RNA–Protein interactions for RNA: ENST00000368289.6

ECHDC1-202, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5 BASIC

Gene ECHDC1, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-202ENST00000368289 LIMD2Q9BT23 127 aa3.83□□□□□ -1.8
ECHDC1-202ENST00000368289 SSBP3-AS1Q7Z2R9 100 aa3.82□□□□□ -1.8
ECHDC1-202ENST00000368289 KRTAP11-1Q8IUC1 163 aa3.82□□□□□ -1.8
ECHDC1-202ENST00000368289 A0A1B0GVX0 72 aa3.81□□□□□ -1.8
ECHDC1-202ENST00000368289 C8orf17Q9NRJ1 99 aa3.81□□□□□ -1.8
ECHDC1-202ENST00000368289 C8orf87E5RJ46 101 aa3.8□□□□□ -1.8
ECHDC1-202ENST00000368289 DEFB116Q30KQ4 102 aa3.8□□□□□ -1.8
ECHDC1-202ENST00000368289 Q96NJ1 140 aa3.8□□□□□ -1.8
ECHDC1-202ENST00000368289 NEBP20929 6669 aa3.8□□□□□ -1.8
ECHDC1-202ENST00000368289 FAM229BQ4G0N7 80 aa3.79□□□□□ -1.8
ECHDC1-202ENST00000368289 MRPL34Q9BQ48 92 aaKnown RBP3.79□□□□□ -1.8
ECHDC1-202ENST00000368289 PSORS1C2Q9UIG4 136 aa3.79□□□□□ -1.8
ECHDC1-202ENST00000368289 A0A0G2JQZ4 141 aa3.78□□□□□ -1.8
ECHDC1-202ENST00000368289 LOC101927531A0A1B0GV80 90 aa3.78□□□□□ -1.8
ECHDC1-202ENST00000368289 CIRBP-AS1Q8TBR5 109 aa3.78□□□□□ -1.8
ECHDC1-202ENST00000368289 PANO1I0J062 215 aa3.77□□□□□ -1.81
ECHDC1-202ENST00000368289 IGLV7-43P04211 117 aa3.77□□□□□ -1.81
ECHDC1-202ENST00000368289 KRTAP10-8P60410 259 aa3.77□□□□□ -1.81
ECHDC1-202ENST00000368289 BRK1Q8WUW1 75 aa3.77□□□□□ -1.81
ECHDC1-202ENST00000368289 IGHV6-1A0A0B4J1U7 121 aa3.74□□□□□ -1.81
ECHDC1-202ENST00000368289 NDUFS5O43920 106 aa3.74□□□□□ -1.81
ECHDC1-202ENST00000368289 KRTAP10-6P60371 365 aaPredicted RBP3.74□□□□□ -1.81
ECHDC1-202ENST00000368289 COA5Q86WW8 74 aa3.72□□□□□ -1.81
ECHDC1-202ENST00000368289 LINC01558Q9Y6Z2 57 aa3.72□□□□□ -1.81
ECHDC1-202ENST00000368289 KRTAP16-1A8MUX0 517 aa3.71□□□□□ -1.82
ECHDC1-202ENST00000368289 ACYP2P14621 99 aa3.71□□□□□ -1.82
ECHDC1-202ENST00000368289 MUC12Q9UKN1 5478 aa3.7□□□□□ -1.82
ECHDC1-202ENST00000368289 PSPHP1O15172 72 aa3.7□□□□□ -1.82
ECHDC1-202ENST00000368289 PRR4Q16378 134 aa3.7□□□□□ -1.82
ECHDC1-202ENST00000368289 LINC00313P59037 77 aa3.69□□□□□ -1.82
ECHDC1-202ENST00000368289 RPS29P62273 56 aaKnown RBP3.69□□□□□ -1.82
ECHDC1-202ENST00000368289 Q5VV11 94 aa3.69□□□□□ -1.82
ECHDC1-202ENST00000368289 A8MUN3 132 aa3.68□□□□□ -1.82
ECHDC1-202ENST00000368289 KRTAP13-3Q3SY46 172 aa3.68□□□□□ -1.82
ECHDC1-202ENST00000368289 ATP11AUNQ6ZP68 121 aa3.68□□□□□ -1.82
ECHDC1-202ENST00000368289 RBM12B-AS1Q9P1G2 102 aa3.68□□□□□ -1.82
ECHDC1-202ENST00000368289 CHKB-CPT1BH3BT56 60 aa3.67□□□□□ -1.82
ECHDC1-202ENST00000368289 PCOTHQ58A44 107 aa3.67□□□□□ -1.82
ECHDC1-202ENST00000368289 SPAG11AQ6PDA7 123 aa3.66□□□□□ -1.82
ECHDC1-202ENST00000368289 PRR15LQ9BU68 103 aa3.66□□□□□ -1.82
ECHDC1-202ENST00000368289 SPINK1P00995 79 aa3.65□□□□□ -1.83
ECHDC1-202ENST00000368289 HRES1P13985 223 aa3.65□□□□□ -1.83
ECHDC1-202ENST00000368289 DMAC1Q96GE9 116 aa3.65□□□□□ -1.83
ECHDC1-202ENST00000368289 CDC42SE1Q9NRR8 79 aa3.65□□□□□ -1.83
ECHDC1-202ENST00000368289 SPINK6Q6UWN8 80 aa3.64□□□□□ -1.83
ECHDC1-202ENST00000368289 FLGP20930 4061 aaPredicted RBP3.64□□□□□ -1.83
ECHDC1-202ENST00000368289 A6NED7 52 aa3.63□□□□□ -1.83
ECHDC1-202ENST00000368289 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
ECHDC1-202ENST00000368289 ANAPC11Q9NYG5 84 aa3.63□□□□□ -1.83
ECHDC1-202ENST00000368289 Q5W150 140 aa3.62□□□□□ -1.83
ECHDC1-202ENST00000368289 GPR98Q8WXG9 6306 aa3.61□□□□□ -1.83
ECHDC1-202ENST00000368289 KRTAP13-2Q52LG2 175 aa3.6□□□□□ -1.83
ECHDC1-202ENST00000368289 KRTAP1-4P0C5Y4 121 aa3.59□□□□□ -1.83
ECHDC1-202ENST00000368289 LCE1EQ5T753 118 aa3.59□□□□□ -1.83
ECHDC1-202ENST00000368289 KTN1-AS1Q86SY8 53 aa3.59□□□□□ -1.83
ECHDC1-202ENST00000368289 TYMSOSQ8TAI1 123 aa3.59□□□□□ -1.83
ECHDC1-202ENST00000368289 KRTAP4-1Q9BYQ7 146 aa3.59□□□□□ -1.83
ECHDC1-202ENST00000368289 LCE1FQ5T754 118 aa3.58□□□□□ -1.84
ECHDC1-202ENST00000368289 SPTSSBQ8NFR3 76 aa3.58□□□□□ -1.84
ECHDC1-202ENST00000368289 LCA10Q71F78 164 aa3.57□□□□□ -1.84
ECHDC1-202ENST00000368289 A0A1B0GU69 56 aa3.56□□□□□ -1.84
ECHDC1-202ENST00000368289 KMT2DO14686 5537 aa3.55□□□□□ -1.84
ECHDC1-202ENST00000368289 C7orf65Q6ZTY9 151 aa3.55□□□□□ -1.84
ECHDC1-202ENST00000368289 MDN1Q9NU22 5596 aa3.54□□□□□ -1.84
ECHDC1-202ENST00000368289 KRTAP10-12P60413 245 aa3.54□□□□□ -1.84
ECHDC1-202ENST00000368289 KRTAP19-2Q3LHN2 52 aa3.54□□□□□ -1.84
ECHDC1-202ENST00000368289 LINC00304Q8N9R0 145 aa3.54□□□□□ -1.84
ECHDC1-202ENST00000368289 A6NN06 94 aa3.53□□□□□ -1.84
ECHDC1-202ENST00000368289 UQCR11O14957 56 aa3.53□□□□□ -1.84
ECHDC1-202ENST00000368289 SPATA8Q6RVD6 105 aa3.53□□□□□ -1.84
ECHDC1-202ENST00000368289 MT1HP80294 61 aa3.52□□□□□ -1.85
ECHDC1-202ENST00000368289 SPINK7P58062 85 aa3.51□□□□□ -1.85
ECHDC1-202ENST00000368289 C20orf166-AS1Q96NR2 134 aa3.51□□□□□ -1.85
ECHDC1-202ENST00000368289 A8MUU9 505 aa3.5□□□□□ -1.85
ECHDC1-202ENST00000368289 KRTAP6-3Q3LI67 103 aa3.49□□□□□ -1.85
ECHDC1-202ENST00000368289 KRTAP20-1Q3LI63 56 aa3.48□□□□□ -1.85
ECHDC1-202ENST00000368289 MIR22HGQ0VDD5 57 aa3.47□□□□□ -1.85
ECHDC1-202ENST00000368289 A8MU10 97 aa3.45□□□□□ -1.86
ECHDC1-202ENST00000368289 KRTAP10-5P60370 271 aa3.45□□□□□ -1.86
ECHDC1-202ENST00000368289 RETNLBQ9BQ08 111 aa3.45□□□□□ -1.86
ECHDC1-202ENST00000368289 LINC01554Q52M75 96 aa3.43□□□□□ -1.86
ECHDC1-202ENST00000368289 KRTAP5-11Q6L8G4 156 aa3.4□□□□□ -1.87
ECHDC1-202ENST00000368289 CAMK2N1Q7Z7J9 78 aa3.4□□□□□ -1.87
ECHDC1-202ENST00000368289 COX6B2Q6YFQ2 88 aa3.39□□□□□ -1.87
ECHDC1-202ENST00000368289 A0A1B0GU33 70 aa3.36□□□□□ -1.87
ECHDC1-202ENST00000368289 K7ERS5 55 aa3.36□□□□□ -1.87
ECHDC1-202ENST00000368289 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
ECHDC1-202ENST00000368289 C9orf92A6NGG3 77 aa3.34□□□□□ -1.87
ECHDC1-202ENST00000368289 TPRXLQ17RH7 258 aa3.34□□□□□ -1.87
ECHDC1-202ENST00000368289 H1FX-AS1Q4G0G2 97 aa3.34□□□□□ -1.87
ECHDC1-202ENST00000368289 RPL37P61927 97 aaKnown RBP3.32□□□□□ -1.88
ECHDC1-202ENST00000368289 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
ECHDC1-202ENST00000368289 H0YAA0 97 aa3.29□□□□□ -1.88
ECHDC1-202ENST00000368289 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
ECHDC1-202ENST00000368289 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.25□□□□□ -1.89
ECHDC1-202ENST00000368289 S4R3F8 94 aa3.24□□□□□ -1.89
ECHDC1-202ENST00000368289 M0R2T5 61 aa3.23□□□□□ -1.89
ECHDC1-202ENST00000368289 KRTAP2-3P0C7H8 128 aa3.23□□□□□ -1.89
ECHDC1-202ENST00000368289 KRTAP2-4Q9BYR9 128 aa3.23□□□□□ -1.89
ECHDC1-202ENST00000368289 CSAG1Q6PB30 78 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms