□□ -1.69
SNX27-201ENST00000368838 COX6B2Q6YFQ2 88 aa4.5□□□□□ -1.69
SNX27-201ENST00000368838 LCA10Q71F78 164 aa4.48□□□□□ -1.69
SNX27-201ENST00000368838 COA5Q86WW8 74 aa4.45□□□□□ -1.7
SNX27-201ENST00000368838 Q1T7F1 81 aa4.39□□□□□ -1.71
SNX27-201ENST00000368838 H1FX-AS1Q4G0G2 97 aa4.39□□□□□ -1.71
SNX27-201ENST00000368838 SPTSSBQ8NFR3 76 aa4.38□□□□□ -1.71
SNX27-201ENST00000368838 CHKB-CPT1BH3BT56 60 aa4.37□□□□□ -1.71
SNX27-201ENST00000368838 LINC01554Q52M75 96 aa4.36□□□□□ -1.71
SNX27-201ENST00000368838 LINC01558Q9Y6Z2 57 aa4.34□□□□□ -1.71
SNX27-201ENST00000368838 USH2AO75445 5202 aa4.34□□□□□ -1.72
SNX27-201ENST00000368838 SSPOA2VEC9 5147 aa4.34□□□□□ -1.72
SNX27-201ENST00000368838 S4R3F8 94 aa4.29□□□□□ -1.72
SNX27-201ENST00000368838 H0YAA0 97 aa4.27□□□□□ -1.73
SNX27-201ENST00000368838 CSAG1Q6PB30 78 aa4.26□□□□□ -1.73
SNX27-201ENST00000368838 LUZP6Q538Z0 58 aa4.25□□□□□ -1.73
SNX27-201ENST00000368838 CAMK2N1Q7Z7J9 78 aa4.25□□□□□ -1.73
SNX27-201ENST00000368838 PRR15LQ9BU68 103 aa4.25□□□□□ -1.73
SNX27-201ENST00000368838 MT2AP02795 61 aa4.23□□□□□ -1.73
SNX27-201ENST00000368838 K7ERS5 55 aa4.22□□□□□ -1.73
SNX27-201ENST00000368838 FCGBPQ9Y6R7 5405 aaPredicted RBP4.22□□□□□ -1.73
SNX27-201ENST00000368838 A0A1B0GU69 56 aa4.21□□□□□ -1.73
SNX27-201ENST00000368838 MT1FP04733 61 aa4.21□□□□□ -1.74
SNX27-201ENST00000368838 Q5VV11 94 aa4.21□□□□□ -1.74
SNX27-201ENST00000368838 LCE1AQ5T7P2 110 aa4.2□□□□□ -1.74
SNX27-201ENST00000368838 MACF1Q9UPN3 7388 aaKnown RBP4.19□□□□□ -1.74
SNX27-201ENST00000368838 SYNE2Q8WXH0 6885 aaKnown RBP4.18□□□□□ -1.74
SNX27-201ENST00000368838 A6NED7 52 aa4.18□□□□□ -1.74
SNX27-201ENST00000368838 KRTAP10-10P60014 251 aa4.18□□□□□ -1.74
SNX27-201ENST00000368838 ADM2Q7Z4H4 148 aa4.18□□□□□ -1.74
SNX27-201ENST00000368838 NDUFAF8A1L188 74 aa4.16□□□□□ -1.74
SNX27-201ENST00000368838 A6NN06 94 aa4.14□□□□□ -1.75
SNX27-201ENST00000368838 UQCR11O14957 56 aa4.13□□□□□ -1.75
SNX27-201ENST00000368838 A0A1B0GU33 70 aa4.1□□□□□ -1.75
SNX27-201ENST00000368838 SPATA8Q6RVD6 105 aa4.1□□□□□ -1.75
SNX27-201ENST00000368838 M0QZ58 72 aa4.09□□□□□ -1.75
SNX27-201ENST00000368838 CRIPTQ9P021 101 aa4.09□□□□□ -1.75
SNX27-201ENST00000368838 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
SNX27-201ENST00000368838 P0C880 135 aa4.05□□□□□ -1.76
SNX27-201ENST00000368838 MIR22HGQ0VDD5 57 aa4.04□□□□□ -1.76
SNX27-201ENST00000368838 KRTAP19-6Q3LI70 58 aa4.02□□□□□ -1.77
SNX27-201ENST00000368838 ROMO1P60602 79 aa3.98□□□□□ -1.77
SNX27-201ENST00000368838 KRTAP13-4Q3LI77 160 aa3.96□□□□□ -1.77
SNX27-201ENST00000368838 SPRR2GQ9BYE4 73 aa3.96□□□□□ -1.77
SNX27-201ENST00000368838 R4GN34 69 aa3.96□□□□□ -1.77
SNX27-201ENST00000368838 NEBP20929 6669 aa3.93□□□□□ -1.78
SNX27-201ENST00000368838 KRTAP6-3Q3LI67 103 aa3.92□□□□□ -1.78
SNX27-201ENST00000368838 A8MU10 97 aa3.9□□□□□ -1.79
SNX27-201ENST00000368838 KRTAP12-1P59990 96 aa3.87□□□□□ -1.79
SNX27-201ENST00000368838 KRTAP19-8Q3LI54 63 aa3.87□□□□□ -1.79
SNX27-201ENST00000368838 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.8
SNX27-201ENST00000368838 MT3P25713 68 aa3.82□□□□□ -1.8
SNX27-201ENST00000368838 MT1BP07438 61 aa3.81□□□□□ -1.8
SNX27-201ENST00000368838 KRTAP12-2P59991 146 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 229.8 ms