RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 KRTAP19-2Q3LHN2 52 aa11.54□□□□□ -0.56
SDF4-202ENST00000360001 S4R3F8 94 aa11.48□□□□□ -0.57
SDF4-202ENST00000360001 LCA10Q71F78 164 aa11.47□□□□□ -0.57
SDF4-202ENST00000360001 KRTAP3-3Q9BYR6 98 aa11.44□□□□□ -0.58
SDF4-202ENST00000360001 SPTSSBQ8NFR3 76 aa11.4□□□□□ -0.58
SDF4-202ENST00000360001 Q1T7F1 81 aa11.39□□□□□ -0.59
SDF4-202ENST00000360001 FLGP20930 4061 aaPredicted RBP11.33□□□□□ -0.6
SDF4-202ENST00000360001 LINC01558Q9Y6Z2 57 aa11.32□□□□□ -0.6
SDF4-202ENST00000360001 V9GYY9 64 aa11.31□□□□□ -0.6
SDF4-202ENST00000360001 LCE2CQ5TA81 110 aa11.29□□□□□ -0.6
SDF4-202ENST00000360001 CSAG1Q6PB30 78 aa11.22□□□□□ -0.61
SDF4-202ENST00000360001 FAT4Q6V0I7 4981 aa11.21□□□□□ -0.62
SDF4-202ENST00000360001 PSPHP1O15172 72 aa11.19□□□□□ -0.62
SDF4-202ENST00000360001 PRR15LQ9BU68 103 aa11.19□□□□□ -0.62
SDF4-202ENST00000360001 A0A1B0GU69 56 aa11.15□□□□□ -0.62
SDF4-202ENST00000360001 Q5VV11 94 aa11.1□□□□□ -0.63
SDF4-202ENST00000360001 SEC61GP60059 68 aa11.08□□□□□ -0.64
SDF4-202ENST00000360001 MT1HP80294 61 aa11.05□□□□□ -0.64
SDF4-202ENST00000360001 KRTAP3-2Q9BYR7 98 aa11.02□□□□□ -0.65
SDF4-202ENST00000360001 KRTAP10-6P60371 365 aaPredicted RBP10.99□□□□□ -0.65
SDF4-202ENST00000360001 H0YAA0 97 aa10.98□□□□□ -0.65
SDF4-202ENST00000360001 ADM2Q7Z4H4 148 aa10.97□□□□□ -0.65
SDF4-202ENST00000360001 P0C880 135 aa10.92□□□□□ -0.66
SDF4-202ENST00000360001 M0R2T5 61 aa10.9□□□□□ -0.66
SDF4-202ENST00000360001 A0A1B0GU33 70 aa10.85□□□□□ -0.67
SDF4-202ENST00000360001 A6NED7 52 aa10.83□□□□□ -0.68
SDF4-202ENST00000360001 UQCR11O14957 56 aa10.79□□□□□ -0.68
SDF4-202ENST00000360001 KRTAP13-4Q3LI77 160 aa10.7□□□□□ -0.7
SDF4-202ENST00000360001 LORP23490 312 aaPredicted RBP10.68□□□□□ -0.7
SDF4-202ENST00000360001 SPATA8Q6RVD6 105 aa10.68□□□□□ -0.7
SDF4-202ENST00000360001 MIR22HGQ0VDD5 57 aa10.68□□□□□ -0.7
SDF4-202ENST00000360001 LCE2AQ5TA79 106 aaPredicted RBP10.67□□□□□ -0.7
SDF4-202ENST00000360001 BRK1Q8WUW1 75 aa10.66□□□□□ -0.7
SDF4-202ENST00000360001 KRTAP9-8Q9BYQ0 159 aa10.65□□□□□ -0.71
SDF4-202ENST00000360001 A8MU10 97 aa10.64□□□□□ -0.71
SDF4-202ENST00000360001 CDC42SE1Q9NRR8 79 aa10.64□□□□□ -0.71
SDF4-202ENST00000360001 MT2AP02795 61 aa10.6□□□□□ -0.71
SDF4-202ENST00000360001 M0QZ58 72 aa10.59□□□□□ -0.71
SDF4-202ENST00000360001 R4GN34 69 aa10.57□□□□□ -0.72
SDF4-202ENST00000360001 MT1FP04733 61 aa10.55□□□□□ -0.72
SDF4-202ENST00000360001 CRIPTQ9P021 101 aa10.5□□□□□ -0.73
SDF4-202ENST00000360001 KRTAP10-10P60014 251 aa10.48□□□□□ -0.73
SDF4-202ENST00000360001 A0A0D9SG42 100 aa10.45□□□□□ -0.74
SDF4-202ENST00000360001 PRO0628Q9UI54 55 aa10.39□□□□□ -0.75
SDF4-202ENST00000360001 LINC01554Q52M75 96 aa10.38□□□□□ -0.75
SDF4-202ENST00000360001 SPRR2GQ9BYE4 73 aa10.35□□□□□ -0.75
SDF4-202ENST00000360001 KRTAP19-1Q8IUB9 90 aa10.34□□□□□ -0.75
SDF4-202ENST00000360001 KRTAP12-1P59990 96 aa10.26□□□□□ -0.77
SDF4-202ENST00000360001 KRTAP9-3Q9BYQ3 159 aa10.26□□□□□ -0.77
SDF4-202ENST00000360001 KRTAP12-2P59991 146 aa10.24□□□□□ -0.77
SDF4-202ENST00000360001 SPINT4Q6UDR6 99 aa10.2□□□□□ -0.78
SDF4-202ENST00000360001 A6NN06 94 aa10.19□□□□□ -0.78
SDF4-202ENST00000360001 H3BS24 57 aa10.18□□□□□ -0.78
SDF4-202ENST00000360001 K7ERS5 55 aa10.17□□□□□ -0.78
SDF4-202ENST00000360001 A0A0A0MQY5 61 aa10.12□□□□□ -0.79
SDF4-202ENST00000360001 KRTAP19-8Q3LI54 63 aa10.08□□□□□ -0.8
SDF4-202ENST00000360001 PMAIP1Q13794 54 aa10.07□□□□□ -0.8
SDF4-202ENST00000360001 LCE2BO14633 110 aa9.99□□□□□ -0.81
SDF4-202ENST00000360001 MT1BP07438 61 aa9.97□□□□□ -0.81
SDF4-202ENST00000360001 PLAC4Q8WY50 150 aa9.95□□□□□ -0.82
SDF4-202ENST00000360001 CAMK2N1Q7Z7J9 78 aa9.88□□□□□ -0.83
SDF4-202ENST00000360001 USH2AO75445 5202 aa9.84□□□□□ -0.83
SDF4-202ENST00000360001 ROMO1P60602 79 aa9.77□□□□□ -0.84
SDF4-202ENST00000360001 C10orf95Q9H7T3 257 aa9.72□□□□□ -0.85
SDF4-202ENST00000360001 LCE2DQ5TA82 110 aaPredicted RBP9.7□□□□□ -0.86
SDF4-202ENST00000360001 MT1XP80297 61 aa9.63□□□□□ -0.87
SDF4-202ENST00000360001 KTN1-AS1Q86SY8 53 aa9.63□□□□□ -0.87
SDF4-202ENST00000360001 KRTAP10-5P60370 271 aa9.61□□□□□ -0.87
SDF4-202ENST00000360001 SSPOA2VEC9 5147 aa9.51□□□□□ -0.89
SDF4-202ENST00000360001 PRAC1Q96KF2 57 aa9.48□□□□□ -0.89
SDF4-202ENST00000360001 PRO2289Q9P1D8 64 aa9.48□□□□□ -0.89
SDF4-202ENST00000360001 FSIP2Q5CZC0 6907 aa9.43□□□□□ -0.9
SDF4-202ENST00000360001 KRTAP25-1Q3LHN0 102 aa9.41□□□□□ -0.9
SDF4-202ENST00000360001 TNP1P09430 55 aa9.39□□□□□ -0.91
SDF4-202ENST00000360001 KRTAP19-6Q3LI70 58 aa9.37□□□□□ -0.91
SDF4-202ENST00000360001 KRTAP9-2Q9BYQ4 174 aa9.36□□□□□ -0.91
SDF4-202ENST00000360001 KRTAP10-7P60409 375 aaPredicted RBP9.24□□□□□ -0.93
SDF4-202ENST00000360001 KRTAP10-12P60413 245 aa9.12□□□□□ -0.95
SDF4-202ENST00000360001 FCGBPQ9Y6R7 5405 aaPredicted RBP9.12□□□□□ -0.95
SDF4-202ENST00000360001 KRTAP23-1A1A580 65 aa9.09□□□□□ -0.95
SDF4-202ENST00000360001 PP632Q6XCG6 107 aa9.06□□□□□ -0.96
SDF4-202ENST00000360001 LCE3AQ5TA76 89 aa9.04□□□□□ -0.96
SDF4-202ENST00000360001 CRCT1Q9UGL9 99 aa9.01□□□□□ -0.97
SDF4-202ENST00000360001 KMT2DO14686 5537 aa8.97□□□□□ -0.97
SDF4-202ENST00000360001 KRTAP4-8A0A0G2JLE6 195 aa8.9□□□□□ -0.98
SDF4-202ENST00000360001 KRTAP4-8Q9BYQ9 185 aa8.9□□□□□ -0.98
SDF4-202ENST00000360001 KRTAP8-1Q8IUC2 63 aa8.85□□□□□ -0.99
SDF4-202ENST00000360001 KRTAP12-3P60328 96 aa8.68□□□□□ -1.02
SDF4-202ENST00000360001 KRTAP19-5Q3LI72 72 aa8.68□□□□□ -1.02
SDF4-202ENST00000360001 MACF1Q9UPN3 7388 aaKnown RBP8.66□□□□□ -1.02
SDF4-202ENST00000360001 KRTAP9-6A0A140TA67 174 aa8.64□□□□□ -1.03
SDF4-202ENST00000360001 KRTAP19-7Q3SYF9 63 aa8.6□□□□□ -1.03
SDF4-202ENST00000360001 KRTAP15-1Q3LI76 137 aa8.48□□□□□ -1.05
SDF4-202ENST00000360001 MT1EP04732 61 aa8.44□□□□□ -1.06
SDF4-202ENST00000360001 SYNE2Q8WXH0 6885 aaKnown RBP8.39□□□□□ -1.07
SDF4-202ENST00000360001 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.35□□□□□ -1.07
SDF4-202ENST00000360001 MUC12Q9UKN1 5478 aa8.32□□□□□ -1.08
SDF4-202ENST00000360001 SPRR2FQ96RM1 72 aa8.31□□□□□ -1.08
SDF4-202ENST00000360001 MT1LQ93083 61 aa8.26□□□□□ -1.09
SDF4-202ENST00000360001 KRTAP5-9P26371 169 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms