RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 NDUFC1O43677 76 aa6.29□□□□□ -1.4
MRPL55-209ENST00000366735 SNURFQ9Y675 71 aa6.29□□□□□ -1.4
MRPL55-209ENST00000366735 LINC00208Q96KT6 92 aa6.28□□□□□ -1.4
MRPL55-209ENST00000366735 RBM12B-AS1Q9P1G2 102 aa6.28□□□□□ -1.4
MRPL55-209ENST00000366735 C1orf64Q8NEQ6 169 aa6.27□□□□□ -1.41
MRPL55-209ENST00000366735 CYSTM1Q9H1C7 97 aa6.27□□□□□ -1.41
MRPL55-209ENST00000366735 LOC101927531A0A1B0GV80 90 aa6.26□□□□□ -1.41
MRPL55-209ENST00000366735 H7BZZ5 65 aa6.25□□□□□ -1.41
MRPL55-209ENST00000366735 IGKV2-30P06310 120 aa6.24□□□□□ -1.41
MRPL55-209ENST00000366735 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
MRPL55-209ENST00000366735 USH2AO75445 5202 aa6.23□□□□□ -1.41
MRPL55-209ENST00000366735 MT2AP02795 61 aa6.21□□□□□ -1.42
MRPL55-209ENST00000366735 TMEM258P61165 79 aa6.21□□□□□ -1.42
MRPL55-209ENST00000366735 CYP4F30PQ9H0H9 118 aa6.21□□□□□ -1.42
MRPL55-209ENST00000366735 KRTAP19-1Q8IUB9 90 aa6.19□□□□□ -1.42
MRPL55-209ENST00000366735 KRTAP9-4Q9BYQ2 154 aa6.19□□□□□ -1.42
MRPL55-209ENST00000366735 KRTAP10-10P60014 251 aa6.17□□□□□ -1.42
MRPL55-209ENST00000366735 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
MRPL55-209ENST00000366735 SPANXA2-OT1Q8N9U9 137 aa6.16□□□□□ -1.42
MRPL55-209ENST00000366735 MT1FP04733 61 aa6.15□□□□□ -1.42
MRPL55-209ENST00000366735 HRES1P13985 223 aa6.15□□□□□ -1.42
MRPL55-209ENST00000366735 ATP5EP56381 51 aaPredicted RBP6.15□□□□□ -1.42
MRPL55-209ENST00000366735 C7orf65Q6ZTY9 151 aa6.15□□□□□ -1.42
MRPL55-209ENST00000366735 IGKV2D-30A0A075B6S6 120 aa6.13□□□□□ -1.43
MRPL55-209ENST00000366735 FCGBPQ9Y6R7 5405 aaPredicted RBP6.12□□□□□ -1.43
MRPL55-209ENST00000366735 KRTAP9-3Q9BYQ3 159 aa6.11□□□□□ -1.43
MRPL55-209ENST00000366735 SPINK7P58062 85 aa6.1□□□□□ -1.43
MRPL55-209ENST00000366735 KRTAP9-9Q9BYP9 154 aa6.1□□□□□ -1.43
MRPL55-209ENST00000366735 V9GYY9 64 aa6.04□□□□□ -1.44
MRPL55-209ENST00000366735 RPS28P62857 69 aaKnown RBP6.03□□□□□ -1.44
MRPL55-209ENST00000366735 DMAC1Q96GE9 116 aa6.02□□□□□ -1.45
MRPL55-209ENST00000366735 SERP1Q9Y6X1 66 aa6.02□□□□□ -1.45
MRPL55-209ENST00000366735 KRTAP19-6Q3LI70 58 aa6□□□□□ -1.45
MRPL55-209ENST00000366735 KRTAP4-12Q9BQ66 201 aa6□□□□□ -1.45
MRPL55-209ENST00000366735 MACF1Q9UPN3 7388 aaKnown RBP6□□□□□ -1.45
MRPL55-209ENST00000366735 A8MUN3 132 aa5.99□□□□□ -1.45
MRPL55-209ENST00000366735 C4orf26Q17RF5 130 aa5.98□□□□□ -1.45
MRPL55-209ENST00000366735 LOC100996750A0A140TA64 210 aa5.96□□□□□ -1.46
MRPL55-209ENST00000366735 ACYP2P14621 99 aa5.96□□□□□ -1.46
MRPL55-209ENST00000366735 KRTAP4-6Q9BYQ5 205 aa5.96□□□□□ -1.46
MRPL55-209ENST00000366735 LCE5AQ5TCM9 118 aa5.93□□□□□ -1.46
MRPL55-209ENST00000366735 COA5Q86WW8 74 aa5.93□□□□□ -1.46
MRPL55-209ENST00000366735 SYNE2Q8WXH0 6885 aaKnown RBP5.89□□□□□ -1.47
MRPL55-209ENST00000366735 SMIM26A0A096LP01 95 aa5.86□□□□□ -1.47
MRPL55-209ENST00000366735 KRTAP6-3Q3LI67 103 aa5.86□□□□□ -1.47
MRPL55-209ENST00000366735 H1FX-AS1Q4G0G2 97 aa5.86□□□□□ -1.47
MRPL55-209ENST00000366735 KRTAP4-8Q9BYQ9 185 aa5.85□□□□□ -1.47
MRPL55-209ENST00000366735 CHKB-CPT1BH3BT56 60 aa5.84□□□□□ -1.47
MRPL55-209ENST00000366735 NDUFAF8A1L188 74 aa5.81□□□□□ -1.48
MRPL55-209ENST00000366735 SPTSSBQ8NFR3 76 aa5.77□□□□□ -1.49
MRPL55-209ENST00000366735 Q1T7F1 81 aa5.76□□□□□ -1.49
MRPL55-209ENST00000366735 S4R3F8 94 aa5.74□□□□□ -1.49
MRPL55-209ENST00000366735 LCA10Q71F78 164 aa5.73□□□□□ -1.49
MRPL55-209ENST00000366735 LINC01558Q9Y6Z2 57 aa5.71□□□□□ -1.5
MRPL55-209ENST00000366735 A6NN06 94 aa5.69□□□□□ -1.5
MRPL55-209ENST00000366735 Q5VV11 94 aa5.66□□□□□ -1.5
MRPL55-209ENST00000366735 CSAG1Q6PB30 78 aa5.65□□□□□ -1.5
MRPL55-209ENST00000366735 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
MRPL55-209ENST00000366735 PRR15LQ9BU68 103 aa5.61□□□□□ -1.51
MRPL55-209ENST00000366735 A0A1B0GU69 56 aa5.6□□□□□ -1.51
MRPL55-209ENST00000366735 MUC12Q9UKN1 5478 aa5.59□□□□□ -1.51
MRPL55-209ENST00000366735 PSPHP1O15172 72 aa5.59□□□□□ -1.51
MRPL55-209ENST00000366735 MT1BP07438 61 aa5.57□□□□□ -1.52
MRPL55-209ENST00000366735 KRTAP20-1Q3LI63 56 aa5.57□□□□□ -1.52
MRPL55-209ENST00000366735 SPRR2GQ9BYE4 73 aa5.57□□□□□ -1.52
MRPL55-209ENST00000366735 NEBP20929 6669 aa5.57□□□□□ -1.52
MRPL55-209ENST00000366735 H0YAA0 97 aa5.56□□□□□ -1.52
MRPL55-209ENST00000366735 KRTAP19-8Q3LI54 63 aa5.56□□□□□ -1.52
MRPL55-209ENST00000366735 KRTAP10-5P60370 271 aa5.54□□□□□ -1.52
MRPL55-209ENST00000366735 CAMK2N1Q7Z7J9 78 aa5.5□□□□□ -1.53
MRPL55-209ENST00000366735 KRTAP5-9P26371 169 aa5.49□□□□□ -1.53
MRPL55-209ENST00000366735 CRIPTQ9P021 101 aa5.48□□□□□ -1.53
MRPL55-209ENST00000366735 ADM2Q7Z4H4 148 aa5.47□□□□□ -1.53
MRPL55-209ENST00000366735 A0A1B0GU33 70 aa5.45□□□□□ -1.54
MRPL55-209ENST00000366735 UQCR11O14957 56 aa5.45□□□□□ -1.54
MRPL55-209ENST00000366735 P0C880 135 aa5.45□□□□□ -1.54
MRPL55-209ENST00000366735 PRO0628Q9UI54 55 aa5.45□□□□□ -1.54
MRPL55-209ENST00000366735 A6NED7 52 aa5.43□□□□□ -1.54
MRPL55-209ENST00000366735 LCE1AQ5T7P2 110 aa5.4□□□□□ -1.54
MRPL55-209ENST00000366735 SPATA8Q6RVD6 105 aa5.39□□□□□ -1.55
MRPL55-209ENST00000366735 KMT2DO14686 5537 aa5.37□□□□□ -1.55
MRPL55-209ENST00000366735 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
MRPL55-209ENST00000366735 CDC42SE1Q9NRR8 79 aa5.37□□□□□ -1.55
MRPL55-209ENST00000366735 MDN1Q9NU22 5596 aa5.36□□□□□ -1.55
MRPL55-209ENST00000366735 M0QZ58 72 aa5.36□□□□□ -1.55
MRPL55-209ENST00000366735 KRTAP2-3P0C7H8 128 aa5.35□□□□□ -1.55
MRPL55-209ENST00000366735 KRTAP2-4Q9BYR9 128 aa5.35□□□□□ -1.55
MRPL55-209ENST00000366735 BRK1Q8WUW1 75 aa5.34□□□□□ -1.55
MRPL55-209ENST00000366735 PRO2289Q9P1D8 64 aa5.34□□□□□ -1.55
MRPL55-209ENST00000366735 KRTAP13-4Q3LI77 160 aa5.33□□□□□ -1.56
MRPL55-209ENST00000366735 LCE1DQ5T752 114 aa5.3□□□□□ -1.56
MRPL55-209ENST00000366735 SPRR2FQ96RM1 72 aa5.3□□□□□ -1.56
MRPL55-209ENST00000366735 SPRR2EP22531 72 aa5.29□□□□□ -1.56
MRPL55-209ENST00000366735 SPRR2BP35325 72 aa5.29□□□□□ -1.56
MRPL55-209ENST00000366735 SPRR2AP35326 72 aa5.29□□□□□ -1.56
MRPL55-209ENST00000366735 R4GN34 69 aa5.29□□□□□ -1.56
MRPL55-209ENST00000366735 A8MU10 97 aa5.28□□□□□ -1.56
MRPL55-209ENST00000366735 PLAC4Q8WY50 150 aa5.24□□□□□ -1.57
MRPL55-209ENST00000366735 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
MRPL55-209ENST00000366735 A0A0D9SG42 100 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms