RNA–Protein interactions for RNA: ENST00000358598.6

PRKAR1A-201, Transcript of protein kinase cAMP-dependent type I regulatory subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAR1A, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAR1A-201ENST00000358598 K7ERS5 55 aa5.7□□□□□ -1.5
PRKAR1A-201ENST00000358598 H1FX-AS1Q4G0G2 97 aa5.69□□□□□ -1.5
PRKAR1A-201ENST00000358598 FAT3Q8TDW7 4589 aa5.69□□□□□ -1.5
PRKAR1A-201ENST00000358598 KRTAP17-1Q9BYP8 105 aa5.68□□□□□ -1.5
PRKAR1A-201ENST00000358598 HSPG2P98160 4391 aa5.68□□□□□ -1.5
PRKAR1A-201ENST00000358598 S4R3F8 94 aa5.68□□□□□ -1.5
PRKAR1A-201ENST00000358598 RYR1P21817 5038 aa5.68□□□□□ -1.5
PRKAR1A-201ENST00000358598 J3QL48 77 aa5.67□□□□□ -1.5
PRKAR1A-201ENST00000358598 PKHD1L1Q86WI1 4243 aa5.66□□□□□ -1.5
PRKAR1A-201ENST00000358598 H0YAA0 97 aa5.66□□□□□ -1.5
PRKAR1A-201ENST00000358598 MT1HL1P0DM35 61 aa5.65□□□□□ -1.51
PRKAR1A-201ENST00000358598 KRTAP4-5Q9BYR2 181 aa5.59□□□□□ -1.51
PRKAR1A-201ENST00000358598 CSAG1Q6PB30 78 aa5.59□□□□□ -1.51
PRKAR1A-201ENST00000358598 CRIPTQ9P021 101 aa5.58□□□□□ -1.52
PRKAR1A-201ENST00000358598 TNXBP22105 4242 aa5.57□□□□□ -1.52
PRKAR1A-201ENST00000358598 LRP2P98164 4655 aa5.53□□□□□ -1.52
PRKAR1A-201ENST00000358598 TPRXLQ17RH7 258 aa5.53□□□□□ -1.52
PRKAR1A-201ENST00000358598 P0C880 135 aa5.52□□□□□ -1.53
PRKAR1A-201ENST00000358598 SPINT4Q6UDR6 99 aa5.52□□□□□ -1.53
PRKAR1A-201ENST00000358598 KRTAP3-3Q9BYR6 98 aa5.51□□□□□ -1.53
PRKAR1A-201ENST00000358598 LINC01554Q52M75 96 aa5.51□□□□□ -1.53
PRKAR1A-201ENST00000358598 BIRC6Q9NR09 4857 aa5.49□□□□□ -1.53
PRKAR1A-201ENST00000358598 SEC61BP60468 96 aaKnown RBP5.47□□□□□ -1.53
PRKAR1A-201ENST00000358598 KRTAP10-6P60371 365 aaPredicted RBP5.47□□□□□ -1.53
PRKAR1A-201ENST00000358598 KRTAP13-4Q3LI77 160 aa5.45□□□□□ -1.54
PRKAR1A-201ENST00000358598 LPAP08519 4548 aa5.45□□□□□ -1.54
PRKAR1A-201ENST00000358598 LCE2DQ5TA82 110 aaPredicted RBP5.43□□□□□ -1.54
PRKAR1A-201ENST00000358598 PCLOQ9Y6V0 5065 aa5.41□□□□□ -1.54
PRKAR1A-201ENST00000358598 KRTAP3-2Q9BYR7 98 aa5.41□□□□□ -1.54
PRKAR1A-201ENST00000358598 ABCA13Q86UQ4 5058 aa5.4□□□□□ -1.54
PRKAR1A-201ENST00000358598 ROMO1P60602 79 aa5.39□□□□□ -1.55
PRKAR1A-201ENST00000358598 M0QZ58 72 aa5.38□□□□□ -1.55
PRKAR1A-201ENST00000358598 R4GN34 69 aa5.37□□□□□ -1.55
PRKAR1A-201ENST00000358598 HERC2O95714 4834 aa5.37□□□□□ -1.55
PRKAR1A-201ENST00000358598 KRTAP25-1Q3LHN0 102 aa5.35□□□□□ -1.55
PRKAR1A-201ENST00000358598 KRTAP12-2P59991 146 aa5.31□□□□□ -1.56
PRKAR1A-201ENST00000358598 HERC1Q15751 4861 aa5.28□□□□□ -1.56
PRKAR1A-201ENST00000358598 C10orf95Q9H7T3 257 aa5.27□□□□□ -1.57
PRKAR1A-201ENST00000358598 KRTAP4-1Q9BYQ7 146 aa5.25□□□□□ -1.57
PRKAR1A-201ENST00000358598 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
PRKAR1A-201ENST00000358598 MUC2Q02817 5179 aa5.19□□□□□ -1.58
PRKAR1A-201ENST00000358598 CAMK2N1Q7Z7J9 78 aa5.17□□□□□ -1.58
PRKAR1A-201ENST00000358598 LORP23490 312 aaPredicted RBP5.15□□□□□ -1.58
PRKAR1A-201ENST00000358598 M0R2T5 61 aa5.15□□□□□ -1.59
PRKAR1A-201ENST00000358598 UBR4Q5T4S7 5183 aa5.1□□□□□ -1.59
PRKAR1A-201ENST00000358598 RNF213Q63HN8 5207 aa5.08□□□□□ -1.6
PRKAR1A-201ENST00000358598 MUC17Q685J3 4493 aa5.02□□□□□ -1.61
PRKAR1A-201ENST00000358598 FAT4Q6V0I7 4981 aa4.97□□□□□ -1.61
PRKAR1A-201ENST00000358598 KRTAP19-2Q3LHN2 52 aa4.94□□□□□ -1.62
PRKAR1A-201ENST00000358598 H3BS24 57 aa4.91□□□□□ -1.62
PRKAR1A-201ENST00000358598 HMCN2Q8NDA2 5059 aa4.91□□□□□ -1.62
PRKAR1A-201ENST00000358598 PLAC4Q8WY50 150 aa4.88□□□□□ -1.63
PRKAR1A-201ENST00000358598 FLGP20930 4061 aaPredicted RBP4.88□□□□□ -1.63
PRKAR1A-201ENST00000358598 KRTAP10-10P60014 251 aa4.87□□□□□ -1.63
PRKAR1A-201ENST00000358598 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
PRKAR1A-201ENST00000358598 FSIP2Q5CZC0 6907 aa4.84□□□□□ -1.64
PRKAR1A-201ENST00000358598 TNP1P09430 55 aa4.83□□□□□ -1.64
PRKAR1A-201ENST00000358598 LCE2CQ5TA81 110 aa4.78□□□□□ -1.64
PRKAR1A-201ENST00000358598 MT1HP80294 61 aa4.75□□□□□ -1.65
PRKAR1A-201ENST00000358598 KRTAP15-1Q3LI76 137 aa4.74□□□□□ -1.65
PRKAR1A-201ENST00000358598 PP632Q6XCG6 107 aa4.74□□□□□ -1.65
PRKAR1A-201ENST00000358598 LUZP6Q538Z0 58 aa4.68□□□□□ -1.66
PRKAR1A-201ENST00000358598 LCE2BO14633 110 aa4.67□□□□□ -1.66
PRKAR1A-201ENST00000358598 MT1FP04733 61 aa4.67□□□□□ -1.66
PRKAR1A-201ENST00000358598 MT2AP02795 61 aa4.66□□□□□ -1.66
PRKAR1A-201ENST00000358598 KRTAP19-1Q8IUB9 90 aa4.66□□□□□ -1.66
PRKAR1A-201ENST00000358598 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.67
PRKAR1A-201ENST00000358598 KRTAP9-8Q9BYQ0 159 aa4.57□□□□□ -1.68
PRKAR1A-201ENST00000358598 LCE3AQ5TA76 89 aa4.52□□□□□ -1.69
PRKAR1A-201ENST00000358598 MT1BP07438 61 aa4.43□□□□□ -1.7
PRKAR1A-201ENST00000358598 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
PRKAR1A-201ENST00000358598 PRO2289Q9P1D8 64 aa4.42□□□□□ -1.7
PRKAR1A-201ENST00000358598 KRTAP19-8Q3LI54 63 aa4.42□□□□□ -1.7
PRKAR1A-201ENST00000358598 LCE2AQ5TA79 106 aaPredicted RBP4.4□□□□□ -1.7
PRKAR1A-201ENST00000358598 KRTAP10-12P60413 245 aa4.4□□□□□ -1.71
PRKAR1A-201ENST00000358598 MT1XP80297 61 aa4.38□□□□□ -1.71
PRKAR1A-201ENST00000358598 KRTAP10-5P60370 271 aa4.38□□□□□ -1.71
PRKAR1A-201ENST00000358598 KRTAP9-3Q9BYQ3 159 aa4.38□□□□□ -1.71
PRKAR1A-201ENST00000358598 USH2AO75445 5202 aa4.37□□□□□ -1.71
PRKAR1A-201ENST00000358598 KRTAP9-2Q9BYQ4 174 aa4.34□□□□□ -1.71
PRKAR1A-201ENST00000358598 KRTAP10-7P60409 375 aaPredicted RBP4.33□□□□□ -1.72
PRKAR1A-201ENST00000358598 A0A0A0MQY5 61 aa4.32□□□□□ -1.72
PRKAR1A-201ENST00000358598 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
PRKAR1A-201ENST00000358598 KRTAP8-1Q8IUC2 63 aa4.27□□□□□ -1.73
PRKAR1A-201ENST00000358598 KMT2DO14686 5537 aa4.21□□□□□ -1.73
PRKAR1A-201ENST00000358598 SPRR5A0A1B0GTR4 108 aa4.17□□□□□ -1.74
PRKAR1A-201ENST00000358598 KRTAP9-6A0A140TA67 174 aa4.16□□□□□ -1.74
PRKAR1A-201ENST00000358598 KRTAP19-5Q3LI72 72 aa4.15□□□□□ -1.74
PRKAR1A-201ENST00000358598 KRTAP4-8A0A0G2JLE6 195 aa4.15□□□□□ -1.74
PRKAR1A-201ENST00000358598 KRTAP4-8Q9BYQ9 185 aa4.15□□□□□ -1.74
PRKAR1A-201ENST00000358598 CRCT1Q9UGL9 99 aa4.1□□□□□ -1.75
PRKAR1A-201ENST00000358598 LCE3CQ5T5A8 94 aa3.99□□□□□ -1.77
PRKAR1A-201ENST00000358598 SSPOA2VEC9 5147 aa3.95□□□□□ -1.78
PRKAR1A-201ENST00000358598 SYNE2Q8WXH0 6885 aaKnown RBP3.95□□□□□ -1.78
PRKAR1A-201ENST00000358598 KRTAP4-7Q9BYR0 210 aa3.93□□□□□ -1.78
PRKAR1A-201ENST00000358598 KRTAP19-7Q3SYF9 63 aa3.88□□□□□ -1.79
PRKAR1A-201ENST00000358598 MACF1Q9UPN3 7388 aaKnown RBP3.87□□□□□ -1.79
PRKAR1A-201ENST00000358598 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.79
PRKAR1A-201ENST00000358598 MT1EP04732 61 aa3.81□□□□□ -1.8
PRKAR1A-201ENST00000358598 MUC12Q9UKN1 5478 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms