RNA–Protein interactions for RNA: ENST00000368021.7

USF1-203, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-203ENST00000368021 MIR22HGQ0VDD5 57 aa6.72□□□□□ -1.33
USF1-203ENST00000368021 MRPL34Q9BQ48 92 aaKnown RBP6.72□□□□□ -1.33
USF1-203ENST00000368021 LPAP08519 4548 aa6.71□□□□□ -1.33
USF1-203ENST00000368021 PCOTHQ58A44 107 aa6.69□□□□□ -1.34
USF1-203ENST00000368021 KRTAP16-1A8MUX0 517 aa6.67□□□□□ -1.34
USF1-203ENST00000368021 CSAG1Q6PB30 78 aa6.66□□□□□ -1.34
USF1-203ENST00000368021 ROMO1P60602 79 aa6.63□□□□□ -1.35
USF1-203ENST00000368021 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
USF1-203ENST00000368021 DMAC1Q96GE9 116 aa6.62□□□□□ -1.35
USF1-203ENST00000368021 C9orf92A6NGG3 77 aa6.6□□□□□ -1.35
USF1-203ENST00000368021 RNF213Q63HN8 5207 aa6.59□□□□□ -1.35
USF1-203ENST00000368021 C20orf166-AS1Q96NR2 134 aa6.58□□□□□ -1.36
USF1-203ENST00000368021 A8MUU9 505 aa6.57□□□□□ -1.36
USF1-203ENST00000368021 KRTAP25-1Q3LHN0 102 aa6.56□□□□□ -1.36
USF1-203ENST00000368021 KRTAP13-3Q3SY46 172 aa6.56□□□□□ -1.36
USF1-203ENST00000368021 Q5W150 140 aa6.55□□□□□ -1.36
USF1-203ENST00000368021 TPRXLQ17RH7 258 aa6.52□□□□□ -1.37
USF1-203ENST00000368021 XP32Q5T750 250 aa6.49□□□□□ -1.37
USF1-203ENST00000368021 MUC2Q02817 5179 aa6.49□□□□□ -1.37
USF1-203ENST00000368021 RPL37P61927 97 aaKnown RBP6.46□□□□□ -1.38
USF1-203ENST00000368021 IGKV2-30P06310 120 aa6.44□□□□□ -1.38
USF1-203ENST00000368021 K7ERS5 55 aa6.42□□□□□ -1.38
USF1-203ENST00000368021 IGKV2D-30A0A075B6S6 120 aa6.39□□□□□ -1.39
USF1-203ENST00000368021 A0A0A0MQY5 61 aa6.32□□□□□ -1.4
USF1-203ENST00000368021 MUC17Q685J3 4493 aa6.31□□□□□ -1.4
USF1-203ENST00000368021 SEC61BP60468 96 aaKnown RBP6.28□□□□□ -1.4
USF1-203ENST00000368021 FAT4Q6V0I7 4981 aa6.23□□□□□ -1.41
USF1-203ENST00000368021 P0C880 135 aa6.23□□□□□ -1.41
USF1-203ENST00000368021 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
USF1-203ENST00000368021 A0A1B0GU33 70 aa6.18□□□□□ -1.42
USF1-203ENST00000368021 SPINT4Q6UDR6 99 aa6.18□□□□□ -1.42
USF1-203ENST00000368021 COX6B2Q6YFQ2 88 aa6.18□□□□□ -1.42
USF1-203ENST00000368021 H0YAA0 97 aa6.15□□□□□ -1.42
USF1-203ENST00000368021 KRTAP3-1Q9BYR8 98 aa6.15□□□□□ -1.43
USF1-203ENST00000368021 H1FX-AS1Q4G0G2 97 aa6.13□□□□□ -1.43
USF1-203ENST00000368021 KRTAP15-1Q3LI76 137 aa6.06□□□□□ -1.44
USF1-203ENST00000368021 NDUFAF8A1L188 74 aa6.06□□□□□ -1.44
USF1-203ENST00000368021 LCE2AQ5TA79 106 aaPredicted RBP6□□□□□ -1.45
USF1-203ENST00000368021 LUZP6Q538Z0 58 aa5.99□□□□□ -1.45
USF1-203ENST00000368021 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
USF1-203ENST00000368021 CRIPTQ9P021 101 aa5.98□□□□□ -1.45
USF1-203ENST00000368021 LCE2CQ5TA81 110 aa5.97□□□□□ -1.45
USF1-203ENST00000368021 S4R3F8 94 aa5.97□□□□□ -1.45
USF1-203ENST00000368021 KRTAP3-3Q9BYR6 98 aa5.95□□□□□ -1.46
USF1-203ENST00000368021 FLGP20930 4061 aaPredicted RBP5.92□□□□□ -1.46
USF1-203ENST00000368021 MT1HP80294 61 aa5.9□□□□□ -1.47
USF1-203ENST00000368021 M0R2T5 61 aa5.85□□□□□ -1.47
USF1-203ENST00000368021 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
USF1-203ENST00000368021 CAMK2N1Q7Z7J9 78 aa5.74□□□□□ -1.49
USF1-203ENST00000368021 LORP23490 312 aaPredicted RBP5.73□□□□□ -1.49
USF1-203ENST00000368021 KRTAP9-2Q9BYQ4 174 aa5.72□□□□□ -1.49
USF1-203ENST00000368021 KRTAP3-2Q9BYR7 98 aa5.72□□□□□ -1.49
USF1-203ENST00000368021 FSIP2Q5CZC0 6907 aa5.69□□□□□ -1.5
USF1-203ENST00000368021 PLAC4Q8WY50 150 aa5.6□□□□□ -1.51
USF1-203ENST00000368021 KRTAP9-8Q9BYQ0 159 aa5.6□□□□□ -1.51
USF1-203ENST00000368021 LCE2DQ5TA82 110 aaPredicted RBP5.6□□□□□ -1.51
USF1-203ENST00000368021 C10orf95Q9H7T3 257 aa5.6□□□□□ -1.51
USF1-203ENST00000368021 M0QZ58 72 aa5.56□□□□□ -1.52
USF1-203ENST00000368021 MT2AP02795 61 aa5.54□□□□□ -1.52
USF1-203ENST00000368021 KRTAP13-4Q3LI77 160 aa5.54□□□□□ -1.52
USF1-203ENST00000368021 A0A0D9SG42 100 aa5.53□□□□□ -1.52
USF1-203ENST00000368021 R4GN34 69 aa5.52□□□□□ -1.53
USF1-203ENST00000368021 MT1FP04733 61 aa5.51□□□□□ -1.53
USF1-203ENST00000368021 KRTAP10-10P60014 251 aa5.51□□□□□ -1.53
USF1-203ENST00000368021 PP632Q6XCG6 107 aa5.5□□□□□ -1.53
USF1-203ENST00000368021 USH2AO75445 5202 aa5.46□□□□□ -1.54
USF1-203ENST00000368021 KRTAP9-6A0A140TA67 174 aa5.45□□□□□ -1.54
USF1-203ENST00000368021 KRTAP12-1P59990 96 aa5.45□□□□□ -1.54
USF1-203ENST00000368021 KRTAP12-2P59991 146 aa5.43□□□□□ -1.54
USF1-203ENST00000368021 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
USF1-203ENST00000368021 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
USF1-203ENST00000368021 SPRR2GQ9BYE4 73 aa5.39□□□□□ -1.55
USF1-203ENST00000368021 SSPOA2VEC9 5147 aa5.38□□□□□ -1.55
USF1-203ENST00000368021 LCE2BO14633 110 aa5.37□□□□□ -1.55
USF1-203ENST00000368021 PRO2289Q9P1D8 64 aa5.37□□□□□ -1.55
USF1-203ENST00000368021 KRTAP19-1Q8IUB9 90 aa5.36□□□□□ -1.55
USF1-203ENST00000368021 INE1O15225 51 aa5.27□□□□□ -1.57
USF1-203ENST00000368021 KRTAP19-8Q3LI54 63 aa5.25□□□□□ -1.57
USF1-203ENST00000368021 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
USF1-203ENST00000368021 FCGBPQ9Y6R7 5405 aaPredicted RBP5.2□□□□□ -1.58
USF1-203ENST00000368021 MT1BP07438 61 aa5.16□□□□□ -1.58
USF1-203ENST00000368021 SPRR5A0A1B0GTR4 108 aa5.15□□□□□ -1.59
USF1-203ENST00000368021 KRTAP19-6Q3LI70 58 aa5.11□□□□□ -1.59
USF1-203ENST00000368021 MACF1Q9UPN3 7388 aaKnown RBP5.05□□□□□ -1.6
USF1-203ENST00000368021 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.04□□□□□ -1.6
USF1-203ENST00000368021 SYNE2Q8WXH0 6885 aaKnown RBP5□□□□□ -1.61
USF1-203ENST00000368021 MT1XP80297 61 aa5□□□□□ -1.61
USF1-203ENST00000368021 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
USF1-203ENST00000368021 KRTAP9-7A8MTY7 169 aa4.93□□□□□ -1.62
USF1-203ENST00000368021 TNP1P09430 55 aa4.92□□□□□ -1.62
USF1-203ENST00000368021 KMT2DO14686 5537 aa4.81□□□□□ -1.64
USF1-203ENST00000368021 KRTAP10-7P60409 375 aaPredicted RBP4.77□□□□□ -1.65
USF1-203ENST00000368021 KRTAP10-12P60413 245 aa4.75□□□□□ -1.65
USF1-203ENST00000368021 MUC12Q9UKN1 5478 aa4.74□□□□□ -1.65
USF1-203ENST00000368021 KRTAP6-3Q3LI67 103 aa4.73□□□□□ -1.65
USF1-203ENST00000368021 LCE3AQ5TA76 89 aa4.69□□□□□ -1.66
USF1-203ENST00000368021 MDN1Q9NU22 5596 aa4.63□□□□□ -1.67
USF1-203ENST00000368021 KRTAP8-1Q8IUC2 63 aa4.62□□□□□ -1.67
USF1-203ENST00000368021 KRTAP4-8A0A0G2JLE6 195 aa4.61□□□□□ -1.67
USF1-203ENST00000368021 KRTAP4-8Q9BYQ9 185 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 191.4 ms