RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 KRTAP16-1A8MUX0 517 aa3.76□□□□□ -1.81
RAB5B-201ENST00000360299 PLAC4Q8WY50 150 aa3.76□□□□□ -1.81
RAB5B-201ENST00000360299 VPS13BQ7Z7G8 4022 aa3.75□□□□□ -1.81
RAB5B-201ENST00000360299 PKHD1P08F94 4074 aa3.73□□□□□ -1.81
RAB5B-201ENST00000360299 KRTAP10-10P60014 251 aa3.71□□□□□ -1.81
RAB5B-201ENST00000360299 KRTAP13-3Q3SY46 172 aa3.71□□□□□ -1.82
RAB5B-201ENST00000360299 SACSQ9NZJ4 4579 aa3.7□□□□□ -1.82
RAB5B-201ENST00000360299 A6NN06 94 aa3.67□□□□□ -1.82
RAB5B-201ENST00000360299 A8MU10 97 aa3.65□□□□□ -1.82
RAB5B-201ENST00000360299 MT1HL1P0DM35 61 aa3.62□□□□□ -1.83
RAB5B-201ENST00000360299 DYNC1H1Q14204 4646 aaKnown RBP3.61□□□□□ -1.83
RAB5B-201ENST00000360299 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
RAB5B-201ENST00000360299 APOBP04114 4563 aaKnown RBP3.6□□□□□ -1.83
RAB5B-201ENST00000360299 FAT1Q14517 4588 aa3.59□□□□□ -1.83
RAB5B-201ENST00000360299 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.84
RAB5B-201ENST00000360299 TNP1P09430 55 aa3.57□□□□□ -1.84
RAB5B-201ENST00000360299 KMT2CQ8NEZ4 4911 aaKnown RBP3.57□□□□□ -1.84
RAB5B-201ENST00000360299 RYR2Q92736 4967 aa3.56□□□□□ -1.84
RAB5B-201ENST00000360299 PP632Q6XCG6 107 aa3.54□□□□□ -1.84
RAB5B-201ENST00000360299 H0YAA0 97 aa3.53□□□□□ -1.84
RAB5B-201ENST00000360299 NDUFAF8A1L188 74 aa3.52□□□□□ -1.85
RAB5B-201ENST00000360299 KRTAP10-4P60372 401 aaPredicted RBP3.5□□□□□ -1.85
RAB5B-201ENST00000360299 TNXBP22105 4242 aa3.49□□□□□ -1.85
RAB5B-201ENST00000360299 P0C880 135 aa3.48□□□□□ -1.85
RAB5B-201ENST00000360299 RYR3Q15413 4870 aa3.48□□□□□ -1.85
RAB5B-201ENST00000360299 LRP1Q07954 4544 aaKnown RBP3.47□□□□□ -1.85
RAB5B-201ENST00000360299 HSPG2P98160 4391 aa3.47□□□□□ -1.85
RAB5B-201ENST00000360299 KRTAP17-1Q9BYP8 105 aa3.46□□□□□ -1.86
RAB5B-201ENST00000360299 PRO2289Q9P1D8 64 aa3.46□□□□□ -1.86
RAB5B-201ENST00000360299 FAT3Q8TDW7 4589 aa3.45□□□□□ -1.86
RAB5B-201ENST00000360299 KRTAP3-1Q9BYR8 98 aa3.42□□□□□ -1.86
RAB5B-201ENST00000360299 BIRC6Q9NR09 4857 aa3.39□□□□□ -1.87
RAB5B-201ENST00000360299 RYR1P21817 5038 aa3.38□□□□□ -1.87
RAB5B-201ENST00000360299 MYCBP2O75592 4640 aa3.37□□□□□ -1.87
RAB5B-201ENST00000360299 LPAP08519 4548 aa3.37□□□□□ -1.87
RAB5B-201ENST00000360299 C10orf95Q9H7T3 257 aa3.34□□□□□ -1.87
RAB5B-201ENST00000360299 EPPK1P58107 5090 aaKnown RBP3.34□□□□□ -1.87
RAB5B-201ENST00000360299 KRTAP12-1P59990 96 aa3.32□□□□□ -1.88
RAB5B-201ENST00000360299 KIAA1109Q2LD37 5005 aa3.32□□□□□ -1.88
RAB5B-201ENST00000360299 KRTAP10-6P60371 365 aaPredicted RBP3.31□□□□□ -1.88
RAB5B-201ENST00000360299 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
RAB5B-201ENST00000360299 KRTAP13-4Q3LI77 160 aa3.3□□□□□ -1.88
RAB5B-201ENST00000360299 ABCA13Q86UQ4 5058 aa3.28□□□□□ -1.88
RAB5B-201ENST00000360299 LRP2P98164 4655 aa3.24□□□□□ -1.89
RAB5B-201ENST00000360299 KRTAP3-3Q9BYR6 98 aa3.24□□□□□ -1.89
RAB5B-201ENST00000360299 HERC2O95714 4834 aa3.22□□□□□ -1.89
RAB5B-201ENST00000360299 KRTAP3-2Q9BYR7 98 aa3.22□□□□□ -1.89
RAB5B-201ENST00000360299 LORP23490 312 aaPredicted RBP3.21□□□□□ -1.9
RAB5B-201ENST00000360299 MT1HP80294 61 aa3.18□□□□□ -1.9
RAB5B-201ENST00000360299 KRTAP4-1Q9BYQ7 146 aa3.17□□□□□ -1.9
RAB5B-201ENST00000360299 MUC17Q685J3 4493 aa3.15□□□□□ -1.91
RAB5B-201ENST00000360299 KRTAP23-1A1A580 65 aa3.09□□□□□ -1.92
RAB5B-201ENST00000360299 PCLOQ9Y6V0 5065 aa3.08□□□□□ -1.92
RAB5B-201ENST00000360299 MUC2Q02817 5179 aa3.08□□□□□ -1.92
RAB5B-201ENST00000360299 KRTAP15-1Q3LI76 137 aa3.04□□□□□ -1.92
RAB5B-201ENST00000360299 MT2AP02795 61 aa3.03□□□□□ -1.92
RAB5B-201ENST00000360299 KRTAP8-1Q8IUC2 63 aa3.02□□□□□ -1.93
RAB5B-201ENST00000360299 KRTAP10-12P60413 245 aa3.02□□□□□ -1.93
RAB5B-201ENST00000360299 HERC1Q15751 4861 aa3.01□□□□□ -1.93
RAB5B-201ENST00000360299 KRTAP9-2Q9BYQ4 174 aa3□□□□□ -1.93
RAB5B-201ENST00000360299 CRCT1Q9UGL9 99 aa2.99□□□□□ -1.93
RAB5B-201ENST00000360299 FLGP20930 4061 aaPredicted RBP2.98□□□□□ -1.93
RAB5B-201ENST00000360299 MT1FP04733 61 aa2.98□□□□□ -1.93
RAB5B-201ENST00000360299 KRTAP19-2Q3LHN2 52 aa2.98□□□□□ -1.93
RAB5B-201ENST00000360299 LCE2DQ5TA82 110 aaPredicted RBP2.95□□□□□ -1.94
RAB5B-201ENST00000360299 HMCN2Q8NDA2 5059 aa2.94□□□□□ -1.94
RAB5B-201ENST00000360299 SPRR2FQ96RM1 72 aa2.94□□□□□ -1.94
RAB5B-201ENST00000360299 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
RAB5B-201ENST00000360299 KRTAP9-6A0A140TA67 174 aa2.93□□□□□ -1.94
RAB5B-201ENST00000360299 SPRR2GQ9BYE4 73 aa2.93□□□□□ -1.94
RAB5B-201ENST00000360299 FAT4Q6V0I7 4981 aa2.9□□□□□ -1.94
RAB5B-201ENST00000360299 LCE3AQ5TA76 89 aa2.89□□□□□ -1.95
RAB5B-201ENST00000360299 INE1O15225 51 aa2.88□□□□□ -1.95
RAB5B-201ENST00000360299 SPRR2EP22531 72 aa2.84□□□□□ -1.95
RAB5B-201ENST00000360299 SPRR2BP35325 72 aa2.84□□□□□ -1.95
RAB5B-201ENST00000360299 SPRR2AP35326 72 aa2.84□□□□□ -1.95
RAB5B-201ENST00000360299 KRTAP19-1Q8IUB9 90 aa2.84□□□□□ -1.95
RAB5B-201ENST00000360299 RNF213Q63HN8 5207 aa2.83□□□□□ -1.96
RAB5B-201ENST00000360299 UBR4Q5T4S7 5183 aa2.83□□□□□ -1.96
RAB5B-201ENST00000360299 FSIP2Q5CZC0 6907 aa2.81□□□□□ -1.96
RAB5B-201ENST00000360299 LCE2CQ5TA81 110 aa2.81□□□□□ -1.96
RAB5B-201ENST00000360299 KRTAP19-4Q3LI73 84 aa2.78□□□□□ -1.96
RAB5B-201ENST00000360299 KRTAP9-8Q9BYQ0 159 aa2.78□□□□□ -1.96
RAB5B-201ENST00000360299 KRTAP19-8Q3LI54 63 aa2.77□□□□□ -1.97
RAB5B-201ENST00000360299 SPRR2DP22532 72 aa2.75□□□□□ -1.97
RAB5B-201ENST00000360299 LCE2AQ5TA79 106 aaPredicted RBP2.73□□□□□ -1.97
RAB5B-201ENST00000360299 KRTAP9-3Q9BYQ3 159 aa2.72□□□□□ -1.97
RAB5B-201ENST00000360299 KRTAP10-7P60409 375 aaPredicted RBP2.71□□□□□ -1.98
RAB5B-201ENST00000360299 KRTAP10-5P60370 271 aa2.7□□□□□ -1.98
RAB5B-201ENST00000360299 KRTAP9-7A8MTY7 169 aa2.7□□□□□ -1.98
RAB5B-201ENST00000360299 LCE2BO14633 110 aa2.68□□□□□ -1.98
RAB5B-201ENST00000360299 MT1BP07438 61 aa2.64□□□□□ -1.99
RAB5B-201ENST00000360299 KRTAP19-5Q3LI72 72 aa2.63□□□□□ -1.99
RAB5B-201ENST00000360299 MT1XP80297 61 aa2.61□□□□□ -1.99
RAB5B-201ENST00000360299 LCE3CQ5T5A8 94 aa2.6□□□□□ -1.99
RAB5B-201ENST00000360299 USH2AO75445 5202 aa2.6□□□□□ -1.99
RAB5B-201ENST00000360299 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.59□□□□□ -2
RAB5B-201ENST00000360299 KRTAP19-6Q3LI70 58 aa2.59□□□□□ -2
RAB5B-201ENST00000360299 SYNE2Q8WXH0 6885 aaKnown RBP2.58□□□□□ -2
RAB5B-201ENST00000360299 KRTAP4-8A0A0G2JLE6 195 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms