RNA–Protein interactions for RNA: ENST00000357360.4

LAGE3-201, Transcript of L antigen family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAGE3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAGE3-201ENST00000357360 USH2AO75445 5202 aa11.8□□□□□ -0.52
LAGE3-201ENST00000357360 TRAV7A0A075B6U4 112 aa11.79□□□□□ -0.52
LAGE3-201ENST00000357360 LCE2BO14633 110 aa11.75□□□□□ -0.53
LAGE3-201ENST00000357360 KRTAP3-3Q9BYR6 98 aa11.74□□□□□ -0.53
LAGE3-201ENST00000357360 NDUFC1O43677 76 aa11.73□□□□□ -0.53
LAGE3-201ENST00000357360 SSPOA2VEC9 5147 aa11.7□□□□□ -0.54
LAGE3-201ENST00000357360 DMAC1Q96GE9 116 aa11.6□□□□□ -0.55
LAGE3-201ENST00000357360 SNURFQ9Y675 71 aa11.56□□□□□ -0.56
LAGE3-201ENST00000357360 SERP2Q8N6R1 65 aa11.53□□□□□ -0.56
LAGE3-201ENST00000357360 KRTAP19-1Q8IUB9 90 aa11.49□□□□□ -0.57
LAGE3-201ENST00000357360 C20orf197Q8N268 126 aa11.49□□□□□ -0.57
LAGE3-201ENST00000357360 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.48□□□□□ -0.57
LAGE3-201ENST00000357360 FCGBPQ9Y6R7 5405 aaPredicted RBP11.46□□□□□ -0.58
LAGE3-201ENST00000357360 ACYP2P14621 99 aa11.44□□□□□ -0.58
LAGE3-201ENST00000357360 ADM2Q7Z4H4 148 aa11.42□□□□□ -0.58
LAGE3-201ENST00000357360 H0YAA0 97 aa11.41□□□□□ -0.58
LAGE3-201ENST00000357360 CRIPTQ9P021 101 aa11.36□□□□□ -0.59
LAGE3-201ENST00000357360 KRTAP9-7A8MTY7 169 aa11.34□□□□□ -0.59
LAGE3-201ENST00000357360 SPRR2GQ9BYE4 73 aa11.34□□□□□ -0.59
LAGE3-201ENST00000357360 CHKB-CPT1BH3BT56 60 aa11.33□□□□□ -0.6
LAGE3-201ENST00000357360 KRTAP19-6Q3LI70 58 aa11.31□□□□□ -0.6
LAGE3-201ENST00000357360 Q5VV11 94 aa11.3□□□□□ -0.6
LAGE3-201ENST00000357360 SPANXA2-OT1Q8N9U9 137 aa11.28□□□□□ -0.6
LAGE3-201ENST00000357360 SPTSSBQ8NFR3 76 aa11.28□□□□□ -0.6
LAGE3-201ENST00000357360 COX7CP15954 63 aa11.27□□□□□ -0.61
LAGE3-201ENST00000357360 KRTAP19-8Q3LI54 63 aa11.2□□□□□ -0.62
LAGE3-201ENST00000357360 MT1BP07438 61 aa11.17□□□□□ -0.62
LAGE3-201ENST00000357360 P0C880 135 aa11.15□□□□□ -0.62
LAGE3-201ENST00000357360 ANAPC13Q9BS18 74 aa11.14□□□□□ -0.63
LAGE3-201ENST00000357360 R4GN34 69 aa11.12□□□□□ -0.63
LAGE3-201ENST00000357360 MACF1Q9UPN3 7388 aaKnown RBP11.09□□□□□ -0.63
LAGE3-201ENST00000357360 M0QZ58 72 aa11.05□□□□□ -0.64
LAGE3-201ENST00000357360 KRTAP3-2Q9BYR7 98 aa11.05□□□□□ -0.64
LAGE3-201ENST00000357360 A6NN06 94 aa11.01□□□□□ -0.65
LAGE3-201ENST00000357360 COA5Q86WW8 74 aa11.01□□□□□ -0.65
LAGE3-201ENST00000357360 CYSTM1Q9H1C7 97 aa11□□□□□ -0.65
LAGE3-201ENST00000357360 H7BZZ5 65 aa10.98□□□□□ -0.65
LAGE3-201ENST00000357360 SYNE2Q8WXH0 6885 aaKnown RBP10.94□□□□□ -0.66
LAGE3-201ENST00000357360 LINC01554Q52M75 96 aa10.93□□□□□ -0.66
LAGE3-201ENST00000357360 PLAC4Q8WY50 150 aa10.89□□□□□ -0.67
LAGE3-201ENST00000357360 CCDC179H3BU77 68 aa10.86□□□□□ -0.67
LAGE3-201ENST00000357360 KRTAP10-5P60370 271 aa10.85□□□□□ -0.67
LAGE3-201ENST00000357360 KRTAP6-3Q3LI67 103 aa10.76□□□□□ -0.69
LAGE3-201ENST00000357360 SEC61GP60059 68 aa10.75□□□□□ -0.69
LAGE3-201ENST00000357360 PRO2289Q9P1D8 64 aa10.7□□□□□ -0.7
LAGE3-201ENST00000357360 SERP1Q9Y6X1 66 aa10.7□□□□□ -0.7
LAGE3-201ENST00000357360 ATP5EP56381 51 aaPredicted RBP10.63□□□□□ -0.71
LAGE3-201ENST00000357360 MT1XP80297 61 aa10.57□□□□□ -0.72
LAGE3-201ENST00000357360 KRTAP13-4Q3LI77 160 aa10.54□□□□□ -0.72
LAGE3-201ENST00000357360 TMEM258P61165 79 aa10.48□□□□□ -0.73
LAGE3-201ENST00000357360 A0A1B0GU69 56 aa10.47□□□□□ -0.73
LAGE3-201ENST00000357360 A0A1B0GU33 70 aa10.45□□□□□ -0.74
LAGE3-201ENST00000357360 A0A0D9SG42 100 aa10.41□□□□□ -0.74
LAGE3-201ENST00000357360 SPATA8Q6RVD6 105 aa10.39□□□□□ -0.75
LAGE3-201ENST00000357360 CAMK2N1Q7Z7J9 78 aa10.33□□□□□ -0.76
LAGE3-201ENST00000357360 MUC12Q9UKN1 5478 aa10.3□□□□□ -0.76
LAGE3-201ENST00000357360 PRR15LQ9BU68 103 aa10.3□□□□□ -0.76
LAGE3-201ENST00000357360 NEBP20929 6669 aa10.29□□□□□ -0.76
LAGE3-201ENST00000357360 KRTAP5-9P26371 169 aa10.27□□□□□ -0.77
LAGE3-201ENST00000357360 SPINT4Q6UDR6 99 aa10.23□□□□□ -0.77
LAGE3-201ENST00000357360 KRTAP12-2P59991 146 aa10.22□□□□□ -0.77
LAGE3-201ENST00000357360 SMIM26A0A096LP01 95 aa10.19□□□□□ -0.78
LAGE3-201ENST00000357360 LINC01558Q9Y6Z2 57 aa10.17□□□□□ -0.78
LAGE3-201ENST00000357360 KRTAP10-7P60409 375 aaPredicted RBP10.13□□□□□ -0.79
LAGE3-201ENST00000357360 KRTAP8-1Q8IUC2 63 aa10.12□□□□□ -0.79
LAGE3-201ENST00000357360 KMT2DO14686 5537 aa10.1□□□□□ -0.79
LAGE3-201ENST00000357360 A8MU10 97 aa10.08□□□□□ -0.8
LAGE3-201ENST00000357360 KRTAP12-1P59990 96 aa10.07□□□□□ -0.8
LAGE3-201ENST00000357360 KRTAP10-12P60413 245 aa10.03□□□□□ -0.8
LAGE3-201ENST00000357360 SPRR2FQ96RM1 72 aa10.03□□□□□ -0.8
LAGE3-201ENST00000357360 MDN1Q9NU22 5596 aa10.02□□□□□ -0.8
LAGE3-201ENST00000357360 KRTAP4-8A0A0G2JLE6 195 aa10.01□□□□□ -0.81
LAGE3-201ENST00000357360 KRTAP4-8Q9BYQ9 185 aa10.01□□□□□ -0.81
LAGE3-201ENST00000357360 KRTAP20-1Q3LI63 56 aa9.94□□□□□ -0.82
LAGE3-201ENST00000357360 UQCR11O14957 56 aa9.91□□□□□ -0.82
LAGE3-201ENST00000357360 PCP4P48539 62 aa9.88□□□□□ -0.83
LAGE3-201ENST00000357360 V9GYY9 64 aa9.86□□□□□ -0.83
LAGE3-201ENST00000357360 SPRR2EP22531 72 aa9.81□□□□□ -0.84
LAGE3-201ENST00000357360 SPRR2BP35325 72 aa9.81□□□□□ -0.84
LAGE3-201ENST00000357360 SPRR2AP35326 72 aa9.81□□□□□ -0.84
LAGE3-201ENST00000357360 PSPHP1O15172 72 aa9.79□□□□□ -0.84
LAGE3-201ENST00000357360 MIR22HGQ0VDD5 57 aa9.74□□□□□ -0.85
LAGE3-201ENST00000357360 Q1T7F1 81 aa9.74□□□□□ -0.85
LAGE3-201ENST00000357360 KRTAP2-3P0C7H8 128 aa9.71□□□□□ -0.86
LAGE3-201ENST00000357360 KRTAP2-4Q9BYR9 128 aa9.71□□□□□ -0.86
LAGE3-201ENST00000357360 LCE1AQ5T7P2 110 aa9.66□□□□□ -0.86
LAGE3-201ENST00000357360 C10orf95Q9H7T3 257 aa9.59□□□□□ -0.87
LAGE3-201ENST00000357360 TNP1P09430 55 aa9.57□□□□□ -0.88
LAGE3-201ENST00000357360 K7ERS5 55 aa9.56□□□□□ -0.88
LAGE3-201ENST00000357360 RPS28P62857 69 aaKnown RBP9.53□□□□□ -0.88
LAGE3-201ENST00000357360 A6NED7 52 aa9.51□□□□□ -0.89
LAGE3-201ENST00000357360 SPRR2DP22532 72 aa9.48□□□□□ -0.89
LAGE3-201ENST00000357360 KRTAP19-7Q3SYF9 63 aa9.42□□□□□ -0.9
LAGE3-201ENST00000357360 KRTAP2-2Q9BYT5 123 aa9.41□□□□□ -0.9
LAGE3-201ENST00000357360 KRTAP2-1Q9BYU5 128 aa9.41□□□□□ -0.9
LAGE3-201ENST00000357360 MT1EP04732 61 aa9.36□□□□□ -0.91
LAGE3-201ENST00000357360 KRTAP19-5Q3LI72 72 aa9.36□□□□□ -0.91
LAGE3-201ENST00000357360 LCE3AQ5TA76 89 aa9.35□□□□□ -0.91
LAGE3-201ENST00000357360 KRTAP19-3Q7Z4W3 81 aa9.21□□□□□ -0.94
LAGE3-201ENST00000357360 LCE3BQ5TA77 95 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms