RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 KRTAP15-1Q3LI76 137 aa5.27□□□□□ -1.57
SMARCAL1-202ENST00000358207 SPINT4Q6UDR6 99 aa5.27□□□□□ -1.57
SMARCAL1-202ENST00000358207 IGKV2-30P06310 120 aa5.24□□□□□ -1.57
SMARCAL1-202ENST00000358207 FAM229AH3BQW9 127 aa5.23□□□□□ -1.57
SMARCAL1-202ENST00000358207 SPINK1P00995 79 aa5.22□□□□□ -1.57
SMARCAL1-202ENST00000358207 SPINK6Q6UWN8 80 aa5.21□□□□□ -1.58
SMARCAL1-202ENST00000358207 DMBT1Q9UGM3 2413 aaPredicted RBP5.2□□□□□ -1.58
SMARCAL1-202ENST00000358207 TPRXLQ17RH7 258 aa5.2□□□□□ -1.58
SMARCAL1-202ENST00000358207 TNXBP22105 4242 aa5.19□□□□□ -1.58
SMARCAL1-202ENST00000358207 KRTAP13-1Q8IUC0 172 aa5.18□□□□□ -1.58
SMARCAL1-202ENST00000358207 TYMSOSQ8TAI1 123 aa5.17□□□□□ -1.58
SMARCAL1-202ENST00000358207 HMCN2Q8NDA2 5059 aa5.16□□□□□ -1.58
SMARCAL1-202ENST00000358207 LRP1Q07954 4544 aaKnown RBP5.15□□□□□ -1.58
SMARCAL1-202ENST00000358207 IGKV2D-30A0A075B6S6 120 aa5.14□□□□□ -1.59
SMARCAL1-202ENST00000358207 A0A1B0GU33 70 aa5.14□□□□□ -1.59
SMARCAL1-202ENST00000358207 HERC1Q15751 4861 aa5.12□□□□□ -1.59
SMARCAL1-202ENST00000358207 LUZP6Q538Z0 58 aa5.12□□□□□ -1.59
SMARCAL1-202ENST00000358207 C10orf95Q9H7T3 257 aa5.11□□□□□ -1.59
SMARCAL1-202ENST00000358207 H1FX-AS1Q4G0G2 97 aa5.1□□□□□ -1.59
SMARCAL1-202ENST00000358207 MT1HL1P0DM35 61 aa5.09□□□□□ -1.6
SMARCAL1-202ENST00000358207 KRTAP13-2Q52LG2 175 aa5.06□□□□□ -1.6
SMARCAL1-202ENST00000358207 J3QL48 77 aa5.05□□□□□ -1.6
SMARCAL1-202ENST00000358207 K7ERS5 55 aa5.04□□□□□ -1.6
SMARCAL1-202ENST00000358207 KRTAP1-4P0C5Y4 121 aa5.02□□□□□ -1.61
SMARCAL1-202ENST00000358207 KRTAP10-8P60410 259 aa5□□□□□ -1.61
SMARCAL1-202ENST00000358207 COX6B2Q6YFQ2 88 aa4.99□□□□□ -1.61
SMARCAL1-202ENST00000358207 MUC17Q685J3 4493 aa4.94□□□□□ -1.62
SMARCAL1-202ENST00000358207 RPL37P61927 97 aaKnown RBP4.92□□□□□ -1.62
SMARCAL1-202ENST00000358207 KRTAP3-1Q9BYR8 98 aa4.92□□□□□ -1.62
SMARCAL1-202ENST00000358207 C9orf92A6NGG3 77 aa4.89□□□□□ -1.63
SMARCAL1-202ENST00000358207 KRTAP13-4Q3LI77 160 aa4.89□□□□□ -1.63
SMARCAL1-202ENST00000358207 A0A0D9SG42 100 aa4.88□□□□□ -1.63
SMARCAL1-202ENST00000358207 SEC61BP60468 96 aaKnown RBP4.86□□□□□ -1.63
SMARCAL1-202ENST00000358207 LPAP08519 4548 aa4.81□□□□□ -1.64
SMARCAL1-202ENST00000358207 KRTAP10-6P60371 365 aaPredicted RBP4.81□□□□□ -1.64
SMARCAL1-202ENST00000358207 KRTAP3-2Q9BYR7 98 aa4.8□□□□□ -1.64
SMARCAL1-202ENST00000358207 UBR4Q5T4S7 5183 aa4.8□□□□□ -1.64
SMARCAL1-202ENST00000358207 RNF213Q63HN8 5207 aa4.79□□□□□ -1.64
SMARCAL1-202ENST00000358207 LRP2P98164 4655 aa4.78□□□□□ -1.64
SMARCAL1-202ENST00000358207 S4R3F8 94 aa4.76□□□□□ -1.65
SMARCAL1-202ENST00000358207 KRTAP12-2P59991 146 aa4.76□□□□□ -1.65
SMARCAL1-202ENST00000358207 XP32Q5T750 250 aa4.76□□□□□ -1.65
SMARCAL1-202ENST00000358207 LCE2AQ5TA79 106 aaPredicted RBP4.7□□□□□ -1.66
SMARCAL1-202ENST00000358207 PLAC4Q8WY50 150 aa4.69□□□□□ -1.66
SMARCAL1-202ENST00000358207 MUC2Q02817 5179 aa4.69□□□□□ -1.66
SMARCAL1-202ENST00000358207 RPS29P62273 56 aaKnown RBP4.67□□□□□ -1.66
SMARCAL1-202ENST00000358207 KRTAP3-3Q9BYR6 98 aa4.66□□□□□ -1.66
SMARCAL1-202ENST00000358207 KRTAP12-1P59990 96 aa4.65□□□□□ -1.66
SMARCAL1-202ENST00000358207 FAT4Q6V0I7 4981 aa4.59□□□□□ -1.67
SMARCAL1-202ENST00000358207 LCE2DQ5TA82 110 aaPredicted RBP4.58□□□□□ -1.68
SMARCAL1-202ENST00000358207 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
SMARCAL1-202ENST00000358207 CAMK2N1Q7Z7J9 78 aa4.47□□□□□ -1.69
SMARCAL1-202ENST00000358207 KRTAP9-6A0A140TA67 174 aa4.46□□□□□ -1.7
SMARCAL1-202ENST00000358207 KRTAP19-2Q3LHN2 52 aa4.44□□□□□ -1.7
SMARCAL1-202ENST00000358207 PRO2289Q9P1D8 64 aa4.42□□□□□ -1.7
SMARCAL1-202ENST00000358207 LCE2CQ5TA81 110 aa4.42□□□□□ -1.7
SMARCAL1-202ENST00000358207 KRTAP4-1Q9BYQ7 146 aa4.4□□□□□ -1.71
SMARCAL1-202ENST00000358207 M0QZ58 72 aa4.34□□□□□ -1.71
SMARCAL1-202ENST00000358207 FLGP20930 4061 aaPredicted RBP4.33□□□□□ -1.72
SMARCAL1-202ENST00000358207 MT1HP80294 61 aa4.31□□□□□ -1.72
SMARCAL1-202ENST00000358207 LORP23490 312 aaPredicted RBP4.31□□□□□ -1.72
SMARCAL1-202ENST00000358207 SPRR5A0A1B0GTR4 108 aa4.28□□□□□ -1.72
SMARCAL1-202ENST00000358207 CRCT1Q9UGL9 99 aa4.28□□□□□ -1.72
SMARCAL1-202ENST00000358207 R4GN34 69 aa4.26□□□□□ -1.73
SMARCAL1-202ENST00000358207 PP632Q6XCG6 107 aa4.23□□□□□ -1.73
SMARCAL1-202ENST00000358207 INE1O15225 51 aa4.16□□□□□ -1.74
SMARCAL1-202ENST00000358207 M0R2T5 61 aa4.13□□□□□ -1.75
SMARCAL1-202ENST00000358207 KRTAP9-8Q9BYQ0 159 aa4.1□□□□□ -1.75
SMARCAL1-202ENST00000358207 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.03□□□□□ -1.76
SMARCAL1-202ENST00000358207 LCE2BO14633 110 aa4.02□□□□□ -1.77
SMARCAL1-202ENST00000358207 FSIP2Q5CZC0 6907 aa4.02□□□□□ -1.77
SMARCAL1-202ENST00000358207 MT2AP02795 61 aa3.99□□□□□ -1.77
SMARCAL1-202ENST00000358207 KRTAP9-3Q9BYQ3 159 aa3.99□□□□□ -1.77
SMARCAL1-202ENST00000358207 USH2AO75445 5202 aa3.97□□□□□ -1.77
SMARCAL1-202ENST00000358207 KRTAP9-7A8MTY7 169 aa3.96□□□□□ -1.78
SMARCAL1-202ENST00000358207 KRTAP19-6Q3LI70 58 aa3.96□□□□□ -1.78
SMARCAL1-202ENST00000358207 SSPOA2VEC9 5147 aa3.93□□□□□ -1.78
SMARCAL1-202ENST00000358207 KRTAP23-1A1A580 65 aa3.93□□□□□ -1.78
SMARCAL1-202ENST00000358207 MT1FP04733 61 aa3.92□□□□□ -1.78
SMARCAL1-202ENST00000358207 KRTAP10-10P60014 251 aa3.92□□□□□ -1.78
SMARCAL1-202ENST00000358207 TNP1P09430 55 aa3.91□□□□□ -1.78
SMARCAL1-202ENST00000358207 KRTAP19-1Q8IUB9 90 aa3.9□□□□□ -1.79
SMARCAL1-202ENST00000358207 KRTAP6-3Q3LI67 103 aa3.84□□□□□ -1.79
SMARCAL1-202ENST00000358207 FCGBPQ9Y6R7 5405 aaPredicted RBP3.83□□□□□ -1.8
SMARCAL1-202ENST00000358207 KRTAP19-8Q3LI54 63 aa3.72□□□□□ -1.81
SMARCAL1-202ENST00000358207 LCE3AQ5TA76 89 aa3.72□□□□□ -1.81
SMARCAL1-202ENST00000358207 KMT2DO14686 5537 aa3.71□□□□□ -1.82
SMARCAL1-202ENST00000358207 SPRR2GQ9BYE4 73 aa3.68□□□□□ -1.82
SMARCAL1-202ENST00000358207 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
SMARCAL1-202ENST00000358207 NEBP20929 6669 aa3.63□□□□□ -1.83
SMARCAL1-202ENST00000358207 MT1BP07438 61 aa3.63□□□□□ -1.83
SMARCAL1-202ENST00000358207 KRTAP10-12P60413 245 aa3.63□□□□□ -1.83
SMARCAL1-202ENST00000358207 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
SMARCAL1-202ENST00000358207 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.83
SMARCAL1-202ENST00000358207 KRTAP8-1Q8IUC2 63 aa3.57□□□□□ -1.84
SMARCAL1-202ENST00000358207 MT1XP80297 61 aa3.52□□□□□ -1.85
SMARCAL1-202ENST00000358207 KRTAP20-1Q3LI63 56 aa3.5□□□□□ -1.85
SMARCAL1-202ENST00000358207 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
SMARCAL1-202ENST00000358207 KRTAP10-7P60409 375 aaPredicted RBP3.48□□□□□ -1.85
SMARCAL1-202ENST00000358207 KRTAP12-3P60328 96 aa3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms