RNA–Protein interactions for RNA: ENST00000360035.6

NXF4-201, Transcript of nuclear RNA export factor 4 pseudogene, humanhuman

TSL 2 BASIC

Gene NXF4, Length 3,617 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF4-201ENST00000360035 KRTAP4-5Q9BYR2 181 aa3.87□□□□□ -1.79
NXF4-201ENST00000360035 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
NXF4-201ENST00000360035 SEC61BP60468 96 aaKnown RBP3.86□□□□□ -1.79
NXF4-201ENST00000360035 KRTAP1-4P0C5Y4 121 aa3.85□□□□□ -1.79
NXF4-201ENST00000360035 KRTAP10-4P60372 401 aaPredicted RBP3.84□□□□□ -1.79
NXF4-201ENST00000360035 SPINT4Q6UDR6 99 aa3.84□□□□□ -1.79
NXF4-201ENST00000360035 KRTAP16-1A8MUX0 517 aa3.84□□□□□ -1.79
NXF4-201ENST00000360035 A0A1B0GU33 70 aa3.83□□□□□ -1.8
NXF4-201ENST00000360035 A8MUU9 505 aa3.82□□□□□ -1.8
NXF4-201ENST00000360035 RPS29P62273 56 aaKnown RBP3.81□□□□□ -1.8
NXF4-201ENST00000360035 ABCA13Q86UQ4 5058 aa3.81□□□□□ -1.8
NXF4-201ENST00000360035 MYCBP2O75592 4640 aa3.8□□□□□ -1.8
NXF4-201ENST00000360035 H0YAA0 97 aa3.8□□□□□ -1.8
NXF4-201ENST00000360035 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
NXF4-201ENST00000360035 PCLOQ9Y6V0 5065 aa3.76□□□□□ -1.81
NXF4-201ENST00000360035 A0A0D9SG42 100 aa3.75□□□□□ -1.81
NXF4-201ENST00000360035 H1FX-AS1Q4G0G2 97 aa3.75□□□□□ -1.81
NXF4-201ENST00000360035 P0C880 135 aa3.73□□□□□ -1.81
NXF4-201ENST00000360035 C20orf166-AS1Q96NR2 134 aa3.73□□□□□ -1.81
NXF4-201ENST00000360035 KRTAP3-3Q9BYR6 98 aa3.73□□□□□ -1.81
NXF4-201ENST00000360035 KRTAP3-2Q9BYR7 98 aa3.73□□□□□ -1.81
NXF4-201ENST00000360035 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
NXF4-201ENST00000360035 KRTAP10-8P60410 259 aa3.71□□□□□ -1.82
NXF4-201ENST00000360035 MT1HL1P0DM35 61 aa3.71□□□□□ -1.82
NXF4-201ENST00000360035 COX6B2Q6YFQ2 88 aa3.71□□□□□ -1.82
NXF4-201ENST00000360035 TNXBP22105 4242 aa3.68□□□□□ -1.82
NXF4-201ENST00000360035 LCE2DQ5TA82 110 aaPredicted RBP3.67□□□□□ -1.82
NXF4-201ENST00000360035 C10orf95Q9H7T3 257 aa3.67□□□□□ -1.82
NXF4-201ENST00000360035 HERC1Q15751 4861 aa3.66□□□□□ -1.82
NXF4-201ENST00000360035 RPL37P61927 97 aaKnown RBP3.65□□□□□ -1.82
NXF4-201ENST00000360035 S4R3F8 94 aa3.62□□□□□ -1.83
NXF4-201ENST00000360035 KRTAP3-1Q9BYR8 98 aa3.61□□□□□ -1.83
NXF4-201ENST00000360035 TPRXLQ17RH7 258 aa3.6□□□□□ -1.83
NXF4-201ENST00000360035 XP32Q5T750 250 aa3.55□□□□□ -1.84
NXF4-201ENST00000360035 HMCN2Q8NDA2 5059 aa3.53□□□□□ -1.84
NXF4-201ENST00000360035 LPAP08519 4548 aa3.53□□□□□ -1.84
NXF4-201ENST00000360035 LRP2P98164 4655 aa3.53□□□□□ -1.85
NXF4-201ENST00000360035 KRTAP13-4Q3LI77 160 aa3.52□□□□□ -1.85
NXF4-201ENST00000360035 KRTAP15-1Q3LI76 137 aa3.51□□□□□ -1.85
NXF4-201ENST00000360035 LUZP6Q538Z0 58 aa3.5□□□□□ -1.85
NXF4-201ENST00000360035 KRTAP10-6P60371 365 aaPredicted RBP3.47□□□□□ -1.85
NXF4-201ENST00000360035 KRTAP12-2P59991 146 aa3.46□□□□□ -1.86
NXF4-201ENST00000360035 UBR4Q5T4S7 5183 aa3.45□□□□□ -1.86
NXF4-201ENST00000360035 M0QZ58 72 aa3.44□□□□□ -1.86
NXF4-201ENST00000360035 R4GN34 69 aa3.43□□□□□ -1.86
NXF4-201ENST00000360035 MUC17Q685J3 4493 aa3.41□□□□□ -1.86
NXF4-201ENST00000360035 RNF213Q63HN8 5207 aa3.39□□□□□ -1.87
NXF4-201ENST00000360035 KRTAP12-1P59990 96 aa3.38□□□□□ -1.87
NXF4-201ENST00000360035 PLAC4Q8WY50 150 aa3.37□□□□□ -1.87
NXF4-201ENST00000360035 MUC2Q02817 5179 aa3.36□□□□□ -1.87
NXF4-201ENST00000360035 KRTAP23-1A1A580 65 aa3.36□□□□□ -1.87
NXF4-201ENST00000360035 CAMK2N1Q7Z7J9 78 aa3.32□□□□□ -1.88
NXF4-201ENST00000360035 KRTAP4-1Q9BYQ7 146 aa3.32□□□□□ -1.88
NXF4-201ENST00000360035 LCE2BO14633 110 aa3.27□□□□□ -1.89
NXF4-201ENST00000360035 FAT4Q6V0I7 4981 aa3.23□□□□□ -1.89
NXF4-201ENST00000360035 LCE2CQ5TA81 110 aa3.22□□□□□ -1.89
NXF4-201ENST00000360035 M0R2T5 61 aa3.18□□□□□ -1.9
NXF4-201ENST00000360035 KRTAP19-2Q3LHN2 52 aa3.18□□□□□ -1.9
NXF4-201ENST00000360035 PP632Q6XCG6 107 aa3.17□□□□□ -1.9
NXF4-201ENST00000360035 LORP23490 312 aaPredicted RBP3.14□□□□□ -1.91
NXF4-201ENST00000360035 MT1HP80294 61 aa3.14□□□□□ -1.91
NXF4-201ENST00000360035 TNP1P09430 55 aa3.13□□□□□ -1.91
NXF4-201ENST00000360035 FLGP20930 4061 aaPredicted RBP3.13□□□□□ -1.91
NXF4-201ENST00000360035 LCE2AQ5TA79 106 aaPredicted RBP3.11□□□□□ -1.91
NXF4-201ENST00000360035 PRO2289Q9P1D8 64 aa3.09□□□□□ -1.91
NXF4-201ENST00000360035 KRTAP10-10P60014 251 aa3□□□□□ -1.93
NXF4-201ENST00000360035 KRTAP9-8Q9BYQ0 159 aa2.99□□□□□ -1.93
NXF4-201ENST00000360035 MT2AP02795 61 aa2.98□□□□□ -1.93
NXF4-201ENST00000360035 SPRR5A0A1B0GTR4 108 aa2.97□□□□□ -1.93
NXF4-201ENST00000360035 MT1FP04733 61 aa2.96□□□□□ -1.94
NXF4-201ENST00000360035 FSIP2Q5CZC0 6907 aa2.91□□□□□ -1.94
NXF4-201ENST00000360035 KRTAP9-2Q9BYQ4 174 aa2.91□□□□□ -1.94
NXF4-201ENST00000360035 KRTAP9-3Q9BYQ3 159 aa2.88□□□□□ -1.95
NXF4-201ENST00000360035 SPRR2GQ9BYE4 73 aa2.88□□□□□ -1.95
NXF4-201ENST00000360035 INE1O15225 51 aa2.85□□□□□ -1.95
NXF4-201ENST00000360035 LCE3AQ5TA76 89 aa2.83□□□□□ -1.96
NXF4-201ENST00000360035 KRTAP19-1Q8IUB9 90 aa2.83□□□□□ -1.96
NXF4-201ENST00000360035 USH2AO75445 5202 aa2.83□□□□□ -1.96
NXF4-201ENST00000360035 CRCT1Q9UGL9 99 aa2.78□□□□□ -1.96
NXF4-201ENST00000360035 KRTAP9-6A0A140TA67 174 aa2.77□□□□□ -1.97
NXF4-201ENST00000360035 SSPOA2VEC9 5147 aa2.77□□□□□ -1.97
NXF4-201ENST00000360035 KRTAP10-12P60413 245 aa2.76□□□□□ -1.97
NXF4-201ENST00000360035 KRTAP19-8Q3LI54 63 aa2.75□□□□□ -1.97
NXF4-201ENST00000360035 MT1BP07438 61 aa2.75□□□□□ -1.97
NXF4-201ENST00000360035 KRTAP12-3P60328 96 aa2.74□□□□□ -1.97
NXF4-201ENST00000360035 KRTAP8-1Q8IUC2 63 aa2.72□□□□□ -1.97
NXF4-201ENST00000360035 KRTAP19-6Q3LI70 58 aa2.69□□□□□ -1.98
NXF4-201ENST00000360035 FCGBPQ9Y6R7 5405 aaPredicted RBP2.68□□□□□ -1.98
NXF4-201ENST00000360035 KRTAP10-5P60370 271 aa2.67□□□□□ -1.98
NXF4-201ENST00000360035 MT1XP80297 61 aa2.67□□□□□ -1.98
NXF4-201ENST00000360035 KRTAP10-7P60409 375 aaPredicted RBP2.62□□□□□ -1.99
NXF4-201ENST00000360035 MACF1Q9UPN3 7388 aaKnown RBP2.59□□□□□ -1.99
NXF4-201ENST00000360035 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.57□□□□□ -2
NXF4-201ENST00000360035 KRTAP19-5Q3LI72 72 aa2.56□□□□□ -2
NXF4-201ENST00000360035 SYNE2Q8WXH0 6885 aaKnown RBP2.54□□□□□ -2
NXF4-201ENST00000360035 KRTAP2-2Q9BYT5 123 aa2.54□□□□□ -2
NXF4-201ENST00000360035 KMT2DO14686 5537 aa2.54□□□□□ -2
NXF4-201ENST00000360035 LCE3CQ5T5A8 94 aa2.53□□□□□ -2
NXF4-201ENST00000360035 KRTAP9-7A8MTY7 169 aa2.5□□□□□ -2.01
NXF4-201ENST00000360035 KRTAP4-8A0A0G2JLE6 195 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms