RNA–Protein interactions for RNA: ENST00000368547.3

ECHS1-201, Transcript of enoyl-CoA hydratase, short chain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ECHS1, Length 1,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHS1-201ENST00000368547 LCE2AQ5TA79 106 aaPredicted RBP14.68□□□□□ -0.06
ECHS1-201ENST00000368547 FLGP20930 4061 aaPredicted RBP14.67□□□□□ -0.06
ECHS1-201ENST00000368547 H1FX-AS1Q4G0G2 97 aa14.62□□□□□ -0.07
ECHS1-201ENST00000368547 CHKB-CPT1BH3BT56 60 aa14.57□□□□□ -0.08
ECHS1-201ENST00000368547 M0R2T5 61 aa14.54□□□□□ -0.08
ECHS1-201ENST00000368547 SMIM26A0A096LP01 95 aa14.48□□□□□ -0.09
ECHS1-201ENST00000368547 SPTSSBQ8NFR3 76 aa14.4□□□□□ -0.1
ECHS1-201ENST00000368547 S4R3F8 94 aa14.39□□□□□ -0.11
ECHS1-201ENST00000368547 LCA10Q71F78 164 aa14.33□□□□□ -0.12
ECHS1-201ENST00000368547 KRTAP10-6P60371 365 aaPredicted RBP14.29□□□□□ -0.12
ECHS1-201ENST00000368547 KRTAP3-3Q9BYR6 98 aa14.28□□□□□ -0.12
ECHS1-201ENST00000368547 Q1T7F1 81 aa14.26□□□□□ -0.13
ECHS1-201ENST00000368547 V9GYY9 64 aa14.26□□□□□ -0.13
ECHS1-201ENST00000368547 LORP23490 312 aaPredicted RBP14.23□□□□□ -0.13
ECHS1-201ENST00000368547 LINC01558Q9Y6Z2 57 aa14.18□□□□□ -0.14
ECHS1-201ENST00000368547 CSAG1Q6PB30 78 aa14.11□□□□□ -0.15
ECHS1-201ENST00000368547 KRTAP9-8Q9BYQ0 159 aa14.06□□□□□ -0.16
ECHS1-201ENST00000368547 KRTAP9-2Q9BYQ4 174 aa14.03□□□□□ -0.16
ECHS1-201ENST00000368547 A0A1B0GU69 56 aa13.96□□□□□ -0.17
ECHS1-201ENST00000368547 MT2AP02795 61 aa13.95□□□□□ -0.18
ECHS1-201ENST00000368547 PRR15LQ9BU68 103 aa13.95□□□□□ -0.18
ECHS1-201ENST00000368547 SEC61GP60059 68 aa13.94□□□□□ -0.18
ECHS1-201ENST00000368547 PSPHP1O15172 72 aa13.9□□□□□ -0.18
ECHS1-201ENST00000368547 H0YAA0 97 aa13.86□□□□□ -0.19
ECHS1-201ENST00000368547 MT1FP04733 61 aa13.86□□□□□ -0.19
ECHS1-201ENST00000368547 Q5VV11 94 aa13.83□□□□□ -0.2
ECHS1-201ENST00000368547 KRTAP10-10P60014 251 aa13.82□□□□□ -0.2
ECHS1-201ENST00000368547 KRTAP3-2Q9BYR7 98 aa13.75□□□□□ -0.21
ECHS1-201ENST00000368547 ADM2Q7Z4H4 148 aa13.7□□□□□ -0.22
ECHS1-201ENST00000368547 LCE2DQ5TA82 110 aaPredicted RBP13.66□□□□□ -0.22
ECHS1-201ENST00000368547 P0C880 135 aa13.6□□□□□ -0.23
ECHS1-201ENST00000368547 KRTAP9-3Q9BYQ3 159 aa13.58□□□□□ -0.24
ECHS1-201ENST00000368547 A0A1B0GU33 70 aa13.57□□□□□ -0.24
ECHS1-201ENST00000368547 UQCR11O14957 56 aa13.55□□□□□ -0.24
ECHS1-201ENST00000368547 FSIP2Q5CZC0 6907 aa13.54□□□□□ -0.24
ECHS1-201ENST00000368547 KRTAP9-6A0A140TA67 174 aa13.52□□□□□ -0.25
ECHS1-201ENST00000368547 A6NED7 52 aa13.52□□□□□ -0.25
ECHS1-201ENST00000368547 CRIPTQ9P021 101 aa13.36□□□□□ -0.27
ECHS1-201ENST00000368547 MIR22HGQ0VDD5 57 aa13.35□□□□□ -0.27
ECHS1-201ENST00000368547 SPATA8Q6RVD6 105 aa13.35□□□□□ -0.27
ECHS1-201ENST00000368547 M0QZ58 72 aa13.35□□□□□ -0.27
ECHS1-201ENST00000368547 LCE2BO14633 110 aa13.34□□□□□ -0.27
ECHS1-201ENST00000368547 KRTAP19-1Q8IUB9 90 aa13.33□□□□□ -0.28
ECHS1-201ENST00000368547 CDC42SE1Q9NRR8 79 aa13.32□□□□□ -0.28
ECHS1-201ENST00000368547 SPRR2GQ9BYE4 73 aa13.28□□□□□ -0.28
ECHS1-201ENST00000368547 KRTAP13-4Q3LI77 160 aa13.28□□□□□ -0.28
ECHS1-201ENST00000368547 CRCT1Q9UGL9 99 aa13.27□□□□□ -0.29
ECHS1-201ENST00000368547 BRK1Q8WUW1 75 aa13.26□□□□□ -0.29
ECHS1-201ENST00000368547 R4GN34 69 aa13.26□□□□□ -0.29
ECHS1-201ENST00000368547 USH2AO75445 5202 aa13.16□□□□□ -0.3
ECHS1-201ENST00000368547 A8MU10 97 aa13.1□□□□□ -0.31
ECHS1-201ENST00000368547 KRTAP19-8Q3LI54 63 aa13.05□□□□□ -0.32
ECHS1-201ENST00000368547 A0A0D9SG42 100 aa12.99□□□□□ -0.33
ECHS1-201ENST00000368547 PRO0628Q9UI54 55 aa12.98□□□□□ -0.33
ECHS1-201ENST00000368547 MT1BP07438 61 aa12.95□□□□□ -0.34
ECHS1-201ENST00000368547 LINC01554Q52M75 96 aa12.91□□□□□ -0.34
ECHS1-201ENST00000368547 A6NN06 94 aa12.88□□□□□ -0.35
ECHS1-201ENST00000368547 SSPOA2VEC9 5147 aa12.88□□□□□ -0.35
ECHS1-201ENST00000368547 K7ERS5 55 aa12.81□□□□□ -0.36
ECHS1-201ENST00000368547 KRTAP12-1P59990 96 aa12.81□□□□□ -0.36
ECHS1-201ENST00000368547 KRTAP12-2P59991 146 aa12.74□□□□□ -0.37
ECHS1-201ENST00000368547 SPINT4Q6UDR6 99 aa12.72□□□□□ -0.37
ECHS1-201ENST00000368547 KRTAP19-6Q3LI70 58 aa12.7□□□□□ -0.38
ECHS1-201ENST00000368547 PLAC4Q8WY50 150 aa12.69□□□□□ -0.38
ECHS1-201ENST00000368547 PMAIP1Q13794 54 aa12.55□□□□□ -0.4
ECHS1-201ENST00000368547 FCGBPQ9Y6R7 5405 aaPredicted RBP12.51□□□□□ -0.41
ECHS1-201ENST00000368547 KRTAP10-5P60370 271 aa12.45□□□□□ -0.42
ECHS1-201ENST00000368547 CAMK2N1Q7Z7J9 78 aa12.38□□□□□ -0.43
ECHS1-201ENST00000368547 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.36□□□□□ -0.43
ECHS1-201ENST00000368547 MT1XP80297 61 aa12.36□□□□□ -0.43
ECHS1-201ENST00000368547 PRO2289Q9P1D8 64 aa12.32□□□□□ -0.44
ECHS1-201ENST00000368547 ROMO1P60602 79 aa12.24□□□□□ -0.45
ECHS1-201ENST00000368547 KRTAP9-7A8MTY7 169 aa12.17□□□□□ -0.46
ECHS1-201ENST00000368547 MACF1Q9UPN3 7388 aaKnown RBP12.14□□□□□ -0.47
ECHS1-201ENST00000368547 C10orf95Q9H7T3 257 aa12.11□□□□□ -0.47
ECHS1-201ENST00000368547 SYNE2Q8WXH0 6885 aaKnown RBP12.06□□□□□ -0.48
ECHS1-201ENST00000368547 KTN1-AS1Q86SY8 53 aa12.03□□□□□ -0.48
ECHS1-201ENST00000368547 KRTAP25-1Q3LHN0 102 aa11.86□□□□□ -0.51
ECHS1-201ENST00000368547 KRTAP10-7P60409 375 aaPredicted RBP11.83□□□□□ -0.52
ECHS1-201ENST00000368547 TNP1P09430 55 aa11.81□□□□□ -0.52
ECHS1-201ENST00000368547 KRTAP10-12P60413 245 aa11.73□□□□□ -0.53
ECHS1-201ENST00000368547 PRAC1Q96KF2 57 aa11.7□□□□□ -0.54
ECHS1-201ENST00000368547 KMT2DO14686 5537 aa11.62□□□□□ -0.55
ECHS1-201ENST00000368547 KRTAP4-8A0A0G2JLE6 195 aa11.57□□□□□ -0.56
ECHS1-201ENST00000368547 KRTAP4-8Q9BYQ9 185 aa11.57□□□□□ -0.56
ECHS1-201ENST00000368547 KRTAP6-3Q3LI67 103 aa11.57□□□□□ -0.56
ECHS1-201ENST00000368547 SVIPQ8NHG7 77 aa11.56□□□□□ -0.56
ECHS1-201ENST00000368547 KRTAP23-1A1A580 65 aa11.52□□□□□ -0.57
ECHS1-201ENST00000368547 KRTAP8-1Q8IUC2 63 aa11.46□□□□□ -0.57
ECHS1-201ENST00000368547 PP632Q6XCG6 107 aa11.46□□□□□ -0.58
ECHS1-201ENST00000368547 MUC12Q9UKN1 5478 aa11.35□□□□□ -0.59
ECHS1-201ENST00000368547 KRTAP5-9P26371 169 aa11.31□□□□□ -0.6
ECHS1-201ENST00000368547 NEBP20929 6669 aa11.27□□□□□ -0.6
ECHS1-201ENST00000368547 LCE3AQ5TA76 89 aa11.27□□□□□ -0.61
ECHS1-201ENST00000368547 SPRR2FQ96RM1 72 aa11.23□□□□□ -0.61
ECHS1-201ENST00000368547 MDN1Q9NU22 5596 aa11.05□□□□□ -0.64
ECHS1-201ENST00000368547 KRTAP19-7Q3SYF9 63 aa11.03□□□□□ -0.64
ECHS1-201ENST00000368547 KRTAP19-5Q3LI72 72 aa11□□□□□ -0.65
ECHS1-201ENST00000368547 MT1EP04732 61 aa10.88□□□□□ -0.67
ECHS1-201ENST00000368547 KRTAP12-3P60328 96 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms